BLASTX nr result
ID: Coptis24_contig00027460
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00027460 (298 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002314718.1| predicted protein [Populus trichocarpa] gi|2... 138 4e-31 ref|XP_002281134.1| PREDICTED: mitochondrial substrate carrier f... 138 5e-31 gb|AFK47577.1| unknown [Lotus japonicus] 135 3e-30 ref|XP_002512372.1| peroxisomal membrane protein pmp34, putative... 134 1e-29 ref|XP_002517198.1| peroxisomal membrane protein pmp34, putative... 133 2e-29 >ref|XP_002314718.1| predicted protein [Populus trichocarpa] gi|222863758|gb|EEF00889.1| predicted protein [Populus trichocarpa] Length = 322 Score = 138 bits (348), Expect = 4e-31 Identities = 73/99 (73%), Positives = 81/99 (81%) Frame = +2 Query: 2 DGLGISLLLTSNPAIQYTVFDQLKSRLLMRQRSSKADTESSPEALSAFSAFVLGAVSKSI 181 DGLGISLLLTSNP+IQYTVFDQLK RLL RQ S K+ ESSPEALSAFSAFVLGAVSK I Sbjct: 159 DGLGISLLLTSNPSIQYTVFDQLKRRLLERQLSKKSSIESSPEALSAFSAFVLGAVSKCI 218 Query: 182 ATCLTYPAIRCKVMIQAADVSEDGKDAQPKQSKTISGTL 298 ATC+TYPAIRCKV +QAA+ E + ++KTISG L Sbjct: 219 ATCVTYPAIRCKVTLQAAESDESEIEEVQAKTKTISGAL 257 >ref|XP_002281134.1| PREDICTED: mitochondrial substrate carrier family protein Q [Vitis vinifera] gi|297737006|emb|CBI26207.3| unnamed protein product [Vitis vinifera] Length = 319 Score = 138 bits (347), Expect = 5e-31 Identities = 75/101 (74%), Positives = 86/101 (85%), Gaps = 2/101 (1%) Frame = +2 Query: 2 DGLGISLLLTSNPAIQYTVFDQLKSRLLMRQRSSKADTESSPEALSAFSAFVLGAVSKSI 181 DGLGISLLLT+NP+IQYTVFDQLK RLL + S+K TESSPEALSAFSAFVLGAVSK I Sbjct: 159 DGLGISLLLTANPSIQYTVFDQLKLRLLKGKLSNKTGTESSPEALSAFSAFVLGAVSKCI 218 Query: 182 ATCLTYPAIRCKVMIQAADVSEDG--KDAQPKQSKTISGTL 298 AT +TYPAIRCKVM+QAA+ EDG K+AQP+ KT+S T+ Sbjct: 219 ATTVTYPAIRCKVMLQAAESDEDGTTKEAQPR--KTVSDTI 257 >gb|AFK47577.1| unknown [Lotus japonicus] Length = 320 Score = 135 bits (341), Expect = 3e-30 Identities = 70/100 (70%), Positives = 82/100 (82%), Gaps = 1/100 (1%) Frame = +2 Query: 2 DGLGISLLLTSNPAIQYTVFDQLKSRLLMRQRSSKADTESSPEALSAFSAFVLGAVSKSI 181 DGL IS+LLTSNP+IQYT FDQLK R+L + S K DT+SSPEALS+FSAF+LGAVSK Sbjct: 159 DGLAISILLTSNPSIQYTAFDQLKQRILKDKMSKKTDTKSSPEALSSFSAFMLGAVSKCA 218 Query: 182 ATCLTYPAIRCKVMIQAADVSEDGK-DAQPKQSKTISGTL 298 ATCLTYPAIRCKVMIQAAD +D + +A+ K +TISG L Sbjct: 219 ATCLTYPAIRCKVMIQAADSDDDKRTEAERKAQRTISGAL 258 >ref|XP_002512372.1| peroxisomal membrane protein pmp34, putative [Ricinus communis] gi|223548333|gb|EEF49824.1| peroxisomal membrane protein pmp34, putative [Ricinus communis] Length = 318 Score = 134 bits (336), Expect = 1e-29 Identities = 71/99 (71%), Positives = 81/99 (81%) Frame = +2 Query: 2 DGLGISLLLTSNPAIQYTVFDQLKSRLLMRQRSSKADTESSPEALSAFSAFVLGAVSKSI 181 DGLGISLLLTSNPAIQYTVFDQLK RLL + + + AD+ SS EALSAFSAFVLGAVSKSI Sbjct: 159 DGLGISLLLTSNPAIQYTVFDQLKQRLL-KGKQNTADSSSSVEALSAFSAFVLGAVSKSI 217 Query: 182 ATCLTYPAIRCKVMIQAADVSEDGKDAQPKQSKTISGTL 298 AT +TYPAIRCKVMIQAAD ++ K + K KT+ G + Sbjct: 218 ATVITYPAIRCKVMIQAADSDDESKKGKSKSRKTVPGVV 256 >ref|XP_002517198.1| peroxisomal membrane protein pmp34, putative [Ricinus communis] gi|223543833|gb|EEF45361.1| peroxisomal membrane protein pmp34, putative [Ricinus communis] Length = 427 Score = 133 bits (334), Expect = 2e-29 Identities = 69/100 (69%), Positives = 81/100 (81%), Gaps = 1/100 (1%) Frame = +2 Query: 2 DGLGISLLLTSNPAIQYTVFDQLKSRLLMRQRSSKADTESSPEALSAFSAFVLGAVSKSI 181 DGLGIS+LLTSNPAIQYT FDQLK RLL +Q S K+ T+ SPE+LSAFSAFVLGAVSK Sbjct: 266 DGLGISILLTSNPAIQYTAFDQLKQRLLKQQLSRKSVTDLSPESLSAFSAFVLGAVSKCF 325 Query: 182 ATCLTYPAIRCKVMIQAADVSEDG-KDAQPKQSKTISGTL 298 ATC+TYPAIRCKVM+QAAD E+G D + + +TIS + Sbjct: 326 ATCITYPAIRCKVMLQAADSDENGIGDTELRTKRTISAAM 365