BLASTX nr result

ID: Coptis24_contig00027438 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027438
         (206 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263972.1| PREDICTED: uncharacterized protein LOC100242...    74   9e-12
emb|CAN69354.1| hypothetical protein VITISV_014039 [Vitis vinifera]    74   9e-12
ref|XP_004171185.1| PREDICTED: uncharacterized LOC101215899 [Cuc...    72   4e-11
ref|XP_004136940.1| PREDICTED: uncharacterized protein LOC101215...    72   4e-11
ref|XP_002302412.1| predicted protein [Populus trichocarpa] gi|2...    69   5e-10

>ref|XP_002263972.1| PREDICTED: uncharacterized protein LOC100242868 [Vitis vinifera]
          Length = 639

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 40/68 (58%), Positives = 47/68 (69%)
 Frame = +3

Query: 3   FWQETNSRMRRLQEPGSPLSRTPPSSKVMTPTKFIPLKKTISDAPTSSPKNVPMSRTMSS 182
           FWQETNSR+RRLQ+PGSPLS T P S++    KFI  KK  SD P +SP      RTM S
Sbjct: 310 FWQETNSRLRRLQDPGSPLS-TSPGSRMAVAAKFIQSKKFPSDNPLASP------RTMMS 362

Query: 183 PMRGLSRP 206
           P+RG +RP
Sbjct: 363 PIRGATRP 370


>emb|CAN69354.1| hypothetical protein VITISV_014039 [Vitis vinifera]
          Length = 601

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 40/68 (58%), Positives = 47/68 (69%)
 Frame = +3

Query: 3   FWQETNSRMRRLQEPGSPLSRTPPSSKVMTPTKFIPLKKTISDAPTSSPKNVPMSRTMSS 182
           FWQETNSR+RRLQ+PGSPLS T P S++    KFI  KK  SD P +SP      RTM S
Sbjct: 310 FWQETNSRLRRLQDPGSPLS-TSPGSRMAVAAKFIQSKKFPSDNPLASP------RTMMS 362

Query: 183 PMRGLSRP 206
           P+RG +RP
Sbjct: 363 PIRGATRP 370


>ref|XP_004171185.1| PREDICTED: uncharacterized LOC101215899 [Cucumis sativus]
          Length = 514

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 38/68 (55%), Positives = 48/68 (70%)
 Frame = +3

Query: 3   FWQETNSRMRRLQEPGSPLSRTPPSSKVMTPTKFIPLKKTISDAPTSSPKNVPMSRTMSS 182
           FWQETNSR+RRL +PGSPLS T P ++V  P+KF   K+  +D P SSP      RTM+S
Sbjct: 342 FWQETNSRLRRLHDPGSPLS-TSPGARVGAPSKFSQSKRFSNDGPLSSP------RTMAS 394

Query: 183 PMRGLSRP 206
           P+RG +RP
Sbjct: 395 PIRGGTRP 402


>ref|XP_004136940.1| PREDICTED: uncharacterized protein LOC101215899 [Cucumis sativus]
          Length = 667

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 38/68 (55%), Positives = 48/68 (70%)
 Frame = +3

Query: 3   FWQETNSRMRRLQEPGSPLSRTPPSSKVMTPTKFIPLKKTISDAPTSSPKNVPMSRTMSS 182
           FWQETNSR+RRL +PGSPLS T P ++V  P+KF   K+  +D P SSP      RTM+S
Sbjct: 342 FWQETNSRLRRLHDPGSPLS-TSPGARVGAPSKFSQSKRFSNDGPLSSP------RTMAS 394

Query: 183 PMRGLSRP 206
           P+RG +RP
Sbjct: 395 PIRGGTRP 402


>ref|XP_002302412.1| predicted protein [Populus trichocarpa] gi|222844138|gb|EEE81685.1|
           predicted protein [Populus trichocarpa]
          Length = 741

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 38/64 (59%), Positives = 42/64 (65%)
 Frame = +3

Query: 3   FWQETNSRMRRLQEPGSPLSRTPPSSKVMTPTKFIPLKKTISDAPTSSPKNVPMSRTMSS 182
           FWQETNSR+RR  EPGSP+SR     K  TP K I  KK  SD+P SSPK V  SR   S
Sbjct: 314 FWQETNSRIRRQPEPGSPVSRN-NGLKGPTPAKLIAPKKFGSDSPVSSPKGVVNSRGQMS 372

Query: 183 PMRG 194
           P+RG
Sbjct: 373 PIRG 376


Top