BLASTX nr result
ID: Coptis24_contig00027457
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00027457 (1680 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003633481.1| PREDICTED: uncharacterized protein LOC100254... 377 e-102 ref|XP_002534081.1| DNA repair protein RAD50, putative [Ricinus ... 352 2e-94 emb|CAN83583.1| hypothetical protein VITISV_009664 [Vitis vinifera] 324 5e-86 emb|CBI30188.3| unnamed protein product [Vitis vinifera] 313 7e-83 ref|XP_002264975.2| PREDICTED: uncharacterized protein LOC100248... 306 1e-80 >ref|XP_003633481.1| PREDICTED: uncharacterized protein LOC100254715 [Vitis vinifera] Length = 1395 Score = 377 bits (968), Expect = e-102 Identities = 230/530 (43%), Positives = 322/530 (60%), Gaps = 1/530 (0%) Frame = -2 Query: 1679 NASFSASGSRISFDSAEGSVDKTTFSPRHDFSGDLYDPIGIQDSPSLRNGGTHGAVPVGD 1500 + S SASGS SFDS EGS+ + SP++ F+G + D IG QDS S + G+ P D Sbjct: 204 DTSRSASGSHRSFDSMEGSLGRENLSPQNPFTGVMNDLIGKQDSTSSNSSSLFGSYPAND 263 Query: 1499 HSRSNQTSFNSRFTTSGSNLHSQRQELGHSPSTLAMSSLGNARSSKELLEAAEDTIEELR 1320 SRSN++SFNS+ ++SGS+L +QR + G +A S L NA S K+L EAAE EELR Sbjct: 264 ISRSNRSSFNSKVSSSGSHLQNQRDDFGRVSHAIATSPLRNAGSCKDL-EAAEGAFEELR 322 Query: 1319 SEAKMWERNARKLMHDLELVRKESSGQSRHQADLDMELSAACTERDSXXXXXXXXXXXXX 1140 +EA+MWE+NARKLMHDLE++RKE S QS++QADLDMEL+A+ TE + Sbjct: 323 AEARMWEQNARKLMHDLEILRKEFSNQSKNQADLDMELAASHTECNRLRQEIEQLNFLLE 382 Query: 1139 XXXXKNMASEHSISQAEGISHIQKELESEIKFQKESNTNLAVQLEKTQESNIELVSILQE 960 + +E+ QA+ +++IQ+ELE EIKFQKESN NL +QL+KTQESNIELVS+LQE Sbjct: 383 ELTVRQKDTENLKLQAQNMNNIQQELEDEIKFQKESNANLTIQLKKTQESNIELVSVLQE 442 Query: 959 LEETIEKQRLEIDAISAERVNLSTEENCEHGNEDMECPNENQDIQKLVEVQKEFQATVCX 780 +EE IEKQ++EI +LS E+N E +E++++ +A Sbjct: 443 MEEMIEKQKMEI-------TDLSKEKNHE------------------IEIERDLKA---- 473 Query: 779 XXXXXXXXXXXXXXXXXLRRTLLELEADYKYKLSAREVEMMKLEAKLSDLLNTQGSNDNR 600 + LL+ + ++K KL+A+EV+++ LE KLS+ ++ + Sbjct: 474 -------------------QALLDCQEEWKCKLAAKEVDIISLETKLSEAIHALNVKETG 514 Query: 599 CSRGIDSDLIKEIETLKEKVQELENDCNELTEENLELIFKLQESKKDLRPGGDXXXXXXX 420 G D +LIKEIE LK KVQELE DC ELT+ENL L FK++ES KDL Sbjct: 515 PQNGGDHNLIKEIEALKVKVQELERDCVELTDENLSLHFKIKESSKDLMTCAASFKSLSS 574 Query: 419 XXXXXXSATGSEPEVDSLRSQIDQLKQELKNKEMLREGVSSTDLEVQLIDLQNMIGCLEV 240 S SE EV L+SQID+L++ELK KE+L E V++ + ++Q DL N LE+ Sbjct: 575 EFVGNGSPHTSESEVTKLKSQIDRLEEELKQKEILVEEVTANNFQLQCTDLNNKCTDLEL 634 Query: 239 QLHSSQDNACHLEDELRDRQVELEERRMEIISLKQELNVHREK-ETVTEL 93 QL +D ACHL+ EL + + EE+ +EI +L+ +L ++E+ ET T L Sbjct: 635 QLQIFKDKACHLDSELYNCHTKAEEQEIEIAALQLQLKFYQEETETKTHL 684 >ref|XP_002534081.1| DNA repair protein RAD50, putative [Ricinus communis] gi|223525882|gb|EEF28304.1| DNA repair protein RAD50, putative [Ricinus communis] Length = 1362 Score = 352 bits (902), Expect = 2e-94 Identities = 222/526 (42%), Positives = 309/526 (58%) Frame = -2 Query: 1673 SFSASGSRISFDSAEGSVDKTTFSPRHDFSGDLYDPIGIQDSPSLRNGGTHGAVPVGDHS 1494 SFSASGSR SFDS +GS+ + T+SP ++ +G + + IG QDS +N +HG+ D S Sbjct: 166 SFSASGSRYSFDSTDGSLGRETYSPLNNLTGIMNNQIGRQDSTGSQNS-SHGSYSFNDSS 224 Query: 1493 RSNQTSFNSRFTTSGSNLHSQRQELGHSPSTLAMSSLGNARSSKELLEAAEDTIEELRSE 1314 RSNQ+SFNS+ S S+L QR E ++A S L NA SSK+LLEAAE IEELR+E Sbjct: 225 RSNQSSFNSKVLASRSSLQIQRDEFNQVSRSVASSPLRNAGSSKDLLEAAEAKIEELRAE 284 Query: 1313 AKMWERNARKLMHDLELVRKESSGQSRHQADLDMELSAACTERDSXXXXXXXXXXXXXXX 1134 A+MWE+NARKLM+DLE +RKE S QS+ QA L+MELS + E D Sbjct: 285 ARMWEQNARKLMNDLEKLRKELSDQSKCQASLEMELSESRRECDGLKQEIEQVKILLEES 344 Query: 1133 XXKNMASEHSISQAEGISHIQKELESEIKFQKESNTNLAVQLEKTQESNIELVSILQELE 954 K ++E+ QA+ + ++QKELE E++F+KESN NLA+QL+KTQESNIELVSILQELE Sbjct: 345 LVKQKSAENMELQAKDMGNLQKELEDEVRFEKESNANLALQLKKTQESNIELVSILQELE 404 Query: 953 ETIEKQRLEIDAISAERVNLSTEENCEHGNEDMECPNENQDIQKLVEVQKEFQATVCXXX 774 +TIEK ++EI +S E+V +++E EV K Sbjct: 405 DTIEKLKMEIANLSKEKV------------QELEA----------AEVLK---------- 432 Query: 773 XXXXXXXXXXXXXXXLRRTLLELEADYKYKLSAREVEMMKLEAKLSDLLNTQGSNDNRCS 594 +TL+E EA ++ KL+ +E E++ L++KLS+ L + Sbjct: 433 ----------------TQTLMECEAQWRDKLAVKEEEIINLKSKLSEALKV-----DNFE 471 Query: 593 RGIDSDLIKEIETLKEKVQELENDCNELTEENLELIFKLQESKKDLRPGGDXXXXXXXXX 414 G D +LIKE+E LK+K++ELE DCNELT+ENLEL+ KL+ES+KDL G Sbjct: 472 NGADKNLIKEVEVLKQKIEELEKDCNELTDENLELLLKLKESEKDLPICGASSNHLSNEY 531 Query: 413 XXXXSATGSEPEVDSLRSQIDQLKQELKNKEMLREGVSSTDLEVQLIDLQNMIGCLEVQL 234 S + SE EV + S L++EL KEM E +S+ L++Q DL+ LE+ L Sbjct: 532 EENSSLSISESEVSKMISLKGMLEEELNKKEMFIEQLSTDHLKIQCTDLEKKCADLELHL 591 Query: 233 HSSQDNACHLEDELRDRQVELEERRMEIISLKQELNVHREKETVTE 96 +D +L+ EL EE+ +EI +L+Q+L + KET T+ Sbjct: 592 QDFKDKTSYLDGELSIYHARAEEQGIEITALRQQLESFQGKETETK 637 >emb|CAN83583.1| hypothetical protein VITISV_009664 [Vitis vinifera] Length = 2427 Score = 324 bits (830), Expect = 5e-86 Identities = 229/571 (40%), Positives = 312/571 (54%), Gaps = 38/571 (6%) Frame = -2 Query: 1673 SFSASGSRISFDSAEGSVDKTTFSPRHDFSGDLYDPIGIQDSPSLRNGGTHGAVPVGDHS 1494 SFS SGS SFDSA G V + +FS ++ +GD P G DS S + +H D Sbjct: 205 SFSTSGSNHSFDSAGGFVVRGSFSSANNMNGDGNKPTGRDDSTSSQTSASHDKYTFEDPP 264 Query: 1493 RSNQTSFNSRFTTSGSNLHSQRQELGHSPST-LAMSSLGNARSSKELLEAAEDTIEELRS 1317 +S + FNSR SG+ + ++ S S +A SSL N SSK LLEAAEDTIEELR+ Sbjct: 265 QSIHSLFNSRVMGSGNLSQNPPPDIALSASNVIASSSLTNGGSSKNLLEAAEDTIEELRA 324 Query: 1316 EAKMWERNARKLMHDLELVRKESSGQSRHQADLDMELSAACTERDSXXXXXXXXXXXXXX 1137 EAKMWERN++KLM DLE++RKE S QS++QA LDMELSAA +ERD+ Sbjct: 325 EAKMWERNSQKLMLDLEILRKEFSDQSKNQATLDMELSAAYSERDALKKEIDQLKILLEE 384 Query: 1136 XXXKNMASEHSISQAEGISHIQKELESEIKFQKESNTNLAVQLEKTQESNIELVSILQEL 957 K E S Q EG +HIQKELE EIKFQKESN NLA+QL ++QESNIELVS+LQEL Sbjct: 385 SKMKQAMGE-STFQDEGATHIQKELEDEIKFQKESNANLALQLRRSQESNIELVSVLQEL 443 Query: 956 EETIEKQRLEIDAISAERVNLSTEENCEHGNEDMECPNENQDI----QKLVEVQKEFQAT 789 E TIEKQ++E++ ++A R+ L+ ++ H E EN+D+ Q+L + +K Q Sbjct: 444 ELTIEKQKIELEDLAALRLKLNDADSSIH-----ESLAENKDVALQLQQLQDSEKNLQVK 498 Query: 788 V-CXXXXXXXXXXXXXXXXXXLRRTLLELEADYKYKLSAREVEMMKLEAKLSDLLNTQGS 612 V + +L++E YK KLSA+E E++ LEA+LS+ + S Sbjct: 499 VGFLEQALEDKNHELENERSLSNQAILDVETGYKSKLSAKEEEIVDLEARLSESIKGTNS 558 Query: 611 NDNRCSRGIDSDLIKEIETLKEKVQELENDCNELTEENLELIFKLQESKKDLRPGGDXXX 432 + G D LIKEIE LK K++ELE DCNELT+ENLEL+FKL+ESK GG Sbjct: 559 EQMVANNGGDESLIKEIEALKVKLEELERDCNELTDENLELLFKLKESKSK-SMGGSASF 617 Query: 431 XXXXXXXXXXSATGSEPEVDSLRSQIDQLKQELKNK-----------------EMLRE-- 309 S + SE EV L+ QI L+QEL+ K E+ ++ Sbjct: 618 DFSSTEVPAKSYSSSESEVSELKLQICHLEQELEKKVHGEDQLAAFGTSTIFSEVFKQLQ 677 Query: 308 -----------GVSSTDLEVQLIDLQNMIGCLEVQLHSSQDNACHLEDELRDRQVELEER 162 GVSS E D+ N++ V + + +D+ + + L + LE R Sbjct: 678 MALSQIKKPWYGVSSNVNEECGCDIDNLVDLKSVDVIAQRDHVESILNCLVELNRLLEAR 737 Query: 161 RMEIISLKQ--ELNVHREKETVTELQHTLPE 75 +E +++ E + T+ E Q L + Sbjct: 738 IIECEEVRKHDEAEIRDGSRTIIEAQKKLED 768 >emb|CBI30188.3| unnamed protein product [Vitis vinifera] Length = 1369 Score = 313 bits (803), Expect = 7e-83 Identities = 225/561 (40%), Positives = 305/561 (54%), Gaps = 21/561 (3%) Frame = -2 Query: 1673 SFSASGSRISFDSAEGSVDKTTFSPRHDFSGDLYDPIGIQDSPSLRNGGTHGAVPVGDHS 1494 SFS SGS SFDSA G V + +FS ++ +GD P G DS S + +H D Sbjct: 190 SFSTSGSNHSFDSAGGFVVRGSFSSANNMNGDGNKPTGRDDSTSSQTSASHDKYTFEDPP 249 Query: 1493 RSNQTSFNSRFTTSGSNLHSQRQELGHSPST-LAMSSLGNARSSKELLEAAEDTIEELRS 1317 +S + FNSR SG+ + ++ S S +A SSL N SSK LLEAAEDTIEELR+ Sbjct: 250 QSIHSLFNSRVMGSGNLSQNPPPDIALSASNVIASSSLTNGGSSKNLLEAAEDTIEELRA 309 Query: 1316 EAKMWERNARKLMHDLELVRKESSGQSRHQADLDMELSAACTERDSXXXXXXXXXXXXXX 1137 EAKMWERN++KLM DLE++RKE S QS++QA LDMELSAA +ERD+ Sbjct: 310 EAKMWERNSQKLMLDLEILRKEFSDQSKNQATLDMELSAAYSERDALKKEIDQLKILLEE 369 Query: 1136 XXXKNMASEHSISQAEGISHIQKELESEIKFQKESNTNLAVQLEKTQESNIELVSILQEL 957 K E S Q EG +HIQKELE EIKFQKESN NLA+QL ++QESNIELVS+LQEL Sbjct: 370 SKMKQAMGE-STFQDEGATHIQKELEDEIKFQKESNANLALQLRRSQESNIELVSVLQEL 428 Query: 956 EETIEKQRLEIDAISAERVNLSTEENCEHGNEDMECPNENQDIQKLVEVQKEFQATVCXX 777 E TIEKQ++E++ ++A R+ L+ ++ H E EN+D Sbjct: 429 ELTIEKQKIELEDLAALRLKLNDADSSIH-----ESLAENKD------------------ 465 Query: 776 XXXXXXXXXXXXXXXXLRRTLLELEADYKYKLSAREVEMMKLEAKLSDLLNTQGSNDNRC 597 YK KLSA+E E++ LEA+LS+ + S Sbjct: 466 -------------------------TGYKSKLSAKEEEIVDLEARLSESIKGTNSEQMVA 500 Query: 596 SRGIDSDLIKEIETLKEKVQELENDCNELTEENLELIFKLQESKKDLRPGGDXXXXXXXX 417 + G D LIKEIE LK K++ELE DCNELT+ENLEL+FKL+ESK GG Sbjct: 501 NNGGDESLIKEIEALKVKLEELERDCNELTDENLELLFKLKESKSK-SMGGSASFDFSST 559 Query: 416 XXXXXSATGSEPEVDSLRSQIDQLKQELKNK----EMLREGVSSTDLEVQLIDLQNMIGC 249 S + SE EV L+ QI L+QEL+ K + L +ST LQ + Sbjct: 560 EVPAKSYSSSESEVSELKLQICHLEQELEKKVHGEDQLAAFGTSTIFSEVFKQLQMALSQ 619 Query: 248 LE-----VQLHSSQDNACHLED----ELRDRQVELEERRMEIISL-------KQELNVHR 117 ++ V + +++ C +++ ++ D EL ER+ EII L ++E+ + R Sbjct: 620 IKKPWYGVSSNVNEECGCDIDNLVDLKITDLDKELTERKSEIIKLEACLLSKEEEIGLLR 679 Query: 116 EKETVTELQHTLPETRFEKAE 54 + + +E Q + E + EK + Sbjct: 680 QSQRESESQ--VSELQKEKTQ 698 >ref|XP_002264975.2| PREDICTED: uncharacterized protein LOC100248757 [Vitis vinifera] Length = 2411 Score = 306 bits (783), Expect = 1e-80 Identities = 222/566 (39%), Positives = 297/566 (52%), Gaps = 33/566 (5%) Frame = -2 Query: 1673 SFSASGSRISFDSAEGSVDKTTFSPRHDFSGDLYDPIGIQDSPSLRNGGTHGAVPVGDHS 1494 SFS SGS SFDSA G V + +FS ++ +GD P G DS S + +H D Sbjct: 205 SFSTSGSNHSFDSAGGFVVRGSFSSANNMNGDGNKPTGRDDSTSSQTSASHDKYTFEDPP 264 Query: 1493 RSNQTSFNSRFTTSGSNLHSQRQELGHSPST-LAMSSLGNARSSKELLEAAEDTIEELRS 1317 +S + FNSR SG+ + ++ S S +A SSL N SSK LLEAAEDTIEELR+ Sbjct: 265 QSIHSLFNSRVMGSGNLSQNPPPDIALSASNVIASSSLTNGGSSKNLLEAAEDTIEELRA 324 Query: 1316 EAKMWERNARKLMHDLELVRKESSGQSRHQADLDMELSAACTERDSXXXXXXXXXXXXXX 1137 EAKMWERN++KLM DLE++RKE S QS++QA LDMELSAA +ERD+ Sbjct: 325 EAKMWERNSQKLMLDLEILRKEFSDQSKNQATLDMELSAAYSERDALKKEIDQLKILLEE 384 Query: 1136 XXXKNMASEHSISQAEGISHIQKELESEIKFQKESNTNLAVQLEKTQESNIELVSILQEL 957 K E S Q EG +HIQKELE EIKFQKESN NLA+QL ++QESNIELVS+LQEL Sbjct: 385 SKMKQAMGE-STFQDEGATHIQKELEDEIKFQKESNANLALQLRRSQESNIELVSVLQEL 443 Query: 956 EETIEKQRLEIDAISAERVNLSTEENCEHGNEDMECPNENQDIQKLVEVQKEFQATVCXX 777 E TIEKQ++E++ ++A R+ L+ ++ H E EN+D Sbjct: 444 ELTIEKQKIELEDLAALRLKLNDADSSIH-----ESLAENKD------------------ 480 Query: 776 XXXXXXXXXXXXXXXXLRRTLLELEADYKYKLSAREVEMMKLEAKLSDLLNTQGSNDNRC 597 YK KLSA+E E++ LEA+LS+ + S Sbjct: 481 -------------------------TGYKSKLSAKEEEIVDLEARLSESIKGTNSEQMVA 515 Query: 596 SRGIDSDLIKEIETLKEKVQELENDCNELTEENLELIFKLQESKKDLRPGGDXXXXXXXX 417 + G D LIKEIE LK K++ELE DCNELT+ENLEL+FKL+ESK GG Sbjct: 516 NNGGDESLIKEIEALKVKLEELERDCNELTDENLELLFKLKESKSK-SMGGSASFDFSST 574 Query: 416 XXXXXSATGSEPEVDSLRSQIDQLKQELKNK-----------------EMLRE------- 309 S + SE EV L+ QI L+QEL+ K E+ ++ Sbjct: 575 EVPAKSYSSSESEVSELKLQICHLEQELEKKVHGEDQLAAFGTSTIFSEVFKQLQMALSQ 634 Query: 308 ------GVSSTDLEVQLIDLQNMIGCLEVQLHSSQDNACHLEDELRDRQVELEERRMEII 147 GVSS E D+ N++ V + + +D+ + + L + LE R +E Sbjct: 635 IKKPWYGVSSNVNEECGCDIDNLVDLKSVDVIAQRDHVESILNCLVELNRLLEARIIECE 694 Query: 146 SLKQ--ELNVHREKETVTELQHTLPE 75 +++ E + T+ E Q L + Sbjct: 695 EVRKHDEAEIRDGSRTIIEAQKKLED 720