BLASTX nr result
ID: Coptis24_contig00027457
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00027457
(1680 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003633481.1| PREDICTED: uncharacterized protein LOC100254... 377 e-102
ref|XP_002534081.1| DNA repair protein RAD50, putative [Ricinus ... 352 2e-94
emb|CAN83583.1| hypothetical protein VITISV_009664 [Vitis vinifera] 324 5e-86
emb|CBI30188.3| unnamed protein product [Vitis vinifera] 313 7e-83
ref|XP_002264975.2| PREDICTED: uncharacterized protein LOC100248... 306 1e-80
>ref|XP_003633481.1| PREDICTED: uncharacterized protein LOC100254715 [Vitis vinifera]
Length = 1395
Score = 377 bits (968), Expect = e-102
Identities = 230/530 (43%), Positives = 322/530 (60%), Gaps = 1/530 (0%)
Frame = -2
Query: 1679 NASFSASGSRISFDSAEGSVDKTTFSPRHDFSGDLYDPIGIQDSPSLRNGGTHGAVPVGD 1500
+ S SASGS SFDS EGS+ + SP++ F+G + D IG QDS S + G+ P D
Sbjct: 204 DTSRSASGSHRSFDSMEGSLGRENLSPQNPFTGVMNDLIGKQDSTSSNSSSLFGSYPAND 263
Query: 1499 HSRSNQTSFNSRFTTSGSNLHSQRQELGHSPSTLAMSSLGNARSSKELLEAAEDTIEELR 1320
SRSN++SFNS+ ++SGS+L +QR + G +A S L NA S K+L EAAE EELR
Sbjct: 264 ISRSNRSSFNSKVSSSGSHLQNQRDDFGRVSHAIATSPLRNAGSCKDL-EAAEGAFEELR 322
Query: 1319 SEAKMWERNARKLMHDLELVRKESSGQSRHQADLDMELSAACTERDSXXXXXXXXXXXXX 1140
+EA+MWE+NARKLMHDLE++RKE S QS++QADLDMEL+A+ TE +
Sbjct: 323 AEARMWEQNARKLMHDLEILRKEFSNQSKNQADLDMELAASHTECNRLRQEIEQLNFLLE 382
Query: 1139 XXXXKNMASEHSISQAEGISHIQKELESEIKFQKESNTNLAVQLEKTQESNIELVSILQE 960
+ +E+ QA+ +++IQ+ELE EIKFQKESN NL +QL+KTQESNIELVS+LQE
Sbjct: 383 ELTVRQKDTENLKLQAQNMNNIQQELEDEIKFQKESNANLTIQLKKTQESNIELVSVLQE 442
Query: 959 LEETIEKQRLEIDAISAERVNLSTEENCEHGNEDMECPNENQDIQKLVEVQKEFQATVCX 780
+EE IEKQ++EI +LS E+N E +E++++ +A
Sbjct: 443 MEEMIEKQKMEI-------TDLSKEKNHE------------------IEIERDLKA---- 473
Query: 779 XXXXXXXXXXXXXXXXXLRRTLLELEADYKYKLSAREVEMMKLEAKLSDLLNTQGSNDNR 600
+ LL+ + ++K KL+A+EV+++ LE KLS+ ++ +
Sbjct: 474 -------------------QALLDCQEEWKCKLAAKEVDIISLETKLSEAIHALNVKETG 514
Query: 599 CSRGIDSDLIKEIETLKEKVQELENDCNELTEENLELIFKLQESKKDLRPGGDXXXXXXX 420
G D +LIKEIE LK KVQELE DC ELT+ENL L FK++ES KDL
Sbjct: 515 PQNGGDHNLIKEIEALKVKVQELERDCVELTDENLSLHFKIKESSKDLMTCAASFKSLSS 574
Query: 419 XXXXXXSATGSEPEVDSLRSQIDQLKQELKNKEMLREGVSSTDLEVQLIDLQNMIGCLEV 240
S SE EV L+SQID+L++ELK KE+L E V++ + ++Q DL N LE+
Sbjct: 575 EFVGNGSPHTSESEVTKLKSQIDRLEEELKQKEILVEEVTANNFQLQCTDLNNKCTDLEL 634
Query: 239 QLHSSQDNACHLEDELRDRQVELEERRMEIISLKQELNVHREK-ETVTEL 93
QL +D ACHL+ EL + + EE+ +EI +L+ +L ++E+ ET T L
Sbjct: 635 QLQIFKDKACHLDSELYNCHTKAEEQEIEIAALQLQLKFYQEETETKTHL 684
>ref|XP_002534081.1| DNA repair protein RAD50, putative [Ricinus communis]
gi|223525882|gb|EEF28304.1| DNA repair protein RAD50,
putative [Ricinus communis]
Length = 1362
Score = 352 bits (902), Expect = 2e-94
Identities = 222/526 (42%), Positives = 309/526 (58%)
Frame = -2
Query: 1673 SFSASGSRISFDSAEGSVDKTTFSPRHDFSGDLYDPIGIQDSPSLRNGGTHGAVPVGDHS 1494
SFSASGSR SFDS +GS+ + T+SP ++ +G + + IG QDS +N +HG+ D S
Sbjct: 166 SFSASGSRYSFDSTDGSLGRETYSPLNNLTGIMNNQIGRQDSTGSQNS-SHGSYSFNDSS 224
Query: 1493 RSNQTSFNSRFTTSGSNLHSQRQELGHSPSTLAMSSLGNARSSKELLEAAEDTIEELRSE 1314
RSNQ+SFNS+ S S+L QR E ++A S L NA SSK+LLEAAE IEELR+E
Sbjct: 225 RSNQSSFNSKVLASRSSLQIQRDEFNQVSRSVASSPLRNAGSSKDLLEAAEAKIEELRAE 284
Query: 1313 AKMWERNARKLMHDLELVRKESSGQSRHQADLDMELSAACTERDSXXXXXXXXXXXXXXX 1134
A+MWE+NARKLM+DLE +RKE S QS+ QA L+MELS + E D
Sbjct: 285 ARMWEQNARKLMNDLEKLRKELSDQSKCQASLEMELSESRRECDGLKQEIEQVKILLEES 344
Query: 1133 XXKNMASEHSISQAEGISHIQKELESEIKFQKESNTNLAVQLEKTQESNIELVSILQELE 954
K ++E+ QA+ + ++QKELE E++F+KESN NLA+QL+KTQESNIELVSILQELE
Sbjct: 345 LVKQKSAENMELQAKDMGNLQKELEDEVRFEKESNANLALQLKKTQESNIELVSILQELE 404
Query: 953 ETIEKQRLEIDAISAERVNLSTEENCEHGNEDMECPNENQDIQKLVEVQKEFQATVCXXX 774
+TIEK ++EI +S E+V +++E EV K
Sbjct: 405 DTIEKLKMEIANLSKEKV------------QELEA----------AEVLK---------- 432
Query: 773 XXXXXXXXXXXXXXXLRRTLLELEADYKYKLSAREVEMMKLEAKLSDLLNTQGSNDNRCS 594
+TL+E EA ++ KL+ +E E++ L++KLS+ L +
Sbjct: 433 ----------------TQTLMECEAQWRDKLAVKEEEIINLKSKLSEALKV-----DNFE 471
Query: 593 RGIDSDLIKEIETLKEKVQELENDCNELTEENLELIFKLQESKKDLRPGGDXXXXXXXXX 414
G D +LIKE+E LK+K++ELE DCNELT+ENLEL+ KL+ES+KDL G
Sbjct: 472 NGADKNLIKEVEVLKQKIEELEKDCNELTDENLELLLKLKESEKDLPICGASSNHLSNEY 531
Query: 413 XXXXSATGSEPEVDSLRSQIDQLKQELKNKEMLREGVSSTDLEVQLIDLQNMIGCLEVQL 234
S + SE EV + S L++EL KEM E +S+ L++Q DL+ LE+ L
Sbjct: 532 EENSSLSISESEVSKMISLKGMLEEELNKKEMFIEQLSTDHLKIQCTDLEKKCADLELHL 591
Query: 233 HSSQDNACHLEDELRDRQVELEERRMEIISLKQELNVHREKETVTE 96
+D +L+ EL EE+ +EI +L+Q+L + KET T+
Sbjct: 592 QDFKDKTSYLDGELSIYHARAEEQGIEITALRQQLESFQGKETETK 637
>emb|CAN83583.1| hypothetical protein VITISV_009664 [Vitis vinifera]
Length = 2427
Score = 324 bits (830), Expect = 5e-86
Identities = 229/571 (40%), Positives = 312/571 (54%), Gaps = 38/571 (6%)
Frame = -2
Query: 1673 SFSASGSRISFDSAEGSVDKTTFSPRHDFSGDLYDPIGIQDSPSLRNGGTHGAVPVGDHS 1494
SFS SGS SFDSA G V + +FS ++ +GD P G DS S + +H D
Sbjct: 205 SFSTSGSNHSFDSAGGFVVRGSFSSANNMNGDGNKPTGRDDSTSSQTSASHDKYTFEDPP 264
Query: 1493 RSNQTSFNSRFTTSGSNLHSQRQELGHSPST-LAMSSLGNARSSKELLEAAEDTIEELRS 1317
+S + FNSR SG+ + ++ S S +A SSL N SSK LLEAAEDTIEELR+
Sbjct: 265 QSIHSLFNSRVMGSGNLSQNPPPDIALSASNVIASSSLTNGGSSKNLLEAAEDTIEELRA 324
Query: 1316 EAKMWERNARKLMHDLELVRKESSGQSRHQADLDMELSAACTERDSXXXXXXXXXXXXXX 1137
EAKMWERN++KLM DLE++RKE S QS++QA LDMELSAA +ERD+
Sbjct: 325 EAKMWERNSQKLMLDLEILRKEFSDQSKNQATLDMELSAAYSERDALKKEIDQLKILLEE 384
Query: 1136 XXXKNMASEHSISQAEGISHIQKELESEIKFQKESNTNLAVQLEKTQESNIELVSILQEL 957
K E S Q EG +HIQKELE EIKFQKESN NLA+QL ++QESNIELVS+LQEL
Sbjct: 385 SKMKQAMGE-STFQDEGATHIQKELEDEIKFQKESNANLALQLRRSQESNIELVSVLQEL 443
Query: 956 EETIEKQRLEIDAISAERVNLSTEENCEHGNEDMECPNENQDI----QKLVEVQKEFQAT 789
E TIEKQ++E++ ++A R+ L+ ++ H E EN+D+ Q+L + +K Q
Sbjct: 444 ELTIEKQKIELEDLAALRLKLNDADSSIH-----ESLAENKDVALQLQQLQDSEKNLQVK 498
Query: 788 V-CXXXXXXXXXXXXXXXXXXLRRTLLELEADYKYKLSAREVEMMKLEAKLSDLLNTQGS 612
V + +L++E YK KLSA+E E++ LEA+LS+ + S
Sbjct: 499 VGFLEQALEDKNHELENERSLSNQAILDVETGYKSKLSAKEEEIVDLEARLSESIKGTNS 558
Query: 611 NDNRCSRGIDSDLIKEIETLKEKVQELENDCNELTEENLELIFKLQESKKDLRPGGDXXX 432
+ G D LIKEIE LK K++ELE DCNELT+ENLEL+FKL+ESK GG
Sbjct: 559 EQMVANNGGDESLIKEIEALKVKLEELERDCNELTDENLELLFKLKESKSK-SMGGSASF 617
Query: 431 XXXXXXXXXXSATGSEPEVDSLRSQIDQLKQELKNK-----------------EMLRE-- 309
S + SE EV L+ QI L+QEL+ K E+ ++
Sbjct: 618 DFSSTEVPAKSYSSSESEVSELKLQICHLEQELEKKVHGEDQLAAFGTSTIFSEVFKQLQ 677
Query: 308 -----------GVSSTDLEVQLIDLQNMIGCLEVQLHSSQDNACHLEDELRDRQVELEER 162
GVSS E D+ N++ V + + +D+ + + L + LE R
Sbjct: 678 MALSQIKKPWYGVSSNVNEECGCDIDNLVDLKSVDVIAQRDHVESILNCLVELNRLLEAR 737
Query: 161 RMEIISLKQ--ELNVHREKETVTELQHTLPE 75
+E +++ E + T+ E Q L +
Sbjct: 738 IIECEEVRKHDEAEIRDGSRTIIEAQKKLED 768
>emb|CBI30188.3| unnamed protein product [Vitis vinifera]
Length = 1369
Score = 313 bits (803), Expect = 7e-83
Identities = 225/561 (40%), Positives = 305/561 (54%), Gaps = 21/561 (3%)
Frame = -2
Query: 1673 SFSASGSRISFDSAEGSVDKTTFSPRHDFSGDLYDPIGIQDSPSLRNGGTHGAVPVGDHS 1494
SFS SGS SFDSA G V + +FS ++ +GD P G DS S + +H D
Sbjct: 190 SFSTSGSNHSFDSAGGFVVRGSFSSANNMNGDGNKPTGRDDSTSSQTSASHDKYTFEDPP 249
Query: 1493 RSNQTSFNSRFTTSGSNLHSQRQELGHSPST-LAMSSLGNARSSKELLEAAEDTIEELRS 1317
+S + FNSR SG+ + ++ S S +A SSL N SSK LLEAAEDTIEELR+
Sbjct: 250 QSIHSLFNSRVMGSGNLSQNPPPDIALSASNVIASSSLTNGGSSKNLLEAAEDTIEELRA 309
Query: 1316 EAKMWERNARKLMHDLELVRKESSGQSRHQADLDMELSAACTERDSXXXXXXXXXXXXXX 1137
EAKMWERN++KLM DLE++RKE S QS++QA LDMELSAA +ERD+
Sbjct: 310 EAKMWERNSQKLMLDLEILRKEFSDQSKNQATLDMELSAAYSERDALKKEIDQLKILLEE 369
Query: 1136 XXXKNMASEHSISQAEGISHIQKELESEIKFQKESNTNLAVQLEKTQESNIELVSILQEL 957
K E S Q EG +HIQKELE EIKFQKESN NLA+QL ++QESNIELVS+LQEL
Sbjct: 370 SKMKQAMGE-STFQDEGATHIQKELEDEIKFQKESNANLALQLRRSQESNIELVSVLQEL 428
Query: 956 EETIEKQRLEIDAISAERVNLSTEENCEHGNEDMECPNENQDIQKLVEVQKEFQATVCXX 777
E TIEKQ++E++ ++A R+ L+ ++ H E EN+D
Sbjct: 429 ELTIEKQKIELEDLAALRLKLNDADSSIH-----ESLAENKD------------------ 465
Query: 776 XXXXXXXXXXXXXXXXLRRTLLELEADYKYKLSAREVEMMKLEAKLSDLLNTQGSNDNRC 597
YK KLSA+E E++ LEA+LS+ + S
Sbjct: 466 -------------------------TGYKSKLSAKEEEIVDLEARLSESIKGTNSEQMVA 500
Query: 596 SRGIDSDLIKEIETLKEKVQELENDCNELTEENLELIFKLQESKKDLRPGGDXXXXXXXX 417
+ G D LIKEIE LK K++ELE DCNELT+ENLEL+FKL+ESK GG
Sbjct: 501 NNGGDESLIKEIEALKVKLEELERDCNELTDENLELLFKLKESKSK-SMGGSASFDFSST 559
Query: 416 XXXXXSATGSEPEVDSLRSQIDQLKQELKNK----EMLREGVSSTDLEVQLIDLQNMIGC 249
S + SE EV L+ QI L+QEL+ K + L +ST LQ +
Sbjct: 560 EVPAKSYSSSESEVSELKLQICHLEQELEKKVHGEDQLAAFGTSTIFSEVFKQLQMALSQ 619
Query: 248 LE-----VQLHSSQDNACHLED----ELRDRQVELEERRMEIISL-------KQELNVHR 117
++ V + +++ C +++ ++ D EL ER+ EII L ++E+ + R
Sbjct: 620 IKKPWYGVSSNVNEECGCDIDNLVDLKITDLDKELTERKSEIIKLEACLLSKEEEIGLLR 679
Query: 116 EKETVTELQHTLPETRFEKAE 54
+ + +E Q + E + EK +
Sbjct: 680 QSQRESESQ--VSELQKEKTQ 698
>ref|XP_002264975.2| PREDICTED: uncharacterized protein LOC100248757 [Vitis vinifera]
Length = 2411
Score = 306 bits (783), Expect = 1e-80
Identities = 222/566 (39%), Positives = 297/566 (52%), Gaps = 33/566 (5%)
Frame = -2
Query: 1673 SFSASGSRISFDSAEGSVDKTTFSPRHDFSGDLYDPIGIQDSPSLRNGGTHGAVPVGDHS 1494
SFS SGS SFDSA G V + +FS ++ +GD P G DS S + +H D
Sbjct: 205 SFSTSGSNHSFDSAGGFVVRGSFSSANNMNGDGNKPTGRDDSTSSQTSASHDKYTFEDPP 264
Query: 1493 RSNQTSFNSRFTTSGSNLHSQRQELGHSPST-LAMSSLGNARSSKELLEAAEDTIEELRS 1317
+S + FNSR SG+ + ++ S S +A SSL N SSK LLEAAEDTIEELR+
Sbjct: 265 QSIHSLFNSRVMGSGNLSQNPPPDIALSASNVIASSSLTNGGSSKNLLEAAEDTIEELRA 324
Query: 1316 EAKMWERNARKLMHDLELVRKESSGQSRHQADLDMELSAACTERDSXXXXXXXXXXXXXX 1137
EAKMWERN++KLM DLE++RKE S QS++QA LDMELSAA +ERD+
Sbjct: 325 EAKMWERNSQKLMLDLEILRKEFSDQSKNQATLDMELSAAYSERDALKKEIDQLKILLEE 384
Query: 1136 XXXKNMASEHSISQAEGISHIQKELESEIKFQKESNTNLAVQLEKTQESNIELVSILQEL 957
K E S Q EG +HIQKELE EIKFQKESN NLA+QL ++QESNIELVS+LQEL
Sbjct: 385 SKMKQAMGE-STFQDEGATHIQKELEDEIKFQKESNANLALQLRRSQESNIELVSVLQEL 443
Query: 956 EETIEKQRLEIDAISAERVNLSTEENCEHGNEDMECPNENQDIQKLVEVQKEFQATVCXX 777
E TIEKQ++E++ ++A R+ L+ ++ H E EN+D
Sbjct: 444 ELTIEKQKIELEDLAALRLKLNDADSSIH-----ESLAENKD------------------ 480
Query: 776 XXXXXXXXXXXXXXXXLRRTLLELEADYKYKLSAREVEMMKLEAKLSDLLNTQGSNDNRC 597
YK KLSA+E E++ LEA+LS+ + S
Sbjct: 481 -------------------------TGYKSKLSAKEEEIVDLEARLSESIKGTNSEQMVA 515
Query: 596 SRGIDSDLIKEIETLKEKVQELENDCNELTEENLELIFKLQESKKDLRPGGDXXXXXXXX 417
+ G D LIKEIE LK K++ELE DCNELT+ENLEL+FKL+ESK GG
Sbjct: 516 NNGGDESLIKEIEALKVKLEELERDCNELTDENLELLFKLKESKSK-SMGGSASFDFSST 574
Query: 416 XXXXXSATGSEPEVDSLRSQIDQLKQELKNK-----------------EMLRE------- 309
S + SE EV L+ QI L+QEL+ K E+ ++
Sbjct: 575 EVPAKSYSSSESEVSELKLQICHLEQELEKKVHGEDQLAAFGTSTIFSEVFKQLQMALSQ 634
Query: 308 ------GVSSTDLEVQLIDLQNMIGCLEVQLHSSQDNACHLEDELRDRQVELEERRMEII 147
GVSS E D+ N++ V + + +D+ + + L + LE R +E
Sbjct: 635 IKKPWYGVSSNVNEECGCDIDNLVDLKSVDVIAQRDHVESILNCLVELNRLLEARIIECE 694
Query: 146 SLKQ--ELNVHREKETVTELQHTLPE 75
+++ E + T+ E Q L +
Sbjct: 695 EVRKHDEAEIRDGSRTIIEAQKKLED 720