BLASTX nr result
ID: Coptis24_contig00027472
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00027472 (378 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI38018.3| unnamed protein product [Vitis vinifera] 154 6e-36 ref|XP_002274534.1| PREDICTED: DNA replication licensing factor ... 154 6e-36 ref|XP_002512966.1| DNA replication licensing factor MCM4, putat... 154 7e-36 gb|EEE54765.1| hypothetical protein OsJ_02146 [Oryza sativa Japo... 147 1e-33 gb|EEC70839.1| hypothetical protein OsI_02336 [Oryza sativa Indi... 147 1e-33 >emb|CBI38018.3| unnamed protein product [Vitis vinifera] Length = 834 Score = 154 bits (390), Expect = 6e-36 Identities = 83/106 (78%), Positives = 91/106 (85%), Gaps = 1/106 (0%) Frame = -2 Query: 377 AFRLLEVALQQSATDHATGTIDMDLITTGVSASERMRRENLLSAARNIIMEKMQLGGPST 198 AFRLLEVALQQSATDH+TGTIDMDLITTGVSASERMRRE+L+S RNIIMEKMQLGGPS Sbjct: 729 AFRLLEVALQQSATDHSTGTIDMDLITTGVSASERMRRESLVSTTRNIIMEKMQLGGPSM 788 Query: 197 RTXXXXXXLKKQSS-AEVHLTDLRNALSTLASEGFIVVQGDTIKRI 63 R LKKQSS +E HL DLRNAL+TLASEGF+ V GD++KRI Sbjct: 789 RLLELLEELKKQSSCSEAHLNDLRNALATLASEGFVSVHGDSVKRI 834 >ref|XP_002274534.1| PREDICTED: DNA replication licensing factor MCM4 [Vitis vinifera] Length = 840 Score = 154 bits (390), Expect = 6e-36 Identities = 83/106 (78%), Positives = 91/106 (85%), Gaps = 1/106 (0%) Frame = -2 Query: 377 AFRLLEVALQQSATDHATGTIDMDLITTGVSASERMRRENLLSAARNIIMEKMQLGGPST 198 AFRLLEVALQQSATDH+TGTIDMDLITTGVSASERMRRE+L+S RNIIMEKMQLGGPS Sbjct: 735 AFRLLEVALQQSATDHSTGTIDMDLITTGVSASERMRRESLVSTTRNIIMEKMQLGGPSM 794 Query: 197 RTXXXXXXLKKQSS-AEVHLTDLRNALSTLASEGFIVVQGDTIKRI 63 R LKKQSS +E HL DLRNAL+TLASEGF+ V GD++KRI Sbjct: 795 RLLELLEELKKQSSCSEAHLNDLRNALATLASEGFVSVHGDSVKRI 840 >ref|XP_002512966.1| DNA replication licensing factor MCM4, putative [Ricinus communis] gi|223547977|gb|EEF49469.1| DNA replication licensing factor MCM4, putative [Ricinus communis] Length = 867 Score = 154 bits (389), Expect = 7e-36 Identities = 82/106 (77%), Positives = 92/106 (86%), Gaps = 1/106 (0%) Frame = -2 Query: 377 AFRLLEVALQQSATDHATGTIDMDLITTGVSASERMRRENLLSAARNIIMEKMQLGGPST 198 AFRLLEVA+QQSATDH+TGTIDMDLITTGVSASERMRRENL+SA RNIIMEK+QLGGPS Sbjct: 762 AFRLLEVAMQQSATDHSTGTIDMDLITTGVSASERMRRENLVSATRNIIMEKLQLGGPSM 821 Query: 197 RTXXXXXXLKKQ-SSAEVHLTDLRNALSTLASEGFIVVQGDTIKRI 63 R LKKQ +S EVHL DLRNA++ LASEGF+VV GD++KRI Sbjct: 822 RLLEIMEELKKQNTSNEVHLQDLRNAVANLASEGFVVVHGDSVKRI 867 >gb|EEE54765.1| hypothetical protein OsJ_02146 [Oryza sativa Japonica Group] Length = 862 Score = 147 bits (370), Expect = 1e-33 Identities = 72/105 (68%), Positives = 87/105 (82%) Frame = -2 Query: 377 AFRLLEVALQQSATDHATGTIDMDLITTGVSASERMRRENLLSAARNIIMEKMQLGGPST 198 AFRLLEVA+QQSATDHATGTIDMDLI TG+SASER RR+NL++A RN++MEKMQLGGPS Sbjct: 758 AFRLLEVAMQQSATDHATGTIDMDLIMTGISASERQRRDNLVAATRNLVMEKMQLGGPSV 817 Query: 197 RTXXXXXXLKKQSSAEVHLTDLRNALSTLASEGFIVVQGDTIKRI 63 R ++KQSS EVHL DLR AL TL +EG +V+ GD++KR+ Sbjct: 818 RMIELLEEIRKQSSMEVHLHDLRGALGTLMTEGAVVIHGDSVKRV 862 >gb|EEC70839.1| hypothetical protein OsI_02336 [Oryza sativa Indica Group] Length = 195 Score = 147 bits (370), Expect = 1e-33 Identities = 72/105 (68%), Positives = 87/105 (82%) Frame = -2 Query: 377 AFRLLEVALQQSATDHATGTIDMDLITTGVSASERMRRENLLSAARNIIMEKMQLGGPST 198 AFRLLEVA+QQSATDHATGTIDMDLI TG+SASER RR+NL++A RN++MEKMQLGGPS Sbjct: 91 AFRLLEVAMQQSATDHATGTIDMDLIMTGISASERQRRDNLVAATRNLVMEKMQLGGPSV 150 Query: 197 RTXXXXXXLKKQSSAEVHLTDLRNALSTLASEGFIVVQGDTIKRI 63 R ++KQSS EVHL DLR AL TL +EG +V+ GD++KR+ Sbjct: 151 RMIELLEEIRKQSSMEVHLHDLRGALGTLMTEGAVVIHGDSVKRV 195