BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027473
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24922.3| unnamed protein product [Vitis vinifera]              155   3e-36
ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis v...   155   3e-36
dbj|BAE06274.1| topoisomerase II [Scutellaria baicalensis]            154   9e-36
ref|XP_002298421.1| predicted protein [Populus trichocarpa] gi|2...   154   9e-36
gb|AAN85207.1| DNA topoisomerase II [Nicotiana tabacum] gi|26984...   153   1e-35

>emb|CBI24922.3| unnamed protein product [Vitis vinifera]
          Length = 1452

 Score =  155 bits (392), Expect = 3e-36
 Identities = 78/109 (71%), Positives = 85/109 (77%), Gaps = 1/109 (0%)
 Frame = +2

Query: 38  MAIDKTLPLQPXXXXXXXXXXXX-TIEETYQKKTQLEHILLRPDTYIGSVEKHPQTLWVY 214
           MA+D  LPLQ              TIEETYQKK+QLEHILLRPDTYIGS+EKH Q LWV+
Sbjct: 1   MAVDNKLPLQSSNNANMPAKPAGKTIEETYQKKSQLEHILLRPDTYIGSIEKHTQALWVF 60

Query: 215 ENETMVQKPISYVPGLYKIFDEILVNAADNKQRDPKMDSVKVVIDAEEN 361
           EN  MV + +SYVPGLYKIFDEILVNAADNKQRDP MDSVKVVID E+N
Sbjct: 61  ENNEMVHRSVSYVPGLYKIFDEILVNAADNKQRDPSMDSVKVVIDVEKN 109


>ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis vinifera]
          Length = 1489

 Score =  155 bits (392), Expect = 3e-36
 Identities = 78/109 (71%), Positives = 85/109 (77%), Gaps = 1/109 (0%)
 Frame = +2

Query: 38  MAIDKTLPLQPXXXXXXXXXXXX-TIEETYQKKTQLEHILLRPDTYIGSVEKHPQTLWVY 214
           MA+D  LPLQ              TIEETYQKK+QLEHILLRPDTYIGS+EKH Q LWV+
Sbjct: 1   MAVDNKLPLQSSNNANMPAKPAGKTIEETYQKKSQLEHILLRPDTYIGSIEKHTQALWVF 60

Query: 215 ENETMVQKPISYVPGLYKIFDEILVNAADNKQRDPKMDSVKVVIDAEEN 361
           EN  MV + +SYVPGLYKIFDEILVNAADNKQRDP MDSVKVVID E+N
Sbjct: 61  ENNEMVHRSVSYVPGLYKIFDEILVNAADNKQRDPSMDSVKVVIDVEKN 109


>dbj|BAE06274.1| topoisomerase II [Scutellaria baicalensis]
          Length = 1469

 Score =  154 bits (388), Expect = 9e-36
 Identities = 73/85 (85%), Positives = 78/85 (91%)
 Frame = +2

Query: 107 TIEETYQKKTQLEHILLRPDTYIGSVEKHPQTLWVYENETMVQKPISYVPGLYKIFDEIL 286
           TIE+ YQKKTQLEHILLRPDTYIGS+E+H QTLWVYENE MVQK I+YVPGLYKIFDEIL
Sbjct: 30  TIEQAYQKKTQLEHILLRPDTYIGSIERHTQTLWVYENEQMVQKSITYVPGLYKIFDEIL 89

Query: 287 VNAADNKQRDPKMDSVKVVIDAEEN 361
           VNAADNKQRDPKM+SVKV ID E N
Sbjct: 90  VNAADNKQRDPKMNSVKVTIDVESN 114


>ref|XP_002298421.1| predicted protein [Populus trichocarpa] gi|222845679|gb|EEE83226.1|
           predicted protein [Populus trichocarpa]
          Length = 1468

 Score =  154 bits (388), Expect = 9e-36
 Identities = 71/86 (82%), Positives = 80/86 (93%)
 Frame = +2

Query: 107 TIEETYQKKTQLEHILLRPDTYIGSVEKHPQTLWVYENETMVQKPISYVPGLYKIFDEIL 286
           TIEETYQKK+QLEHILLRPDTYIGS+EKH QTLWVYE + +V +P++YVPGLYKIFDEIL
Sbjct: 6   TIEETYQKKSQLEHILLRPDTYIGSIEKHAQTLWVYEGDKIVHRPVTYVPGLYKIFDEIL 65

Query: 287 VNAADNKQRDPKMDSVKVVIDAEENV 364
           VNAADNKQRDPKMDS+KVVID E N+
Sbjct: 66  VNAADNKQRDPKMDSLKVVIDGENNL 91


>gb|AAN85207.1| DNA topoisomerase II [Nicotiana tabacum] gi|26984168|gb|AAN85208.1|
           DNA topoisomerase II [Nicotiana tabacum]
          Length = 1482

 Score =  153 bits (387), Expect = 1e-35
 Identities = 71/85 (83%), Positives = 80/85 (94%)
 Frame = +2

Query: 107 TIEETYQKKTQLEHILLRPDTYIGSVEKHPQTLWVYENETMVQKPISYVPGLYKIFDEIL 286
           TIE+TYQKKTQLEHILLRPDTYIGSVEKH QTLWV+EN+ M  +P++YVPGLYKIFDEIL
Sbjct: 22  TIEQTYQKKTQLEHILLRPDTYIGSVEKHTQTLWVWENDKMTHRPVTYVPGLYKIFDEIL 81

Query: 287 VNAADNKQRDPKMDSVKVVIDAEEN 361
           VNAADNKQRDPKMD+V+VVID E+N
Sbjct: 82  VNAADNKQRDPKMDAVEVVIDPEQN 106