BLASTX nr result

ID: Coptis24_contig00027492 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027492
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279145.2| PREDICTED: uncharacterized protein LOC100256...   124   1e-26
emb|CBI16878.3| unnamed protein product [Vitis vinifera]              124   1e-26
gb|ABK94444.1| unknown [Populus trichocarpa]                          120   9e-26
ref|XP_002305970.1| predicted protein [Populus trichocarpa] gi|2...   120   1e-25
ref|XP_004145658.1| PREDICTED: uncharacterized protein LOC101213...   116   2e-24

>ref|XP_002279145.2| PREDICTED: uncharacterized protein LOC100256612 [Vitis vinifera]
          Length = 503

 Score =  124 bits (310), Expect = 1e-26
 Identities = 55/92 (59%), Positives = 68/92 (73%), Gaps = 4/92 (4%)
 Frame = -1

Query: 265 SDSEDNYDRTQEVDSELQKTTRV----PASVALSCVICWAEYSPTRGVLPCGHRFCYTCI 98
           +  ++ +D    ++SE++   R+    P S  LSCVICW E+S TRGVLPCGHRFCY+CI
Sbjct: 319 TSQDEGFDIEDNINSEIKDGDRIRQMIPTSANLSCVICWTEFSSTRGVLPCGHRFCYSCI 378

Query: 97  QNWADHMASRRMASTCPLCKAIFSSITKVDSA 2
           Q+WADHMASRR  +TCPLCKA F SITKVD A
Sbjct: 379 QSWADHMASRRKTATCPLCKASFVSITKVDDA 410


>emb|CBI16878.3| unnamed protein product [Vitis vinifera]
          Length = 475

 Score =  124 bits (310), Expect = 1e-26
 Identities = 55/92 (59%), Positives = 68/92 (73%), Gaps = 4/92 (4%)
 Frame = -1

Query: 265 SDSEDNYDRTQEVDSELQKTTRV----PASVALSCVICWAEYSPTRGVLPCGHRFCYTCI 98
           +  ++ +D    ++SE++   R+    P S  LSCVICW E+S TRGVLPCGHRFCY+CI
Sbjct: 291 TSQDEGFDIEDNINSEIKDGDRIRQMIPTSANLSCVICWTEFSSTRGVLPCGHRFCYSCI 350

Query: 97  QNWADHMASRRMASTCPLCKAIFSSITKVDSA 2
           Q+WADHMASRR  +TCPLCKA F SITKVD A
Sbjct: 351 QSWADHMASRRKTATCPLCKASFVSITKVDDA 382


>gb|ABK94444.1| unknown [Populus trichocarpa]
          Length = 482

 Score =  120 bits (302), Expect = 9e-26
 Identities = 55/88 (62%), Positives = 67/88 (76%)
 Frame = -1

Query: 265 SDSEDNYDRTQEVDSELQKTTRVPASVALSCVICWAEYSPTRGVLPCGHRFCYTCIQNWA 86
           S +E+   + +++D + +   R+PA   LSCVICW E+S TRGVLPCGHRFCY+CIQ WA
Sbjct: 303 SAAENLNAKVKDMD-QFESVARLPAPAELSCVICWTEFSSTRGVLPCGHRFCYSCIQEWA 361

Query: 85  DHMASRRMASTCPLCKAIFSSITKVDSA 2
           DHMASRR  STCPLCKA FS ITKV+ A
Sbjct: 362 DHMASRRRISTCPLCKAGFSIITKVEDA 389


>ref|XP_002305970.1| predicted protein [Populus trichocarpa] gi|222848934|gb|EEE86481.1|
           predicted protein [Populus trichocarpa]
          Length = 422

 Score =  120 bits (300), Expect = 1e-25
 Identities = 52/73 (71%), Positives = 58/73 (79%)
 Frame = -1

Query: 220 ELQKTTRVPASVALSCVICWAEYSPTRGVLPCGHRFCYTCIQNWADHMASRRMASTCPLC 41
           + +   R+PA   LSCVICW E+S TRGVLPCGHRFCY+CIQ WADHMASRR  STCPLC
Sbjct: 257 QFESVARLPAPAELSCVICWTEFSSTRGVLPCGHRFCYSCIQEWADHMASRRRISTCPLC 316

Query: 40  KAIFSSITKVDSA 2
           KA FS ITKV+ A
Sbjct: 317 KAGFSIITKVEDA 329


>ref|XP_004145658.1| PREDICTED: uncharacterized protein LOC101213123 [Cucumis sativus]
          Length = 490

 Score =  116 bits (290), Expect = 2e-24
 Identities = 56/92 (60%), Positives = 65/92 (70%), Gaps = 1/92 (1%)
 Frame = -1

Query: 274 HGLSDSEDNY-DRTQEVDSELQKTTRVPASVALSCVICWAEYSPTRGVLPCGHRFCYTCI 98
           H ++D + N  D   E+D+ L  T     S  LSCVICW ++S TRGVLPCGHRFCY+CI
Sbjct: 333 HNMNDLQKNIEDPVIELDASLPST-----STELSCVICWTDFSSTRGVLPCGHRFCYSCI 387

Query: 97  QNWADHMASRRMASTCPLCKAIFSSITKVDSA 2
           QNWADHMA  R  STCPLCKA F SITKV+ A
Sbjct: 388 QNWADHMALSRKISTCPLCKASFLSITKVEYA 419


Top