BLASTX nr result

ID: Coptis24_contig00027478 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027478
         (199 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263367.2| PREDICTED: uncharacterized protein LOC100248...   106   2e-21
emb|CBI38317.3| unnamed protein product [Vitis vinifera]              106   2e-21
ref|XP_004163165.1| PREDICTED: HAUS augmin-like complex subunit ...   105   3e-21
ref|XP_004150336.1| PREDICTED: HAUS augmin-like complex subunit ...   105   3e-21
ref|XP_003549936.1| PREDICTED: HAUS augmin-like complex subunit ...   100   9e-20

>ref|XP_002263367.2| PREDICTED: uncharacterized protein LOC100248257 [Vitis vinifera]
          Length = 415

 Score =  106 bits (265), Expect = 2e-21
 Identities = 55/69 (79%), Positives = 59/69 (85%), Gaps = 3/69 (4%)
 Frame = -1

Query: 199 LRSIFGTSERQWVEAQVENAKQQAMLAALKSQV---ETHTHLDLHSLRRKHSELAGELSH 29
           LRSIFGTSERQWVEAQVENAKQQA+L  LKSQV   E H HLDLHSLRRKHSEL GELS+
Sbjct: 185 LRSIFGTSERQWVEAQVENAKQQAILMTLKSQVTSDEAHIHLDLHSLRRKHSELVGELSN 244

Query: 28  LYRKVDKML 2
           LY K +K+L
Sbjct: 245 LYHKEEKLL 253


>emb|CBI38317.3| unnamed protein product [Vitis vinifera]
          Length = 463

 Score =  106 bits (265), Expect = 2e-21
 Identities = 55/69 (79%), Positives = 59/69 (85%), Gaps = 3/69 (4%)
 Frame = -1

Query: 199 LRSIFGTSERQWVEAQVENAKQQAMLAALKSQV---ETHTHLDLHSLRRKHSELAGELSH 29
           LRSIFGTSERQWVEAQVENAKQQA+L  LKSQV   E H HLDLHSLRRKHSEL GELS+
Sbjct: 142 LRSIFGTSERQWVEAQVENAKQQAILMTLKSQVTSDEAHIHLDLHSLRRKHSELVGELSN 201

Query: 28  LYRKVDKML 2
           LY K +K+L
Sbjct: 202 LYHKEEKLL 210


>ref|XP_004163165.1| PREDICTED: HAUS augmin-like complex subunit 3-like, partial
           [Cucumis sativus]
          Length = 380

 Score =  105 bits (263), Expect = 3e-21
 Identities = 55/69 (79%), Positives = 59/69 (85%), Gaps = 3/69 (4%)
 Frame = -1

Query: 199 LRSIFGTSERQWVEAQVENAKQQAMLAALKSQV---ETHTHLDLHSLRRKHSELAGELSH 29
           LRSIFGTSERQWVEAQVENAKQQA+L  LKSQV   E H HLDLHSLRRKHSEL GELS+
Sbjct: 272 LRSIFGTSERQWVEAQVENAKQQAILMVLKSQVTSDEAHIHLDLHSLRRKHSELVGELSN 331

Query: 28  LYRKVDKML 2
           LY K +K+L
Sbjct: 332 LYDKEEKLL 340


>ref|XP_004150336.1| PREDICTED: HAUS augmin-like complex subunit 3-like [Cucumis
           sativus]
          Length = 615

 Score =  105 bits (263), Expect = 3e-21
 Identities = 55/69 (79%), Positives = 59/69 (85%), Gaps = 3/69 (4%)
 Frame = -1

Query: 199 LRSIFGTSERQWVEAQVENAKQQAMLAALKSQV---ETHTHLDLHSLRRKHSELAGELSH 29
           LRSIFGTSERQWVEAQVENAKQQA+L  LKSQV   E H HLDLHSLRRKHSEL GELS+
Sbjct: 272 LRSIFGTSERQWVEAQVENAKQQAILMVLKSQVTSDEAHIHLDLHSLRRKHSELVGELSN 331

Query: 28  LYRKVDKML 2
           LY K +K+L
Sbjct: 332 LYDKEEKLL 340


>ref|XP_003549936.1| PREDICTED: HAUS augmin-like complex subunit 3-like [Glycine max]
          Length = 618

 Score =  100 bits (250), Expect = 9e-20
 Identities = 52/69 (75%), Positives = 57/69 (82%), Gaps = 3/69 (4%)
 Frame = -1

Query: 199 LRSIFGTSERQWVEAQVENAKQQAMLAALKSQV---ETHTHLDLHSLRRKHSELAGELSH 29
           LRSIFG SE+QWVEAQVENAKQQA+L  LKSQV   E H HLDLHSLRRKHSEL GELS+
Sbjct: 272 LRSIFGVSEKQWVEAQVENAKQQAILMTLKSQVSSDEAHIHLDLHSLRRKHSELKGELSN 331

Query: 28  LYRKVDKML 2
           LY   +K+L
Sbjct: 332 LYNHEEKLL 340