BLASTX nr result

ID: Coptis24_contig00027482 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027482
         (251 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548216.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...   123   1e-26
gb|ABK96309.1| unknown [Populus trichocarpa x Populus deltoides]      120   9e-26
ref|XP_003548214.1| PREDICTED: LOW QUALITY PROTEIN: 1-aminocyclo...   119   3e-25
ref|XP_002315711.1| predicted protein [Populus trichocarpa] gi|2...   116   2e-24
emb|CBI23591.3| unnamed protein product [Vitis vinifera]              115   5e-24

>ref|XP_003548216.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like
           [Glycine max]
          Length = 369

 Score =  123 bits (309), Expect = 1e-26
 Identities = 60/79 (75%), Positives = 69/79 (87%), Gaps = 1/79 (1%)
 Frame = +3

Query: 18  ILQLISNDKFVSVEHRVLANHIGPRVSAACFFT-NLGRSTKTYGPIKELLSQENPAIYRE 194
           +LQLISNDKF SVEHRVLAN IGPRVS ACFFT +L  +T+ YGPIKELLS+E P +YRE
Sbjct: 282 LLQLISNDKFKSVEHRVLANRIGPRVSVACFFTLHLYPTTRIYGPIKELLSEEKPPVYRE 341

Query: 195 TTLKEFVAYYDTKGLDGNS 251
           T+LK+F+AYYD KGLDGNS
Sbjct: 342 TSLKDFIAYYDNKGLDGNS 360


>gb|ABK96309.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 370

 Score =  120 bits (302), Expect = 9e-26
 Identities = 60/79 (75%), Positives = 69/79 (87%), Gaps = 1/79 (1%)
 Frame = +3

Query: 18  ILQLISNDKFVSVEHRVLANHIGPRVSAACFFT-NLGRSTKTYGPIKELLSQENPAIYRE 194
           +LQLISNDKF SVEHRV+ANHIGPRVS A FFT +L  ST+ YGPIKELLS+ENP IY E
Sbjct: 285 LLQLISNDKFKSVEHRVVANHIGPRVSVASFFTPHLYPSTRLYGPIKELLSEENPPIYCE 344

Query: 195 TTLKEFVAYYDTKGLDGNS 251
            T+K+F+AYYD+KGLDGNS
Sbjct: 345 ITVKDFIAYYDSKGLDGNS 363


>ref|XP_003548214.1| PREDICTED: LOW QUALITY PROTEIN: 1-aminocyclopropane-1-carboxylate
           oxidase homolog 1-like [Glycine max]
          Length = 374

 Score =  119 bits (298), Expect = 3e-25
 Identities = 59/79 (74%), Positives = 67/79 (84%), Gaps = 1/79 (1%)
 Frame = +3

Query: 18  ILQLISNDKFVSVEHRVLANHIGPRVSAACFFT-NLGRSTKTYGPIKELLSQENPAIYRE 194
           +LQLISNDKF SVEHRVLAN IGPRVS ACFFT +   ST+ YGPIKELLS+E P +YRE
Sbjct: 287 LLQLISNDKFKSVEHRVLANRIGPRVSVACFFTIHFYPSTRIYGPIKELLSEEXPPVYRE 346

Query: 195 TTLKEFVAYYDTKGLDGNS 251
           T+LK+F+AYY  KGLDGNS
Sbjct: 347 TSLKDFIAYYYNKGLDGNS 365


>ref|XP_002315711.1| predicted protein [Populus trichocarpa] gi|222864751|gb|EEF01882.1|
           predicted protein [Populus trichocarpa]
          Length = 374

 Score =  116 bits (291), Expect = 2e-24
 Identities = 58/76 (76%), Positives = 66/76 (86%), Gaps = 1/76 (1%)
 Frame = +3

Query: 27  LISNDKFVSVEHRVLANHIGPRVSAACFFT-NLGRSTKTYGPIKELLSQENPAIYRETTL 203
           LISNDKF SVEHRV+ANHIGPRVS A FFT +L  ST+ YGPIKELLS+ENP IY E T+
Sbjct: 292 LISNDKFKSVEHRVVANHIGPRVSVASFFTPHLYPSTRLYGPIKELLSEENPPIYCEITV 351

Query: 204 KEFVAYYDTKGLDGNS 251
           K+F+AYYD+KGLDGNS
Sbjct: 352 KDFIAYYDSKGLDGNS 367


>emb|CBI23591.3| unnamed protein product [Vitis vinifera]
          Length = 206

 Score =  115 bits (287), Expect = 5e-24
 Identities = 55/79 (69%), Positives = 69/79 (87%), Gaps = 1/79 (1%)
 Frame = +3

Query: 18  ILQLISNDKFVSVEHRVLANHIGPRVSAACFF-TNLGRSTKTYGPIKELLSQENPAIYRE 194
           +LQLI+ND+F SVEHRVLANHIGPRVS ACFF T++  S+K YGPIKELLS+ENP  Y+E
Sbjct: 121 LLQLITNDRFKSVEHRVLANHIGPRVSVACFFSTSIQPSSKLYGPIKELLSEENPPKYKE 180

Query: 195 TTLKEFVAYYDTKGLDGNS 251
           TT+ ++VAY+++KGLDG S
Sbjct: 181 TTVGDYVAYFNSKGLDGTS 199


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