BLASTX nr result

ID: Coptis24_contig00027508 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027508
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270442.2| PREDICTED: mitochondrial substrate carrier f...   193   1e-47
emb|CAN71674.1| hypothetical protein VITISV_044359 [Vitis vinifera]   191   4e-47
ref|XP_002520699.1| Mitochondrial uncoupling protein, putative [...   176   2e-42
ref|XP_003518947.1| PREDICTED: mitochondrial substrate carrier f...   176   2e-42
ref|XP_002320376.1| predicted protein [Populus trichocarpa] gi|2...   174   7e-42

>ref|XP_002270442.2| PREDICTED: mitochondrial substrate carrier family protein ucpB-like
           [Vitis vinifera] gi|296086640|emb|CBI32275.3| unnamed
           protein product [Vitis vinifera]
          Length = 311

 Score =  193 bits (490), Expect = 1e-47
 Identities = 93/128 (72%), Positives = 110/128 (85%)
 Frame = -2

Query: 386 SGSMKPEKKLKLTTISPSYVVYHFGTSGIAVAAATAVTHPLDVLKVRLQMQLVGQKGPLT 207
           SGSMK E K +   +SPS  VYHFG SGI+VA ATA+THPLDVLKVRLQMQLVG +GPL 
Sbjct: 11  SGSMK-ENKSRNWALSPSNAVYHFGASGISVATATAITHPLDVLKVRLQMQLVGGRGPLN 69

Query: 206 GMGKVFAQMVKNEGPRAMYLGLVPALTRSVSYGGLRLGLYEPTKYFCDWAFGSSNVLLKV 27
           GMG++F ++VK EGP+++YLGL+PALTRSV YGGLRLGLYEP+KY C WAFGS+N+LLK+
Sbjct: 70  GMGRIFVEVVKKEGPKSLYLGLMPALTRSVLYGGLRLGLYEPSKYVCKWAFGSTNLLLKI 129

Query: 26  ASGAFSGA 3
           ASG FSGA
Sbjct: 130 ASGVFSGA 137


>emb|CAN71674.1| hypothetical protein VITISV_044359 [Vitis vinifera]
          Length = 433

 Score =  191 bits (486), Expect = 4e-47
 Identities = 92/128 (71%), Positives = 109/128 (85%)
 Frame = -2

Query: 386 SGSMKPEKKLKLTTISPSYVVYHFGTSGIAVAAATAVTHPLDVLKVRLQMQLVGQKGPLT 207
           SGSMK  K  +   +SPS  VYHFG SGI+VA ATA+THPLDVLKVRLQMQLVG +GPL 
Sbjct: 77  SGSMKXNKS-RNWALSPSNAVYHFGASGISVATATAITHPLDVLKVRLQMQLVGGRGPLN 135

Query: 206 GMGKVFAQMVKNEGPRAMYLGLVPALTRSVSYGGLRLGLYEPTKYFCDWAFGSSNVLLKV 27
           GMG++F ++VK EGP+++YLGL+PALTRSV YGGLRLGLYEP+KY C WAFGS+N+LLK+
Sbjct: 136 GMGRIFVEVVKKEGPKSLYLGLMPALTRSVLYGGLRLGLYEPSKYVCKWAFGSTNLLLKI 195

Query: 26  ASGAFSGA 3
           ASG FSGA
Sbjct: 196 ASGVFSGA 203


>ref|XP_002520699.1| Mitochondrial uncoupling protein, putative [Ricinus communis]
           gi|223540084|gb|EEF41661.1| Mitochondrial uncoupling
           protein, putative [Ricinus communis]
          Length = 206

 Score =  176 bits (446), Expect = 2e-42
 Identities = 83/113 (73%), Positives = 97/113 (85%)
 Frame = -2

Query: 341 SPSYVVYHFGTSGIAVAAATAVTHPLDVLKVRLQMQLVGQKGPLTGMGKVFAQMVKNEGP 162
           SPS V YHF TSG +VA AT  THPLDVLKVRLQMQLVGQ+GPL GMG +F Q++KNEGP
Sbjct: 21  SPSKVFYHFATSGASVAVATGFTHPLDVLKVRLQMQLVGQRGPLIGMGSLFVQVLKNEGP 80

Query: 161 RAMYLGLVPALTRSVSYGGLRLGLYEPTKYFCDWAFGSSNVLLKVASGAFSGA 3
           +A+YLGL PALTRS+ YGGLRLGLYEP+KY C+  FGSSN+ +K+ASGAF+GA
Sbjct: 81  KALYLGLTPALTRSLLYGGLRLGLYEPSKYACNLVFGSSNIFVKIASGAFAGA 133



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 37/104 (35%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
 Frame = -2

Query: 383 GSMKPEKKLKLTTISPSYVVYHFGTSGIAVAAATAVTHPLDVLKVRLQMQLVG-QKGPLT 207
           G  +P K         S +     +   A A ATA+T+P++VLKVRLQM     Q GP+ 
Sbjct: 103 GLYEPSKYACNLVFGSSNIFVKIASGAFAGAIATALTNPVEVLKVRLQMNTNRIQVGPIA 162

Query: 206 GMGKVFAQMVKNEGPRAMYLGLVPALTRSVSYGGLRLGLYEPTK 75
            M K+    V  EG RA++ G+ PA  R+ +    +L  Y+ TK
Sbjct: 163 EMRKI----VSEEGIRALWKGVGPATARAAALTASQLATYDETK 202


>ref|XP_003518947.1| PREDICTED: mitochondrial substrate carrier family protein ucpB-like
           [Glycine max]
          Length = 313

 Score =  176 bits (445), Expect = 2e-42
 Identities = 85/113 (75%), Positives = 97/113 (85%)
 Frame = -2

Query: 341 SPSYVVYHFGTSGIAVAAATAVTHPLDVLKVRLQMQLVGQKGPLTGMGKVFAQMVKNEGP 162
           SPS V  HF TSG++VA ATA+THPLDVLKVRLQMQLVGQ GPL+GMGK+F   VKNEGP
Sbjct: 26  SPSTVFNHFATSGLSVAVATAITHPLDVLKVRLQMQLVGQTGPLSGMGKLFLSAVKNEGP 85

Query: 161 RAMYLGLVPALTRSVSYGGLRLGLYEPTKYFCDWAFGSSNVLLKVASGAFSGA 3
           +++Y GL PALTRS  YGGLRLGLYEP+KY CD AFGSSNVL+K+ASG F+GA
Sbjct: 86  KSLYQGLTPALTRSFVYGGLRLGLYEPSKYACDLAFGSSNVLVKIASGMFAGA 138


>ref|XP_002320376.1| predicted protein [Populus trichocarpa] gi|222861149|gb|EEE98691.1|
           predicted protein [Populus trichocarpa]
          Length = 281

 Score =  174 bits (441), Expect = 7e-42
 Identities = 83/111 (74%), Positives = 100/111 (90%)
 Frame = -2

Query: 335 SYVVYHFGTSGIAVAAATAVTHPLDVLKVRLQMQLVGQKGPLTGMGKVFAQMVKNEGPRA 156
           S +V HF TSG++VA ATA+THPLDVLKVRLQMQLVG++GPLTGMG+V  Q++K EGP+A
Sbjct: 1   SQMVSHFATSGLSVAVATAITHPLDVLKVRLQMQLVGRRGPLTGMGQVAVQVLKKEGPKA 60

Query: 155 MYLGLVPALTRSVSYGGLRLGLYEPTKYFCDWAFGSSNVLLKVASGAFSGA 3
           +YLGL+PAL RSV YGGLRLGLYEP+KY C+ AFGS+N+LLK+ASGAFSGA
Sbjct: 61  LYLGLMPALIRSVLYGGLRLGLYEPSKYACNLAFGSTNILLKIASGAFSGA 111


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