BLASTX nr result
ID: Coptis24_contig00027514
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00027514 (1110 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003634243.1| PREDICTED: U-box domain-containing protein 5... 258 2e-66 ref|XP_002511332.1| ATP binding protein, putative [Ricinus commu... 248 1e-63 ref|XP_004138091.1| PREDICTED: U-box domain-containing protein 5... 248 3e-63 ref|XP_002318666.1| predicted protein [Populus trichocarpa] gi|2... 233 6e-59 ref|XP_002322197.1| predicted protein [Populus trichocarpa] gi|2... 231 3e-58 >ref|XP_003634243.1| PREDICTED: U-box domain-containing protein 54-like [Vitis vinifera] gi|297733717|emb|CBI14964.3| unnamed protein product [Vitis vinifera] Length = 240 Score = 258 bits (659), Expect = 2e-66 Identities = 141/240 (58%), Positives = 172/240 (71%), Gaps = 5/240 (2%) Frame = -1 Query: 951 MEERNSGRWSEEGQFQNGHFDVMSPEIVEIDE-SKSFASSRDAG-NSVYVAVGKEDLDVL 778 MEE N + +EE Q+Q+ + SPEIVEI E SKSF SSR+ G VYVAVG++DLDVL Sbjct: 1 MEEENYKKQAEEWQYQS--MPMKSPEIVEIGEDSKSFTSSREGGFKDVYVAVGRDDLDVL 58 Query: 777 KWALNHAVMPGNCVFLIHVFPPVNYIPTPVGKMLRSQAGQEQVNCYXXXXXXXXXXXLQK 598 KWAL+H+V P +FL+HVFPP YI TPVG++ RSQ +EQ+ Y LQK Sbjct: 59 KWALDHSVSPQARIFLVHVFPPQTYISTPVGRLSRSQLSKEQLKVYINEENNRRRNLLQK 118 Query: 597 YVRLCDDAKVTVETMLIESTQTAKAILELIPVLNITMLVMGTKR-PASRILRMGMGKGEF 421 Y+RLC DAKVTV+TML+ES T KAIL+LIPVLNIT LV+GTKR P R +G GEF Sbjct: 119 YIRLCTDAKVTVDTMLLESNTTTKAILDLIPVLNITNLVIGTKRPPCPRRSWKKLGTGEF 178 Query: 420 VQKNAPDFCEVAIVCDGKKVLEGQQV--VLEKSPESNRRGAGVTRHPERNFFDCVCFSGK 247 +QKNAP+FCEV IV DGKKVL+G+QV ++ SP S+ R TR+ ERNFF+C CFSGK Sbjct: 179 IQKNAPEFCEVTIVFDGKKVLDGEQVGELVHSSPASSHRKPETTRNSERNFFECACFSGK 238 >ref|XP_002511332.1| ATP binding protein, putative [Ricinus communis] gi|223550447|gb|EEF51934.1| ATP binding protein, putative [Ricinus communis] Length = 315 Score = 248 bits (634), Expect = 1e-63 Identities = 133/218 (61%), Positives = 162/218 (74%), Gaps = 4/218 (1%) Frame = -1 Query: 888 VMSPEIVEI-DESKSFASSRDAGN--SVYVAVGKEDLDVLKWALNHAVMPGNCVFLIHVF 718 +MS EIVEI D+S+S ASSRD G VYVAVGK+DL VLKWAL+ AV PG VFL+HVF Sbjct: 23 IMSSEIVEIGDDSRSIASSRDGGCFLDVYVAVGKDDLHVLKWALDRAVSPGTRVFLVHVF 82 Query: 717 PPVNYIPTPVGKMLRSQAGQEQVNCYXXXXXXXXXXXLQKYVRLCDDAKVTVETMLIEST 538 PP+ YIPTPVG++ RSQ Q+QV Y LQKY+RLC+DAKVTV+TMLIES Sbjct: 83 PPITYIPTPVGRLSRSQLSQDQVRFYINEEHNRRRSILQKYIRLCNDAKVTVDTMLIESN 142 Query: 537 QTAKAILELIPVLNITMLVMGTKR-PASRILRMGMGKGEFVQKNAPDFCEVAIVCDGKKV 361 +TAKAIL+LIPVLNIT LVMGT R P SR+LR + K EFV+KNAPD+CEV +V D KK+ Sbjct: 143 ETAKAILDLIPVLNITNLVMGTTRPPRSRLLRKRLAKAEFVKKNAPDYCEVTVVHDEKKI 202 Query: 360 LEGQQVVLEKSPESNRRGAGVTRHPERNFFDCVCFSGK 247 E ++VV S S+ R +TR+ +R FF+CVCFS + Sbjct: 203 AESKEVV-HSSLSSSTRRPDITRNSDRKFFECVCFSSR 239 >ref|XP_004138091.1| PREDICTED: U-box domain-containing protein 52-like [Cucumis sativus] gi|449522187|ref|XP_004168109.1| PREDICTED: U-box domain-containing protein 52-like [Cucumis sativus] Length = 239 Score = 248 bits (632), Expect = 3e-63 Identities = 140/242 (57%), Positives = 171/242 (70%), Gaps = 5/242 (2%) Frame = -1 Query: 951 MEERNSGRWSEEGQFQNGHFDVMSPEIVEI-DESKSFASSRDAG-NSVYVAVGKEDLDVL 778 MEE GR + E Q Q +MSPEIVEI DESK+ SSRD G VYVAVGK+D+DVL Sbjct: 1 MEEEFQGR-ATELQLQCYSARIMSPEIVEIGDESKTIISSRDGGATDVYVAVGKDDIDVL 59 Query: 777 KWALNHAVMPGNCVFLIHVFPPVNYIPTPVGKMLRSQAGQEQVNCYXXXXXXXXXXXLQK 598 KWAL+HAV PG CVFL+HVFPP+ YIPTPVG++ RSQ QEQ+ Y LQK Sbjct: 60 KWALDHAVSPGCCVFLLHVFPPLTYIPTPVGRLARSQLSQEQLRVYINEENNRRRNLLQK 119 Query: 597 YVRLCDDAKVTVETMLIESTQTAKAILELIPVLNITMLVMGTKRP-ASRILRMGMGKGEF 421 Y+RLC DAKVTV+T+L+ES TAKAIL+LIPVLNIT LV+GTK+P +S++L M KGEF Sbjct: 120 YIRLCTDAKVTVDTLLLESNTTAKAILQLIPVLNITNLVIGTKKPLSSKLLGKRMTKGEF 179 Query: 420 VQKNAPDFCEVAIVCDGKKVLEGQQV--VLEKSPESNRRGAGVTRHPERNFFDCVCFSGK 247 V+KNAP++CEV +V +GKKV E QQ +L S +S R + +N F+CVC S K Sbjct: 180 VKKNAPEYCEVTVVYEGKKVNECQQEMGLLPSSKDSGLR----QQRSGKNLFECVCLSSK 235 Query: 246 DS 241 S Sbjct: 236 SS 237 >ref|XP_002318666.1| predicted protein [Populus trichocarpa] gi|222859339|gb|EEE96886.1| predicted protein [Populus trichocarpa] Length = 234 Score = 233 bits (594), Expect = 6e-59 Identities = 126/217 (58%), Positives = 155/217 (71%), Gaps = 3/217 (1%) Frame = -1 Query: 888 VMSPEIVEIDES-KSFASSRDA-GNSVYVAVGKEDLDVLKWALNHAVMPGNCVFLIHVFP 715 +MSPEIVEI E K ++S D + VYVAVGK D DVLKWAL+HAV+PG VFL+HVFP Sbjct: 18 IMSPEIVEIGEDIKPISNSIDGVSHDVYVAVGKNDTDVLKWALDHAVLPGARVFLVHVFP 77 Query: 714 PVNYIPTPVGKMLRSQAGQEQVNCYXXXXXXXXXXXLQKYVRLCDDAKVTVETMLIESTQ 535 P+ YIPTPVG++ RSQ Q+Q+ Y LQKY+ LC DAKVTV+TML+ES Sbjct: 78 PLTYIPTPVGRLSRSQLSQDQMRFYINEENNRRRNHLQKYISLCADAKVTVDTMLLESNS 137 Query: 534 TAKAILELIPVLNITMLVMGTKR-PASRILRMGMGKGEFVQKNAPDFCEVAIVCDGKKVL 358 TAKAILELIPVLNI LVMGTKR P SR+LR + KGEFV+KNAPD+CEV+I+ + KK++ Sbjct: 138 TAKAILELIPVLNIRHLVMGTKRLPRSRLLRKKLAKGEFVKKNAPDYCEVSIIHESKKIM 197 Query: 357 EGQQVVLEKSPESNRRGAGVTRHPERNFFDCVCFSGK 247 +GQ + S R V R+ E+ FF+ CFSGK Sbjct: 198 DGQHGIEPVSSCPQR--PDVIRNSEKKFFELACFSGK 232 >ref|XP_002322197.1| predicted protein [Populus trichocarpa] gi|222869193|gb|EEF06324.1| predicted protein [Populus trichocarpa] Length = 236 Score = 231 bits (588), Expect = 3e-58 Identities = 126/217 (58%), Positives = 155/217 (71%), Gaps = 3/217 (1%) Frame = -1 Query: 888 VMSPEIVEI-DESKSFASSRDAGNS-VYVAVGKEDLDVLKWALNHAVMPGNCVFLIHVFP 715 +MSPEIVEI D+SK+ +S D N VYVAVGK D DVLKWAL+HAV PG VFL+HVFP Sbjct: 18 IMSPEIVEIGDDSKTITNSIDGINDDVYVAVGKNDTDVLKWALDHAVSPGARVFLVHVFP 77 Query: 714 PVNYIPTPVGKMLRSQAGQEQVNCYXXXXXXXXXXXLQKYVRLCDDAKVTVETMLIESTQ 535 P++YIPTPVG++ RSQ Q+QV Y LQKY+RLC +AKVTV+TML+ES Sbjct: 78 PLSYIPTPVGRLSRSQLSQDQVRFYINEENNRRRNQLQKYIRLCANAKVTVDTMLLESNL 137 Query: 534 TAKAILELIPVLNITMLVMGTKR-PASRILRMGMGKGEFVQKNAPDFCEVAIVCDGKKVL 358 TAK ILELIPVLNIT LVMG KR P SR+LR +GKGEFV+K APD+CEV+I+ +GKK++ Sbjct: 138 TAKTILELIPVLNITHLVMGNKRLPRSRLLRKKLGKGEFVKKKAPDYCEVSIIHNGKKIM 197 Query: 357 EGQQVVLEKSPESNRRGAGVTRHPERNFFDCVCFSGK 247 +G+ + + S R V R FF+ CF GK Sbjct: 198 DGKDGI--EPVSSCARRPDVIRSSANKFFNLPCFPGK 232