BLASTX nr result

ID: Coptis24_contig00027458 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027458
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551799.1| PREDICTED: uncharacterized protein LOC100786...   166   2e-39
ref|XP_002329274.1| predicted protein [Populus trichocarpa] gi|2...   162   3e-38
ref|XP_003543907.1| PREDICTED: uncharacterized protein LOC100820...   160   1e-37
ref|XP_002279826.1| PREDICTED: uncharacterized protein LOC100248...   160   1e-37
ref|XP_003531911.1| PREDICTED: uncharacterized protein LOC100804...   160   1e-37

>ref|XP_003551799.1| PREDICTED: uncharacterized protein LOC100786993 [Glycine max]
          Length = 304

 Score =  166 bits (419), Expect = 2e-39
 Identities = 83/122 (68%), Positives = 96/122 (78%), Gaps = 1/122 (0%)
 Frame = +3

Query: 27  MTCTVEKPSLSSQRRSEPELNLRDWTLKASISRDTTKSRRHSASNFRTYGKDTKSFRSNT 206
           M  T E    SS+RR E E NLR+W +KA ISR+ T SRR+S S  R++ +DT+SFRSN 
Sbjct: 1   MASTAEPLPYSSRRRDESEFNLREWAVKARISREGTNSRRYSGSYMRSFREDTRSFRSNI 60

Query: 207 NISSTASSPGYISRDEIDPSTYSFTTALKALQARSG-YGWEWLSPEGVALNSKWNEAEKY 383
            ISSTASSPGY+ +DEIDPSTYSFTTALKALQARS  Y WE LSP+G ALNSKWNEAE+Y
Sbjct: 61  TISSTASSPGYLLKDEIDPSTYSFTTALKALQARSSYYSWECLSPDGFALNSKWNEAERY 120

Query: 384 IC 389
           IC
Sbjct: 121 IC 122


>ref|XP_002329274.1| predicted protein [Populus trichocarpa] gi|222870728|gb|EEF07859.1|
           predicted protein [Populus trichocarpa]
          Length = 250

 Score =  162 bits (410), Expect = 3e-38
 Identities = 80/118 (67%), Positives = 93/118 (78%), Gaps = 2/118 (1%)
 Frame = +3

Query: 42  EKPSLSSQRRSEPELNLRDWTLKASISRDTTKSRRHSASNFRTYGKDTKSFRSNTNISST 221
           + P  + QRR EPE NLR+W  +A ISR+ T+SRR S SN R++ +D +SFRSN  ISST
Sbjct: 7   QSPYTNFQRREEPEFNLREWEFRAQISREHTRSRRFSGSNIRSFREDARSFRSNITISST 66

Query: 222 ASSPGYISRDEIDPSTYSFTTALKALQARSGY--GWEWLSPEGVALNSKWNEAEKYIC 389
           ASSPGY  R+EIDPSTYSFTTALKALQARSGY   WE  SP+G AL+SKWNEAEKYIC
Sbjct: 67  ASSPGYSIREEIDPSTYSFTTALKALQARSGYYNSWECSSPDGFALHSKWNEAEKYIC 124


>ref|XP_003543907.1| PREDICTED: uncharacterized protein LOC100820045 [Glycine max]
          Length = 315

 Score =  160 bits (405), Expect = 1e-37
 Identities = 82/123 (66%), Positives = 99/123 (80%), Gaps = 2/123 (1%)
 Frame = +3

Query: 27  MTCTVE-KPSLSSQRRSEPELNLRDWTLKASISRDTTKSRRHSASNFRTYGKDTKSFRSN 203
           M  TVE + S S++++ + + NL +W +KA ISR+ +KSRR+SAS  R++ +DT+SFRSN
Sbjct: 1   MASTVEVQSSYSARKQDDSDFNLTEWAVKARISREKSKSRRYSASYIRSFREDTRSFRSN 60

Query: 204 TNISSTASSPGYISRDEIDPSTYSFTTALKALQARSGY-GWEWLSPEGVALNSKWNEAEK 380
             ISSTASSPGY  +DEIDPSTYSFTTALKALQARS Y  WE LSPEG ALNSKWNEAEK
Sbjct: 61  ITISSTASSPGYPLKDEIDPSTYSFTTALKALQARSAYRSWECLSPEGFALNSKWNEAEK 120

Query: 381 YIC 389
           YIC
Sbjct: 121 YIC 123


>ref|XP_002279826.1| PREDICTED: uncharacterized protein LOC100248073 [Vitis vinifera]
           gi|298204374|emb|CBI16854.3| unnamed protein product
           [Vitis vinifera]
          Length = 301

 Score =  160 bits (405), Expect = 1e-37
 Identities = 80/105 (76%), Positives = 87/105 (82%)
 Frame = +3

Query: 75  EPELNLRDWTLKASISRDTTKSRRHSASNFRTYGKDTKSFRSNTNISSTASSPGYISRDE 254
           EPE NLR+W  KA ISR+ T SRR SASN R   +DT+SFRSN  ISSTASSPGY  RDE
Sbjct: 9   EPEFNLREWARKARISRENTTSRRFSASNIRR--EDTRSFRSNITISSTASSPGYTLRDE 66

Query: 255 IDPSTYSFTTALKALQARSGYGWEWLSPEGVALNSKWNEAEKYIC 389
           IDP+TYSFT+ALKALQARSGYGWE  SP+G ALNSKWNEAEKYIC
Sbjct: 67  IDPATYSFTSALKALQARSGYGWECSSPDGFALNSKWNEAEKYIC 111


>ref|XP_003531911.1| PREDICTED: uncharacterized protein LOC100804073 [Glycine max]
          Length = 305

 Score =  160 bits (404), Expect = 1e-37
 Identities = 80/122 (65%), Positives = 94/122 (77%), Gaps = 1/122 (0%)
 Frame = +3

Query: 27  MTCTVEKPSLSSQRRSEPELNLRDWTLKASISRDTTKSRRHSASNFRTYGKDTKSFRSNT 206
           M  T E    SS+RR E E NLR+W +KA I R+ T SRR+S S  R++ +DT+SFRSN 
Sbjct: 1   MASTAEPLPYSSRRRDESEFNLREWAVKARIRRENTNSRRYSGSYMRSFREDTRSFRSNI 60

Query: 207 NISSTASSPGYISRDEIDPSTYSFTTALKALQARSGYG-WEWLSPEGVALNSKWNEAEKY 383
            ISSTASSPGY  +D+IDPSTYSFTTALKALQAR+GY  W  LSP+G ALNSKWNEAE+Y
Sbjct: 61  TISSTASSPGYPLKDDIDPSTYSFTTALKALQARAGYNRWGCLSPDGFALNSKWNEAERY 120

Query: 384 IC 389
           IC
Sbjct: 121 IC 122


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