BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027462
         (1181 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containi...   337   3e-90
ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containi...   337   3e-90
emb|CBI32403.3| unnamed protein product [Vitis vinifera]              337   3e-90
emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]   337   3e-90
ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containi...   324   3e-86

>ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990-like
            [Vitis vinifera]
          Length = 848

 Score =  337 bits (865), Expect = 3e-90
 Identities = 157/194 (80%), Positives = 173/194 (89%)
 Frame = +1

Query: 1    CRIHGNVELGALASEHLFEVDVENVGYYVLLSNIYANVGRWEGVDKVRSLVNNRGLKKTP 180
            CRIHGN+ELG  AS+ LFEVD ENVGYYVLLSNIYANVG+WEGVDKVRSL   RGLKKTP
Sbjct: 655  CRIHGNIELGKFASDRLFEVDSENVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTP 714

Query: 181  GWSSIEVNNRFGVFYTGNRSHPLSEEIYKELKVLMTKIKNIGYVPDYSFVLQDVEEDEKE 360
            GWSSIEVN R  +FYTGN+SHP  +EIY EL++L  K+K++GY+PDYSFVLQDVEEDEKE
Sbjct: 715  GWSSIEVNRRVDIFYTGNQSHPKCKEIYAELRILTAKMKSLGYIPDYSFVLQDVEEDEKE 774

Query: 361  QILTSHSERLAIAFGIISTPPKTPIHIFKNLRVCGDCHNATKYISKITEREIVVRDSNRF 540
             ILTSHSERLAIAFGIISTPPK+ I IFKNLRVCGDCHNATK+IS+ITEREIVVRDS RF
Sbjct: 775  HILTSHSERLAIAFGIISTPPKSAIRIFKNLRVCGDCHNATKFISRITEREIVVRDSKRF 834

Query: 541  HHFSNGDCSCGDHW 582
            HHF NG CSCGD+W
Sbjct: 835  HHFKNGICSCGDYW 848


>ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990-like
            [Vitis vinifera]
          Length = 891

 Score =  337 bits (865), Expect = 3e-90
 Identities = 156/194 (80%), Positives = 176/194 (90%)
 Frame = +1

Query: 1    CRIHGNVELGALASEHLFEVDVENVGYYVLLSNIYANVGRWEGVDKVRSLVNNRGLKKTP 180
            CRIHGN+ELG  AS+ LFEVD +NVGYYVLLSNIYANVG+WEGVDKVRSL   RGLKKTP
Sbjct: 698  CRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTP 757

Query: 181  GWSSIEVNNRFGVFYTGNRSHPLSEEIYKELKVLMTKIKNIGYVPDYSFVLQDVEEDEKE 360
            GWS+IEVN +  VFYTGN+SHP  +EIY+EL+VL  K+K++GY+PDYSFVLQDVEEDEKE
Sbjct: 758  GWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKE 817

Query: 361  QILTSHSERLAIAFGIISTPPKTPIHIFKNLRVCGDCHNATKYISKITEREIVVRDSNRF 540
             ILTSHSERLAIAFGIISTPPK+PI IFKNLRVCGDCHNATK+IS+IT+REIVVRDSNRF
Sbjct: 818  HILTSHSERLAIAFGIISTPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDSNRF 877

Query: 541  HHFSNGDCSCGDHW 582
            HHF +G CSCGD+W
Sbjct: 878  HHFKDGICSCGDYW 891


>emb|CBI32403.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score =  337 bits (865), Expect = 3e-90
 Identities = 156/194 (80%), Positives = 176/194 (90%)
 Frame = +1

Query: 1    CRIHGNVELGALASEHLFEVDVENVGYYVLLSNIYANVGRWEGVDKVRSLVNNRGLKKTP 180
            CRIHGN+ELG  AS+ LFEVD +NVGYYVLLSNIYANVG+WEGVDKVRSL   RGLKKTP
Sbjct: 465  CRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTP 524

Query: 181  GWSSIEVNNRFGVFYTGNRSHPLSEEIYKELKVLMTKIKNIGYVPDYSFVLQDVEEDEKE 360
            GWS+IEVN +  VFYTGN+SHP  +EIY+EL+VL  K+K++GY+PDYSFVLQDVEEDEKE
Sbjct: 525  GWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKE 584

Query: 361  QILTSHSERLAIAFGIISTPPKTPIHIFKNLRVCGDCHNATKYISKITEREIVVRDSNRF 540
             ILTSHSERLAIAFGIISTPPK+PI IFKNLRVCGDCHNATK+IS+IT+REIVVRDSNRF
Sbjct: 585  HILTSHSERLAIAFGIISTPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDSNRF 644

Query: 541  HHFSNGDCSCGDHW 582
            HHF +G CSCGD+W
Sbjct: 645  HHFKDGICSCGDYW 658


>emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
          Length = 891

 Score =  337 bits (865), Expect = 3e-90
 Identities = 156/194 (80%), Positives = 176/194 (90%)
 Frame = +1

Query: 1    CRIHGNVELGALASEHLFEVDVENVGYYVLLSNIYANVGRWEGVDKVRSLVNNRGLKKTP 180
            CRIHGN+ELG  AS+ LFEVD +NVGYYVLLSNIYANVG+WEGVDKVRSL   RGLKKTP
Sbjct: 698  CRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTP 757

Query: 181  GWSSIEVNNRFGVFYTGNRSHPLSEEIYKELKVLMTKIKNIGYVPDYSFVLQDVEEDEKE 360
            GWS+IEVN +  VFYTGN+SHP  +EIY+EL+VL  K+K++GY+PDYSFVLQDVEEDEKE
Sbjct: 758  GWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKE 817

Query: 361  QILTSHSERLAIAFGIISTPPKTPIHIFKNLRVCGDCHNATKYISKITEREIVVRDSNRF 540
             ILTSHSERLAIAFGIISTPPK+PI IFKNLRVCGDCHNATK+IS+IT+REIVVRDSNRF
Sbjct: 818  HILTSHSERLAIAFGIISTPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDSNRF 877

Query: 541  HHFSNGDCSCGDHW 582
            HHF +G CSCGD+W
Sbjct: 878  HHFKDGICSCGDYW 891


>ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990-like
            [Glycine max]
          Length = 824

 Score =  324 bits (830), Expect = 3e-86
 Identities = 152/194 (78%), Positives = 169/194 (87%)
 Frame = +1

Query: 1    CRIHGNVELGALASEHLFEVDVENVGYYVLLSNIYANVGRWEGVDKVRSLVNNRGLKKTP 180
            CRIHGN ELG  AS+ L EVD ENVGYYVLLSNIYANVG+WEG  KVRSL  +RGL+KTP
Sbjct: 631  CRIHGNAELGTFASDRLLEVDSENVGYYVLLSNIYANVGKWEGAVKVRSLARDRGLRKTP 690

Query: 181  GWSSIEVNNRFGVFYTGNRSHPLSEEIYKELKVLMTKIKNIGYVPDYSFVLQDVEEDEKE 360
            GWSS+ V +   VFY GN+SHP   EIY+EL+VL  K+K++GYVPDYSFVLQDVEEDEKE
Sbjct: 691  GWSSVVVGSVVEVFYAGNQSHPQCAEIYEELRVLNAKMKSLGYVPDYSFVLQDVEEDEKE 750

Query: 361  QILTSHSERLAIAFGIISTPPKTPIHIFKNLRVCGDCHNATKYISKITEREIVVRDSNRF 540
            +ILTSHSERLAI FGIISTPPK+PI IFKNLRVCGDCHNATKYISKITEREI+VRDSNRF
Sbjct: 751  EILTSHSERLAIVFGIISTPPKSPIRIFKNLRVCGDCHNATKYISKITEREIIVRDSNRF 810

Query: 541  HHFSNGDCSCGDHW 582
            HHF +G CSCGD+W
Sbjct: 811  HHFKDGICSCGDYW 824