BLASTX nr result
ID: Coptis24_contig00027492
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00027492 (304 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002279145.2| PREDICTED: uncharacterized protein LOC100256... 124 1e-26 emb|CBI16878.3| unnamed protein product [Vitis vinifera] 124 1e-26 gb|ABK94444.1| unknown [Populus trichocarpa] 120 9e-26 ref|XP_002305970.1| predicted protein [Populus trichocarpa] gi|2... 120 1e-25 ref|XP_004145658.1| PREDICTED: uncharacterized protein LOC101213... 116 2e-24 >ref|XP_002279145.2| PREDICTED: uncharacterized protein LOC100256612 [Vitis vinifera] Length = 503 Score = 124 bits (310), Expect = 1e-26 Identities = 55/92 (59%), Positives = 68/92 (73%), Gaps = 4/92 (4%) Frame = -1 Query: 265 SDSEDNYDRTQEVDSELQKTTRV----PASVALSCVICWAEYSPTRGVLPCGHRFCYTCI 98 + ++ +D ++SE++ R+ P S LSCVICW E+S TRGVLPCGHRFCY+CI Sbjct: 319 TSQDEGFDIEDNINSEIKDGDRIRQMIPTSANLSCVICWTEFSSTRGVLPCGHRFCYSCI 378 Query: 97 QNWADHMASRRMASTCPLCKAIFSSITKVDSA 2 Q+WADHMASRR +TCPLCKA F SITKVD A Sbjct: 379 QSWADHMASRRKTATCPLCKASFVSITKVDDA 410 >emb|CBI16878.3| unnamed protein product [Vitis vinifera] Length = 475 Score = 124 bits (310), Expect = 1e-26 Identities = 55/92 (59%), Positives = 68/92 (73%), Gaps = 4/92 (4%) Frame = -1 Query: 265 SDSEDNYDRTQEVDSELQKTTRV----PASVALSCVICWAEYSPTRGVLPCGHRFCYTCI 98 + ++ +D ++SE++ R+ P S LSCVICW E+S TRGVLPCGHRFCY+CI Sbjct: 291 TSQDEGFDIEDNINSEIKDGDRIRQMIPTSANLSCVICWTEFSSTRGVLPCGHRFCYSCI 350 Query: 97 QNWADHMASRRMASTCPLCKAIFSSITKVDSA 2 Q+WADHMASRR +TCPLCKA F SITKVD A Sbjct: 351 QSWADHMASRRKTATCPLCKASFVSITKVDDA 382 >gb|ABK94444.1| unknown [Populus trichocarpa] Length = 482 Score = 120 bits (302), Expect = 9e-26 Identities = 55/88 (62%), Positives = 67/88 (76%) Frame = -1 Query: 265 SDSEDNYDRTQEVDSELQKTTRVPASVALSCVICWAEYSPTRGVLPCGHRFCYTCIQNWA 86 S +E+ + +++D + + R+PA LSCVICW E+S TRGVLPCGHRFCY+CIQ WA Sbjct: 303 SAAENLNAKVKDMD-QFESVARLPAPAELSCVICWTEFSSTRGVLPCGHRFCYSCIQEWA 361 Query: 85 DHMASRRMASTCPLCKAIFSSITKVDSA 2 DHMASRR STCPLCKA FS ITKV+ A Sbjct: 362 DHMASRRRISTCPLCKAGFSIITKVEDA 389 >ref|XP_002305970.1| predicted protein [Populus trichocarpa] gi|222848934|gb|EEE86481.1| predicted protein [Populus trichocarpa] Length = 422 Score = 120 bits (300), Expect = 1e-25 Identities = 52/73 (71%), Positives = 58/73 (79%) Frame = -1 Query: 220 ELQKTTRVPASVALSCVICWAEYSPTRGVLPCGHRFCYTCIQNWADHMASRRMASTCPLC 41 + + R+PA LSCVICW E+S TRGVLPCGHRFCY+CIQ WADHMASRR STCPLC Sbjct: 257 QFESVARLPAPAELSCVICWTEFSSTRGVLPCGHRFCYSCIQEWADHMASRRRISTCPLC 316 Query: 40 KAIFSSITKVDSA 2 KA FS ITKV+ A Sbjct: 317 KAGFSIITKVEDA 329 >ref|XP_004145658.1| PREDICTED: uncharacterized protein LOC101213123 [Cucumis sativus] Length = 490 Score = 116 bits (290), Expect = 2e-24 Identities = 56/92 (60%), Positives = 65/92 (70%), Gaps = 1/92 (1%) Frame = -1 Query: 274 HGLSDSEDNY-DRTQEVDSELQKTTRVPASVALSCVICWAEYSPTRGVLPCGHRFCYTCI 98 H ++D + N D E+D+ L T S LSCVICW ++S TRGVLPCGHRFCY+CI Sbjct: 333 HNMNDLQKNIEDPVIELDASLPST-----STELSCVICWTDFSSTRGVLPCGHRFCYSCI 387 Query: 97 QNWADHMASRRMASTCPLCKAIFSSITKVDSA 2 QNWADHMA R STCPLCKA F SITKV+ A Sbjct: 388 QNWADHMALSRKISTCPLCKASFLSITKVEYA 419