BLASTX nr result

ID: Coptis24_contig00027430 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027430
         (462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317996.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|XP_004138296.1| PREDICTED: uncharacterized protein LOC101212...    76   3e-12
emb|CBI15290.3| unnamed protein product [Vitis vinifera]               69   5e-10
ref|XP_002266656.1| PREDICTED: uncharacterized protein LOC100256...    69   5e-10
ref|XP_002511504.1| conserved hypothetical protein [Ricinus comm...    69   5e-10

>ref|XP_002317996.1| predicted protein [Populus trichocarpa] gi|222858669|gb|EEE96216.1|
           predicted protein [Populus trichocarpa]
          Length = 1181

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 53/132 (40%), Positives = 71/132 (53%), Gaps = 2/132 (1%)
 Frame = +3

Query: 69  SFESKVMDSRNESFESIICDPKSCPESSNSERAGSLECIQITLQDLLFKNALLDVHVTKV 248
           S E K  D    S   I C  +S P S +SERA  LE I    Q L+    L   H+ KV
Sbjct: 499 SIEGKEFDGNQLS---IACTIESWPISEDSERAKLLEKIHDVFQALIRHKYLAASHLNKV 555

Query: 249 TKYAMNELHSLIRGS-LEEIGLDQTHLCICLLGAPQLKRIYKFLLEINDSCNKNFQ-AKT 422
            ++ ++EL SL  GS L   G+ QT +CIC LGA QLK+I KFL E++ SC       K+
Sbjct: 556 IQFTVDELQSLATGSQLLNHGVGQTPMCICFLGAFQLKKILKFLQELSHSCGLGMSPEKS 615

Query: 423 SMYETSDTSSLG 458
           S+ +  +T + G
Sbjct: 616 SVVDDMNTGAKG 627


>ref|XP_004138296.1| PREDICTED: uncharacterized protein LOC101212702 [Cucumis sativus]
           gi|449477596|ref|XP_004155067.1| PREDICTED: LOW QUALITY
           PROTEIN: uncharacterized protein LOC101229576 [Cucumis
           sativus]
          Length = 1594

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 49/127 (38%), Positives = 69/127 (54%), Gaps = 1/127 (0%)
 Frame = +3

Query: 75  ESKVMDSRNESFESIICDPKSCPESSNSERAGSLECIQITLQDLLFKNALLDVHVTKVTK 254
           ESK+ +  N S   I   P S P S +SERA  LE I    + L+    L    + K+ +
Sbjct: 508 ESKLYEKINNSGYPI---PDSFPVSDDSERAKLLEKIHAVFELLIKHKYLAASQLNKIIQ 564

Query: 255 YAMNELHSLIRGS-LEEIGLDQTHLCICLLGAPQLKRIYKFLLEINDSCNKNFQAKTSMY 431
           + M+EL  ++ GS L + GLDQT  CIC LGA QL++I KFL E++ SC     +  S  
Sbjct: 565 FTMDELQGIVSGSHLLKQGLDQTPQCICFLGASQLRKILKFLQELSQSCGVGRYSDRSTD 624

Query: 432 ETSDTSS 452
           +  D+ S
Sbjct: 625 QIEDSKS 631


>emb|CBI15290.3| unnamed protein product [Vitis vinifera]
          Length = 1552

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 1/108 (0%)
 Frame = +3

Query: 135 SCPESSNSERAGSLECIQITLQDLLFKNALLDVHVTKVTKYAMNELHSLIRGS-LEEIGL 311
           S P + +SERA  LE I +  + L+    L   H++KV ++  +EL  +  GS L   G+
Sbjct: 464 SWPLADDSERAKLLEKIHVLFEMLIKHKCLAGSHLSKVMQFTTDELQGIASGSQLLNYGV 523

Query: 312 DQTHLCICLLGAPQLKRIYKFLLEINDSCNKNFQAKTSMYETSDTSSL 455
           DQT  CIC LGA QL+++ KFL E++ +C     +  +     D +SL
Sbjct: 524 DQTPTCICFLGASQLRKLLKFLQELSHACGLARSSDKTSSAMDDANSL 571


>ref|XP_002266656.1| PREDICTED: uncharacterized protein LOC100256959 [Vitis vinifera]
          Length = 1653

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 1/108 (0%)
 Frame = +3

Query: 135 SCPESSNSERAGSLECIQITLQDLLFKNALLDVHVTKVTKYAMNELHSLIRGS-LEEIGL 311
           S P + +SERA  LE I +  + L+    L   H++KV ++  +EL  +  GS L   G+
Sbjct: 538 SWPLADDSERAKLLEKIHVLFEMLIKHKCLAGSHLSKVMQFTTDELQGIASGSQLLNYGV 597

Query: 312 DQTHLCICLLGAPQLKRIYKFLLEINDSCNKNFQAKTSMYETSDTSSL 455
           DQT  CIC LGA QL+++ KFL E++ +C     +  +     D +SL
Sbjct: 598 DQTPTCICFLGASQLRKLLKFLQELSHACGLARSSDKTSSAMDDANSL 645


>ref|XP_002511504.1| conserved hypothetical protein [Ricinus communis]
           gi|223550619|gb|EEF52106.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1617

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 45/108 (41%), Positives = 60/108 (55%), Gaps = 2/108 (1%)
 Frame = +3

Query: 135 SCPESSNSERAGSLECIQITLQDLLFKNALLDVHVTKVTKYAMNELHSLIRGS-LEEIGL 311
           S P S + ER   LE I    + L+    L   H+ KV + AM+ELH    GS L   G+
Sbjct: 532 SWPLSEDPERGKLLEKIHAVFEALIKHKYLAASHLNKVIQLAMHELHISANGSQLLNHGV 591

Query: 312 DQTHLCICLLGAPQLKRIYKFLLEINDSCN-KNFQAKTSMYETSDTSS 452
           DQT LCIC L APQL++I KFL E++ +C    +  K S+  T D S+
Sbjct: 592 DQTPLCICFLEAPQLRKILKFLQELSHTCGLGRYSEKNSI--TDDVSA 637


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