BLASTX nr result

ID: Coptis24_contig00027527 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027527
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318731.1| predicted protein [Populus trichocarpa] gi|2...   100   1e-19
prf||1407140B acetolactate synthase SuRB                              100   2e-19
sp|P09114.1|ILVB2_TOBAC RecName: Full=Acetolactate synthase 2, c...   100   2e-19
ref|XP_002322262.1| predicted protein [Populus trichocarpa] gi|2...    98   6e-19
prf||1407140A acetolactate synthase SuRA                               98   8e-19

>ref|XP_002318731.1| predicted protein [Populus trichocarpa] gi|222859404|gb|EEE96951.1|
           predicted protein [Populus trichocarpa]
          Length = 524

 Score =  100 bits (249), Expect = 1e-19
 Identities = 61/107 (57%), Positives = 69/107 (64%), Gaps = 13/107 (12%)
 Frame = -1

Query: 284 STISKPISYPFPNIQKP----NLKITLPILKNHQKT-TLHITNTLS--------TKTSQT 144
           ST + PI  P    + P     L +TLP   NH KT +LHI+N+LS        T +  T
Sbjct: 9   STSTAPIYRPPSPSKAPLPISTLTLTLPSTFNHTKTRSLHISNSLSKPISSTATTSSPTT 68

Query: 143 SKHFISRFPPDEPRKGADVLVEALEREGVTRVFAYPGGASLEIHQAL 3
            K    RF PDEPRKGAD+LVEALEREGVT VFAYPGGASLEIHQAL
Sbjct: 69  EKFSFPRFAPDEPRKGADILVEALEREGVTDVFAYPGGASLEIHQAL 115


>prf||1407140B acetolactate synthase SuRB
          Length = 664

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 60/113 (53%), Positives = 77/113 (68%), Gaps = 8/113 (7%)
 Frame = -1

Query: 317 NKHSTMATSKLSTISKPISYPFPN----IQKPNLKITLPILKNHQKTTLHITNTLST--K 156
           +K  + ++SK ST+    ++PFP+       P L +T P   + Q+    I+N +ST  K
Sbjct: 13  SKTLSSSSSKSSTLLPRSTFPFPHHPHKTTPPPLHLT-PTHIHSQRRRFTISNVISTTQK 71

Query: 155 TSQTSKH--FISRFPPDEPRKGADVLVEALEREGVTRVFAYPGGASLEIHQAL 3
            S+T K   F+SRF PDEPRKG+DVLVEALEREGVT VFAYPGGAS+EIHQAL
Sbjct: 72  VSETQKAETFVSRFAPDEPRKGSDVLVEALEREGVTDVFAYPGGASMEIHQAL 124


>sp|P09114.1|ILVB2_TOBAC RecName: Full=Acetolactate synthase 2, chloroplastic; AltName:
           Full=ALS II; AltName: Full=Acetohydroxy-acid synthase
           II; AltName: Full=Acetolactate synthase II; Flags:
           Precursor gi|19779|emb|CAA30485.1| unnamed protein
           product [Nicotiana tabacum] gi|224566930|gb|ACN56756.1|
           SuRB [Nicotiana tabacum]
          Length = 664

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 60/113 (53%), Positives = 77/113 (68%), Gaps = 8/113 (7%)
 Frame = -1

Query: 317 NKHSTMATSKLSTISKPISYPFPN----IQKPNLKITLPILKNHQKTTLHITNTLST--K 156
           +K  + ++SK ST+    ++PFP+       P L +T P   + Q+    I+N +ST  K
Sbjct: 13  SKTLSSSSSKSSTLLPRSTFPFPHHPHKTTPPPLHLT-PTHIHSQRRRFTISNVISTTQK 71

Query: 155 TSQTSKH--FISRFPPDEPRKGADVLVEALEREGVTRVFAYPGGASLEIHQAL 3
            S+T K   F+SRF PDEPRKG+DVLVEALEREGVT VFAYPGGAS+EIHQAL
Sbjct: 72  VSETQKAETFVSRFAPDEPRKGSDVLVEALEREGVTDVFAYPGGASMEIHQAL 124


>ref|XP_002322262.1| predicted protein [Populus trichocarpa] gi|222869258|gb|EEF06389.1|
           predicted protein [Populus trichocarpa]
          Length = 650

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 58/107 (54%), Positives = 68/107 (63%), Gaps = 8/107 (7%)
 Frame = -1

Query: 299 ATSKLSTISKPISYPFPNIQKPNLKITLPILKNHQKT-TLHITNTLSTKTSQTS------ 141
           A +  ST + PI  P      P  K TLP   N +K  +LHI+N+LS   S T+      
Sbjct: 4   AAAATSTSTTPIRKPSSIYPLPISKFTLPFAFNPKKPCSLHISNSLSKPASTTTASPATT 63

Query: 140 -KHFISRFPPDEPRKGADVLVEALEREGVTRVFAYPGGASLEIHQAL 3
            K   SRF PD+PRKGAD+LVEALEREGV  VFAYPGGAS+EIHQAL
Sbjct: 64  EKFSFSRFAPDQPRKGADILVEALEREGVKDVFAYPGGASMEIHQAL 110


>prf||1407140A acetolactate synthase SuRA
          Length = 667

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 60/114 (52%), Positives = 76/114 (66%), Gaps = 9/114 (7%)
 Frame = -1

Query: 317 NKHSTMATSKLSTISKPISYPFPN----IQKPNLKITLPILKNH-QKTTLHITNTLST-- 159
           +K  + ++S  ST+    ++PFP+       P L +T   +  H Q+    I+N +ST  
Sbjct: 14  SKTLSPSSSTSSTLLPRSTFPFPHHPHKTTPPPLHLTHTHIHIHSQRRRFTISNVISTNQ 73

Query: 158 KTSQTSKH--FISRFPPDEPRKGADVLVEALEREGVTRVFAYPGGASLEIHQAL 3
           K SQT K   F+SRF PDEPRKG+DVLVEALEREGVT VFAYPGGAS+EIHQAL
Sbjct: 74  KVSQTEKTETFVSRFAPDEPRKGSDVLVEALEREGVTDVFAYPGGASMEIHQAL 127


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