BLASTX nr result

ID: Coptis24_contig00027463 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027463
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA31701.1| PKn3 [Ipomoea nil]                                     67   1e-09
gb|AFK44130.1| unknown [Lotus japonicus]                               64   1e-08
gb|AFK35053.1| unknown [Lotus japonicus]                               64   1e-08
gb|AEA11233.1| knotted-like homebox protein [Elaeis guineensis]        64   1e-08
ref|XP_003569063.1| PREDICTED: homeobox protein knotted-1-like 1...    64   2e-08

>dbj|BAA31701.1| PKn3 [Ipomoea nil]
          Length = 358

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 30/43 (69%), Positives = 34/43 (79%), Gaps = 1/43 (2%)
 Frame = +2

Query: 2   NWFINQRKRHWRPSEDMRFAVMEGISGG-EGHVFYDIPGAIKN 127
           NWFINQRKRHWRPSEDMRFA+MEG+SG   G +F+D  G   N
Sbjct: 313 NWFINQRKRHWRPSEDMRFALMEGVSGDVAGSMFFDAGGGTGN 355


>gb|AFK44130.1| unknown [Lotus japonicus]
          Length = 299

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 25/28 (89%), Positives = 28/28 (100%)
 Frame = +2

Query: 2   NWFINQRKRHWRPSEDMRFAVMEGISGG 85
           NWFINQRKRHW+PSEDMRFA+MEG+SGG
Sbjct: 267 NWFINQRKRHWKPSEDMRFAIMEGVSGG 294


>gb|AFK35053.1| unknown [Lotus japonicus]
          Length = 183

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 25/28 (89%), Positives = 28/28 (100%)
 Frame = +2

Query: 2   NWFINQRKRHWRPSEDMRFAVMEGISGG 85
           NWFINQRKRHW+PSEDMRFA+MEG+SGG
Sbjct: 151 NWFINQRKRHWKPSEDMRFAIMEGVSGG 178


>gb|AEA11233.1| knotted-like homebox protein [Elaeis guineensis]
          Length = 318

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 28/41 (68%), Positives = 33/41 (80%), Gaps = 1/41 (2%)
 Frame = +2

Query: 2   NWFINQRKRHWRPSEDMRFAVMEGISGG-EGHVFYDIPGAI 121
           NWFINQRKRHW+PSEDMRFA+MEG+SGG  G + Y   G +
Sbjct: 276 NWFINQRKRHWKPSEDMRFALMEGVSGGSSGTMLYFDTGTV 316


>ref|XP_003569063.1| PREDICTED: homeobox protein knotted-1-like 1-like [Brachypodium
           distachyon]
          Length = 300

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 25/30 (83%), Positives = 29/30 (96%)
 Frame = +2

Query: 2   NWFINQRKRHWRPSEDMRFAVMEGISGGEG 91
           NWFINQRKRHW+PSEDMRFA+MEG++GG G
Sbjct: 255 NWFINQRKRHWKPSEDMRFALMEGVNGGGG 284


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