BLASTX nr result

ID: Coptis24_contig00027451 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027451
         (555 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19246.3| unnamed protein product [Vitis vinifera]              109   3e-22
ref|XP_002307345.1| predicted protein [Populus trichocarpa] gi|2...   105   4e-21
ref|XP_002298467.1| predicted protein [Populus trichocarpa] gi|2...    91   2e-16
ref|XP_002514022.1| conserved hypothetical protein [Ricinus comm...    90   2e-16
ref|XP_002276277.2| PREDICTED: uncharacterized protein LOC100246...    89   6e-16

>emb|CBI19246.3| unnamed protein product [Vitis vinifera]
          Length = 900

 Score =  109 bits (273), Expect = 3e-22
 Identities = 78/182 (42%), Positives = 102/182 (56%), Gaps = 6/182 (3%)
 Frame = -2

Query: 554 FDARQMTSTGTQPSS--RNGNVKSNGNLQSQCNTSSEVQPSEPLEFFMEDVPASESVASE 381
           F+A Q  S+     S     NV+++G  Q+Q N+ S +Q S   E  +E+VP   S   +
Sbjct: 446 FEANQKLSSSPPQISLLHQENVENSGKFQTQSNSCSAMQGSYSGEQ-LEEVPVEASSIHK 504

Query: 380 ETDQGLSSFITDSTYKLNEPVPGVRRPAVWARSSARKNLSMESD----EDEAEMQKLEVA 213
              Q  S  I  ST   + P+   +RP VW R+  RKNLSMES     EDE E+Q+LE  
Sbjct: 505 LAGQRSSPHIKKSTTIASGPMN--KRPTVWGRTPGRKNLSMESIDYVVEDEVEIQRLEAW 562

Query: 212 XXXXXXXXXXXXXXNSVLHASLEQRKKALNERRSALEQEVACLQEKLQKERDLRATMEAQ 33
                         N+VL ASLE+RK+ L+E R ALEQ+VA LQE+LQKERDLR  +EA 
Sbjct: 563 KADLQNRIAEESKENAVLQASLERRKRDLHEHRQALEQDVARLQEQLQKERDLRTALEAG 622

Query: 32  LN 27
           LN
Sbjct: 623 LN 624


>ref|XP_002307345.1| predicted protein [Populus trichocarpa] gi|222856794|gb|EEE94341.1|
           predicted protein [Populus trichocarpa]
          Length = 857

 Score =  105 bits (263), Expect = 4e-21
 Identities = 70/177 (39%), Positives = 103/177 (58%), Gaps = 5/177 (2%)
 Frame = -2

Query: 542 QMTSTGTQPSS-RNGNVKSNGNLQSQCNTSSEVQPSEPLEFFMEDVPASESVASEETDQG 366
           +++S   Q SS ++ NV+   ++  Q N S  +Q ++  +  + DV    S+ ++  D  
Sbjct: 422 ELSSCPVQTSSHQHDNVEKREDIPDQSNNSLTMQSNKSDDLSV-DVSTETSLKNKTADHK 480

Query: 365 LSSFITDSTYKLNEPVPGVRRPAVWARSSARKNLSMESD----EDEAEMQKLEVAXXXXX 198
            S      +   NEPV G +RP VW R+SA+KNLSMES     ED+ E+QKLE +     
Sbjct: 481 ASPDAKKPSTISNEPVRG-KRPTVWGRTSAKKNLSMESIDYPIEDDVEIQKLEASKIELQ 539

Query: 197 XXXXXXXXXNSVLHASLEQRKKALNERRSALEQEVACLQEKLQKERDLRATMEAQLN 27
                    N++L A L++RKKAL++ R AL+Q+VA LQE+LQKERD R  +EA LN
Sbjct: 540 NRISEEIKGNAILQAKLKKRKKALHDHRQALQQDVARLQEQLQKERDKRKVLEADLN 596


>ref|XP_002298467.1| predicted protein [Populus trichocarpa] gi|222845725|gb|EEE83272.1|
           predicted protein [Populus trichocarpa]
          Length = 876

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 65/160 (40%), Positives = 87/160 (54%), Gaps = 4/160 (2%)
 Frame = -2

Query: 494 KSNGNLQSQCNTSSEVQPSEPLEFFMEDVPASESVASEETDQGLSSFITDSTYKLNEPVP 315
           K N N  S+ + SS +   E  +  M  + AS    S     GL S    S  K++    
Sbjct: 495 KGNENSTSEMDASSVLPIGESYQS-MGAILASADPVSPILISGLESSAEKSAGKVSASNL 553

Query: 314 GVRRPAVWARSSARKNLSMESDEDEAE----MQKLEVAXXXXXXXXXXXXXXNSVLHASL 147
             +R   W RS+ARK  SMES +  AE    +Q+LE+A              N++L ASL
Sbjct: 554 NGKRSTFWGRSNARKTPSMESVDSSAEEEFAIQRLEIAKNDLRHRIAKEARGNAILQASL 613

Query: 146 EQRKKALNERRSALEQEVACLQEKLQKERDLRATMEAQLN 27
           E+RK+AL+ERR ALEQ+VA LQE+LQ ERDLRA +E  L+
Sbjct: 614 ERRKQALHERRLALEQDVARLQEQLQAERDLRAALEVGLS 653


>ref|XP_002514022.1| conserved hypothetical protein [Ricinus communis]
            gi|223547108|gb|EEF48605.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 980

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 71/185 (38%), Positives = 98/185 (52%), Gaps = 13/185 (7%)
 Frame = -2

Query: 518  PSSRNGNVKSNGNLQSQCNTSSEVQPSEPLEFFMEDVPASESVASEETDQGLSSFITDST 339
            PS R  +   N   +S  N ++    S+ L   + D+ +  ++ +++T    S  I  S+
Sbjct: 512  PSYREVDRGENSLGESNKNLTTLTAESDEL---LGDLSSKTTLENKQTGDP-SVCIKRSS 567

Query: 338  YKLNEPVPGVRRPAVWARSSARKNLSMES----DEDEAEMQKLE---------VAXXXXX 198
               N   P +  P+   R+S RKNLSMES     +DE E+QKLE         +      
Sbjct: 568  SMSNGRAPDINFPSSCGRTSGRKNLSMESLDYHFDDEIEIQKLEATKIDLQHRIXXSDSS 627

Query: 197  XXXXXXXXXNSVLHASLEQRKKALNERRSALEQEVACLQEKLQKERDLRATMEAQLNNPL 18
                     N+VL A+LEQRKKALNERR ALEQ+VA LQE+LQKERD R  +EA LNN  
Sbjct: 628  LYFSMQVKGNAVLQANLEQRKKALNERRLALEQDVARLQEELQKERDKRMVLEAGLNNSQ 687

Query: 17   VQSTI 3
               ++
Sbjct: 688  ANQSV 692


>ref|XP_002276277.2| PREDICTED: uncharacterized protein LOC100246624 [Vitis vinifera]
          Length = 884

 Score = 88.6 bits (218), Expect = 6e-16
 Identities = 62/164 (37%), Positives = 85/164 (51%), Gaps = 6/164 (3%)
 Frame = -2

Query: 494 KSNGNLQSQCNT--SSEVQPSEPLEFFMEDVPASESVASEETDQGLSSFITDSTYKLNEP 321
           K N   +S  N   S  + P+   +  M ++ AS          GL S    +  KL   
Sbjct: 488 KQNKGSESPINEMDSPSILPAVESQRSMGEILASMDPGLPLPVSGLESSAEKAVGKLTSS 547

Query: 320 VPGVRRPAVWARSSARKNLSMES----DEDEAEMQKLEVAXXXXXXXXXXXXXXNSVLHA 153
            P  +R   W RS+ARK  S ES     E+E  +Q+LE+               N++L A
Sbjct: 548 NPNGKRSTFWGRSTARKTPSTESVDSSGEEELAIQRLEITKNDLRHRIAKEARGNAILQA 607

Query: 152 SLEQRKKALNERRSALEQEVACLQEKLQKERDLRATMEAQLNNP 21
           SLE+RK+AL+ERR ALEQ+V+ LQE+LQ ERDLRA +E  L+ P
Sbjct: 608 SLERRKQALHERRLALEQDVSRLQEQLQAERDLRAALEVGLSMP 651


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