BLASTX nr result

ID: Coptis24_contig00027499 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027499
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26731.3| unnamed protein product [Vitis vinifera]              196   2e-48
ref|XP_002276411.1| PREDICTED: uncharacterized protein LOC100246...   196   2e-48
emb|CAN75217.1| hypothetical protein VITISV_003518 [Vitis vinifera]   196   2e-48
ref|XP_002300355.1| predicted protein [Populus trichocarpa] gi|2...   190   1e-46
ref|XP_003600250.1| Nucleotide-binding oligomerization domain-co...   187   6e-46

>emb|CBI26731.3| unnamed protein product [Vitis vinifera]
          Length = 1147

 Score =  196 bits (497), Expect = 2e-48
 Identities = 95/123 (77%), Positives = 105/123 (85%)
 Frame = -3

Query: 369 QHEFYTLHDLMFPGHGSASCFLIISSLFRKPQNREQKNPAEIEEDLLYWLRFIVSNSKRA 190
           QHEFY+LHDLMFPGHGSAS FLI+SSLFRKP NRE K PAEIEEDL YWLRFIVSNS+RA
Sbjct: 517 QHEFYSLHDLMFPGHGSASFFLIVSSLFRKPTNRESKTPAEIEEDLQYWLRFIVSNSRRA 576

Query: 189 GPQAMLPSVTVVLTHFDKITQSSDSFQITIRLIRSLRERFQGFVEFYSTVFTVDARSSGS 10
             Q MLP+VTVVLTH+DKI Q S  FQ T+  I+ LR++FQGFV+FY TVFTVDARSS S
Sbjct: 577 AQQCMLPNVTVVLTHYDKINQPSQDFQATVNSIQRLRDKFQGFVDFYPTVFTVDARSSAS 636

Query: 9   VSK 1
           VSK
Sbjct: 637 VSK 639


>ref|XP_002276411.1| PREDICTED: uncharacterized protein LOC100246876 [Vitis vinifera]
          Length = 1386

 Score =  196 bits (497), Expect = 2e-48
 Identities = 95/123 (77%), Positives = 105/123 (85%)
 Frame = -3

Query: 369 QHEFYTLHDLMFPGHGSASCFLIISSLFRKPQNREQKNPAEIEEDLLYWLRFIVSNSKRA 190
           QHEFY+LHDLMFPGHGSAS FLI+SSLFRKP NRE K PAEIEEDL YWLRFIVSNS+RA
Sbjct: 561 QHEFYSLHDLMFPGHGSASFFLIVSSLFRKPTNRESKTPAEIEEDLQYWLRFIVSNSRRA 620

Query: 189 GPQAMLPSVTVVLTHFDKITQSSDSFQITIRLIRSLRERFQGFVEFYSTVFTVDARSSGS 10
             Q MLP+VTVVLTH+DKI Q S  FQ T+  I+ LR++FQGFV+FY TVFTVDARSS S
Sbjct: 621 AQQCMLPNVTVVLTHYDKINQPSQDFQATVNSIQRLRDKFQGFVDFYPTVFTVDARSSAS 680

Query: 9   VSK 1
           VSK
Sbjct: 681 VSK 683


>emb|CAN75217.1| hypothetical protein VITISV_003518 [Vitis vinifera]
          Length = 1400

 Score =  196 bits (497), Expect = 2e-48
 Identities = 95/123 (77%), Positives = 105/123 (85%)
 Frame = -3

Query: 369 QHEFYTLHDLMFPGHGSASCFLIISSLFRKPQNREQKNPAEIEEDLLYWLRFIVSNSKRA 190
           QHEFY+LHDLMFPGHGSAS FLI+SSLFRKP NRE K PAEIEEDL YWLRFIVSNS+RA
Sbjct: 572 QHEFYSLHDLMFPGHGSASFFLIVSSLFRKPTNRESKTPAEIEEDLQYWLRFIVSNSRRA 631

Query: 189 GPQAMLPSVTVVLTHFDKITQSSDSFQITIRLIRSLRERFQGFVEFYSTVFTVDARSSGS 10
             Q MLP+VTVVLTH+DKI Q S  FQ T+  I+ LR++FQGFV+FY TVFTVDARSS S
Sbjct: 632 AQQCMLPNVTVVLTHYDKINQPSQDFQATVNSIQRLRDKFQGFVDFYPTVFTVDARSSAS 691

Query: 9   VSK 1
           VSK
Sbjct: 692 VSK 694


>ref|XP_002300355.1| predicted protein [Populus trichocarpa] gi|222847613|gb|EEE85160.1|
           predicted protein [Populus trichocarpa]
          Length = 1404

 Score =  190 bits (482), Expect = 1e-46
 Identities = 91/123 (73%), Positives = 105/123 (85%)
 Frame = -3

Query: 369 QHEFYTLHDLMFPGHGSASCFLIISSLFRKPQNREQKNPAEIEEDLLYWLRFIVSNSKRA 190
           QH+FY+LHDLMFPGHGSAS FLIISSLFRKP NRE K PAEIEEDL YWLRFIVSNS+RA
Sbjct: 563 QHDFYSLHDLMFPGHGSASFFLIISSLFRKPNNREPKTPAEIEEDLQYWLRFIVSNSRRA 622

Query: 189 GPQAMLPSVTVVLTHFDKITQSSDSFQITIRLIRSLRERFQGFVEFYSTVFTVDARSSGS 10
             Q MLP+VT+VLTHFDKI Q S + Q+ +  I+ +R++FQGF++FY TVFTVDARSS S
Sbjct: 623 LQQCMLPNVTIVLTHFDKINQPSQNLQLAVNSIQRVRDKFQGFIDFYPTVFTVDARSSAS 682

Query: 9   VSK 1
           VSK
Sbjct: 683 VSK 685


>ref|XP_003600250.1| Nucleotide-binding oligomerization domain-containing protein
           [Medicago truncatula] gi|355489298|gb|AES70501.1|
           Nucleotide-binding oligomerization domain-containing
           protein [Medicago truncatula]
          Length = 1380

 Score =  187 bits (476), Expect = 6e-46
 Identities = 92/123 (74%), Positives = 104/123 (84%)
 Frame = -3

Query: 369 QHEFYTLHDLMFPGHGSASCFLIISSLFRKPQNREQKNPAEIEEDLLYWLRFIVSNSKRA 190
           QHEF++LHDLMFPG GSAS F+IISSLFRKP NRE K+ AEIEEDL YWLRFIVSNSKRA
Sbjct: 564 QHEFFSLHDLMFPGSGSASIFIIISSLFRKPSNREPKSTAEIEEDLQYWLRFIVSNSKRA 623

Query: 189 GPQAMLPSVTVVLTHFDKITQSSDSFQITIRLIRSLRERFQGFVEFYSTVFTVDARSSGS 10
           G Q MLPSV +VLTHFDKI QSS + Q T+  I+ LR++FQG+V+FY TVFTVDARSS S
Sbjct: 624 GQQCMLPSVAIVLTHFDKINQSSQNLQQTVDSIQRLRDKFQGYVDFYQTVFTVDARSSAS 683

Query: 9   VSK 1
           V K
Sbjct: 684 VGK 686


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