BLASTX nr result
ID: Coptis24_contig00027482
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00027482 (251 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003548216.1| PREDICTED: 1-aminocyclopropane-1-carboxylate... 123 1e-26 gb|ABK96309.1| unknown [Populus trichocarpa x Populus deltoides] 120 9e-26 ref|XP_003548214.1| PREDICTED: LOW QUALITY PROTEIN: 1-aminocyclo... 119 3e-25 ref|XP_002315711.1| predicted protein [Populus trichocarpa] gi|2... 116 2e-24 emb|CBI23591.3| unnamed protein product [Vitis vinifera] 115 5e-24 >ref|XP_003548216.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like [Glycine max] Length = 369 Score = 123 bits (309), Expect = 1e-26 Identities = 60/79 (75%), Positives = 69/79 (87%), Gaps = 1/79 (1%) Frame = +3 Query: 18 ILQLISNDKFVSVEHRVLANHIGPRVSAACFFT-NLGRSTKTYGPIKELLSQENPAIYRE 194 +LQLISNDKF SVEHRVLAN IGPRVS ACFFT +L +T+ YGPIKELLS+E P +YRE Sbjct: 282 LLQLISNDKFKSVEHRVLANRIGPRVSVACFFTLHLYPTTRIYGPIKELLSEEKPPVYRE 341 Query: 195 TTLKEFVAYYDTKGLDGNS 251 T+LK+F+AYYD KGLDGNS Sbjct: 342 TSLKDFIAYYDNKGLDGNS 360 >gb|ABK96309.1| unknown [Populus trichocarpa x Populus deltoides] Length = 370 Score = 120 bits (302), Expect = 9e-26 Identities = 60/79 (75%), Positives = 69/79 (87%), Gaps = 1/79 (1%) Frame = +3 Query: 18 ILQLISNDKFVSVEHRVLANHIGPRVSAACFFT-NLGRSTKTYGPIKELLSQENPAIYRE 194 +LQLISNDKF SVEHRV+ANHIGPRVS A FFT +L ST+ YGPIKELLS+ENP IY E Sbjct: 285 LLQLISNDKFKSVEHRVVANHIGPRVSVASFFTPHLYPSTRLYGPIKELLSEENPPIYCE 344 Query: 195 TTLKEFVAYYDTKGLDGNS 251 T+K+F+AYYD+KGLDGNS Sbjct: 345 ITVKDFIAYYDSKGLDGNS 363 >ref|XP_003548214.1| PREDICTED: LOW QUALITY PROTEIN: 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like [Glycine max] Length = 374 Score = 119 bits (298), Expect = 3e-25 Identities = 59/79 (74%), Positives = 67/79 (84%), Gaps = 1/79 (1%) Frame = +3 Query: 18 ILQLISNDKFVSVEHRVLANHIGPRVSAACFFT-NLGRSTKTYGPIKELLSQENPAIYRE 194 +LQLISNDKF SVEHRVLAN IGPRVS ACFFT + ST+ YGPIKELLS+E P +YRE Sbjct: 287 LLQLISNDKFKSVEHRVLANRIGPRVSVACFFTIHFYPSTRIYGPIKELLSEEXPPVYRE 346 Query: 195 TTLKEFVAYYDTKGLDGNS 251 T+LK+F+AYY KGLDGNS Sbjct: 347 TSLKDFIAYYYNKGLDGNS 365 >ref|XP_002315711.1| predicted protein [Populus trichocarpa] gi|222864751|gb|EEF01882.1| predicted protein [Populus trichocarpa] Length = 374 Score = 116 bits (291), Expect = 2e-24 Identities = 58/76 (76%), Positives = 66/76 (86%), Gaps = 1/76 (1%) Frame = +3 Query: 27 LISNDKFVSVEHRVLANHIGPRVSAACFFT-NLGRSTKTYGPIKELLSQENPAIYRETTL 203 LISNDKF SVEHRV+ANHIGPRVS A FFT +L ST+ YGPIKELLS+ENP IY E T+ Sbjct: 292 LISNDKFKSVEHRVVANHIGPRVSVASFFTPHLYPSTRLYGPIKELLSEENPPIYCEITV 351 Query: 204 KEFVAYYDTKGLDGNS 251 K+F+AYYD+KGLDGNS Sbjct: 352 KDFIAYYDSKGLDGNS 367 >emb|CBI23591.3| unnamed protein product [Vitis vinifera] Length = 206 Score = 115 bits (287), Expect = 5e-24 Identities = 55/79 (69%), Positives = 69/79 (87%), Gaps = 1/79 (1%) Frame = +3 Query: 18 ILQLISNDKFVSVEHRVLANHIGPRVSAACFF-TNLGRSTKTYGPIKELLSQENPAIYRE 194 +LQLI+ND+F SVEHRVLANHIGPRVS ACFF T++ S+K YGPIKELLS+ENP Y+E Sbjct: 121 LLQLITNDRFKSVEHRVLANHIGPRVSVACFFSTSIQPSSKLYGPIKELLSEENPPKYKE 180 Query: 195 TTLKEFVAYYDTKGLDGNS 251 TT+ ++VAY+++KGLDG S Sbjct: 181 TTVGDYVAYFNSKGLDGTS 199