BLASTX nr result

ID: Coptis24_contig00027421 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027421
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311814.1| predicted protein [Populus trichocarpa] gi|2...   229   2e-58
ref|XP_002336154.1| predicted protein [Populus trichocarpa] gi|2...   228   4e-58
ref|XP_002277102.1| PREDICTED: uncharacterized protein LOC100263...   224   4e-57
emb|CBI26140.3| unnamed protein product [Vitis vinifera]              224   4e-57
ref|XP_002516835.1| inosine-uridine preferring nucleoside hydrol...   223   2e-56

>ref|XP_002311814.1| predicted protein [Populus trichocarpa] gi|222851634|gb|EEE89181.1|
            predicted protein [Populus trichocarpa]
          Length = 921

 Score =  229 bits (583), Expect = 2e-58
 Identities = 109/142 (76%), Positives = 124/142 (87%)
 Frame = +2

Query: 2    HMMGRDDIPVGRGQVFAMGQPDPSSPAAGDCKYIRAIPHGSGGSLDSDTLYGYARNLPRS 181
            HMMGRDDIPVG G+VFAM Q DP   A GDCKY++AIPHGSGG LDSDTLYG AR+LPRS
Sbjct: 587  HMMGRDDIPVGLGEVFAMNQSDPVFSAVGDCKYLKAIPHGSGGLLDSDTLYGLARDLPRS 646

Query: 182  PRRYTAENSVKFGAPRDTDHPELRQPLALEVWQSITNSTLPGSKISILTNGPLSNLAQII 361
            PRRYTAENSVK+GAPRDTDHPELRQPLALE+W SI  +  PGSKI+ILTNGPL++LA+II
Sbjct: 647  PRRYTAENSVKYGAPRDTDHPELRQPLALEIWDSIVRTLDPGSKITILTNGPLTSLAKII 706

Query: 362  LSEKNVSSVIEHVYVVGGHINN 427
             +E N SSVI+ VYVVGGHI++
Sbjct: 707  QNENNTSSVIQDVYVVGGHISH 728



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 45/157 (28%), Positives = 72/157 (45%), Gaps = 15/157 (9%)
 Frame = +2

Query: 2   HMMGRDDIPVGRGQVFAMGQ-----PD---------PSSPAAGDCKYIRAIPHGSGGSLD 139
           +MMGRDD+ VG G    + +     PD           +  AG C+Y +AIP G GG LD
Sbjct: 100 YMMGRDDLSVGMGGEGGIKEDGHILPDVGGYLPIVEQGNATAGGCRYRQAIPVGLGGRLD 159

Query: 140 SDTLYGYARN-LPRSPRRYTAENSVKFGAPRDTDHPELRQPLALEVWQSITNSTLPGSKI 316
            D+ YG  +  LP+  R+Y+                 L+QP A    Q +    +    I
Sbjct: 160 IDSNYGIRKAFLPQGSRKYS----------------PLQQPTA----QQVLIEKVSAGPI 199

Query: 317 SILTNGPLSNLAQIILSEKNVSSVIEHVYVVGGHINN 427
           +I   G  +N+   ++   ++   I+H+YV+GG + +
Sbjct: 200 TIFIIGAHTNIGIFLMKNPHLKKNIQHIYVMGGGVRS 236


>ref|XP_002336154.1| predicted protein [Populus trichocarpa] gi|222874440|gb|EEF11571.1|
           predicted protein [Populus trichocarpa]
          Length = 872

 Score =  228 bits (581), Expect = 4e-58
 Identities = 109/142 (76%), Positives = 123/142 (86%)
 Frame = +2

Query: 2   HMMGRDDIPVGRGQVFAMGQPDPSSPAAGDCKYIRAIPHGSGGSLDSDTLYGYARNLPRS 181
           HMMGRDDIPVG G VFAM Q DP   A GDCKY++AIPHGSGG LDSDTLYG AR+LPRS
Sbjct: 534 HMMGRDDIPVGLGDVFAMNQSDPVFSAVGDCKYLKAIPHGSGGLLDSDTLYGLARDLPRS 593

Query: 182 PRRYTAENSVKFGAPRDTDHPELRQPLALEVWQSITNSTLPGSKISILTNGPLSNLAQII 361
           PRRYTAENSVK+GAPRDTDHPELRQPLALE+W SI  +  PGSKI+ILTNGPL++LA+II
Sbjct: 594 PRRYTAENSVKYGAPRDTDHPELRQPLALEIWDSIVRTLDPGSKITILTNGPLTSLAKII 653

Query: 362 LSEKNVSSVIEHVYVVGGHINN 427
            +E N SSVI+ VYVVGGHI++
Sbjct: 654 QNENNTSSVIQDVYVVGGHISH 675



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 46/157 (29%), Positives = 72/157 (45%), Gaps = 15/157 (9%)
 Frame = +2

Query: 2   HMMGRDDIPVGRGQVFAMGQ-----PD---------PSSPAAGDCKYIRAIPHGSGGSLD 139
           +MMGRDD+ VG G    + +     PD              AG C+Y +AIP G  G LD
Sbjct: 87  YMMGRDDVSVGMGGEGGIAEDGHIFPDVGGFLPIVEQGKSTAGGCRYRQAIPVGPRGRLD 146

Query: 140 SDTLYGYARN-LPRSPRRYTAENSVKFGAPRDTDHPELRQPLALEVWQSITNSTLPGSKI 316
            D+ YG  R  LP+  R+Y+                 L QP A    Q +    +    I
Sbjct: 147 LDSNYGLRRAFLPQGSRKYSP----------------LEQPTA----QQVLTEKISAGPI 186

Query: 317 SILTNGPLSNLAQIILSEKNVSSVIEHVYVVGGHINN 427
           ++L  G  +N+   +++  ++ + IEH+YV+GG + +
Sbjct: 187 TVLITGAHTNIGVFLMNNPHLKNNIEHIYVMGGAVRS 223


>ref|XP_002277102.1| PREDICTED: uncharacterized protein LOC100263026 [Vitis vinifera]
          Length = 1054

 Score =  224 bits (572), Expect = 4e-57
 Identities = 106/142 (74%), Positives = 122/142 (85%)
 Frame = +2

Query: 2    HMMGRDDIPVGRGQVFAMGQPDPSSPAAGDCKYIRAIPHGSGGSLDSDTLYGYARNLPRS 181
            HMMGRDDIPVG G V+AM Q DP   + GDCKY++AIPHGSGG LDSDTLYG+AR+LPRS
Sbjct: 720  HMMGRDDIPVGLGDVYAMNQSDPIFSSVGDCKYVKAIPHGSGGFLDSDTLYGFARHLPRS 779

Query: 182  PRRYTAENSVKFGAPRDTDHPELRQPLALEVWQSITNSTLPGSKISILTNGPLSNLAQII 361
            PRRYTAENSVKFGAPRDTDHPELRQPLAL+VW S+  +   GSKI+ILTNGPL+ LA II
Sbjct: 780  PRRYTAENSVKFGAPRDTDHPELRQPLALDVWDSVLKTLDSGSKITILTNGPLTTLANII 839

Query: 362  LSEKNVSSVIEHVYVVGGHINN 427
            LS KN +S+I+ VYVVGGHI++
Sbjct: 840  LSRKNTTSLIQDVYVVGGHISH 861



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 48/158 (30%), Positives = 73/158 (46%), Gaps = 16/158 (10%)
 Frame = +2

Query: 2   HMMGRDDIPVGRGQVFAMGQPDPSSP--------------AAGDCKYIRAIPHGS-GGSL 136
           +MMGRDDIPVG G    + +     P                G C+Y +AIP G  GG L
Sbjct: 249 YMMGRDDIPVGVGGEGGIREDGTILPNVGGYLPIIEQGLTTTGGCRYRQAIPKGRYGGIL 308

Query: 137 DSDTLYGYARN-LPRSPRRYTAENSVKFGAPRDTDHPELRQPLALEVWQSITNSTLPGSK 313
           D D+ YG  +  LP+  R+Y               HP L+QP A    Q +   T+    
Sbjct: 309 DIDSNYGIRKAFLPQGSRKY---------------HP-LQQPTA----QQVMIDTISSGP 348

Query: 314 ISILTNGPLSNLAQIILSEKNVSSVIEHVYVVGGHINN 427
           I++   G  +N A  +++  ++   I+H+YV+GG + +
Sbjct: 349 INVFVIGGHTNFAIFLMNNPHLKKNIKHIYVMGGGVRS 386


>emb|CBI26140.3| unnamed protein product [Vitis vinifera]
          Length = 893

 Score =  224 bits (572), Expect = 4e-57
 Identities = 106/142 (74%), Positives = 122/142 (85%)
 Frame = +2

Query: 2   HMMGRDDIPVGRGQVFAMGQPDPSSPAAGDCKYIRAIPHGSGGSLDSDTLYGYARNLPRS 181
           HMMGRDDIPVG G V+AM Q DP   + GDCKY++AIPHGSGG LDSDTLYG+AR+LPRS
Sbjct: 559 HMMGRDDIPVGLGDVYAMNQSDPIFSSVGDCKYVKAIPHGSGGFLDSDTLYGFARHLPRS 618

Query: 182 PRRYTAENSVKFGAPRDTDHPELRQPLALEVWQSITNSTLPGSKISILTNGPLSNLAQII 361
           PRRYTAENSVKFGAPRDTDHPELRQPLAL+VW S+  +   GSKI+ILTNGPL+ LA II
Sbjct: 619 PRRYTAENSVKFGAPRDTDHPELRQPLALDVWDSVLKTLDSGSKITILTNGPLTTLANII 678

Query: 362 LSEKNVSSVIEHVYVVGGHINN 427
           LS KN +S+I+ VYVVGGHI++
Sbjct: 679 LSRKNTTSLIQDVYVVGGHISH 700



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 48/158 (30%), Positives = 73/158 (46%), Gaps = 16/158 (10%)
 Frame = +2

Query: 2   HMMGRDDIPVGRGQVFAMGQPDPSSP--------------AAGDCKYIRAIPHGS-GGSL 136
           +MMGRDDIPVG G    + +     P                G C+Y +AIP G  GG L
Sbjct: 88  YMMGRDDIPVGVGGEGGIREDGTILPNVGGYLPIIEQGLTTTGGCRYRQAIPKGRYGGIL 147

Query: 137 DSDTLYGYARN-LPRSPRRYTAENSVKFGAPRDTDHPELRQPLALEVWQSITNSTLPGSK 313
           D D+ YG  +  LP+  R+Y               HP L+QP A    Q +   T+    
Sbjct: 148 DIDSNYGIRKAFLPQGSRKY---------------HP-LQQPTA----QQVMIDTISSGP 187

Query: 314 ISILTNGPLSNLAQIILSEKNVSSVIEHVYVVGGHINN 427
           I++   G  +N A  +++  ++   I+H+YV+GG + +
Sbjct: 188 INVFVIGGHTNFAIFLMNNPHLKKNIKHIYVMGGGVRS 225


>ref|XP_002516835.1| inosine-uridine preferring nucleoside hydrolase, putative [Ricinus
           communis] gi|223543923|gb|EEF45449.1| inosine-uridine
           preferring nucleoside hydrolase, putative [Ricinus
           communis]
          Length = 885

 Score =  223 bits (567), Expect = 2e-56
 Identities = 107/142 (75%), Positives = 119/142 (83%)
 Frame = +2

Query: 2   HMMGRDDIPVGRGQVFAMGQPDPSSPAAGDCKYIRAIPHGSGGSLDSDTLYGYARNLPRS 181
           HMMGRDDIPVG G VFA  Q D    A GDCKY++ IPHGSGG LDSDTLYG AR+LPRS
Sbjct: 554 HMMGRDDIPVGLGNVFARNQSDRIFSAVGDCKYVKVIPHGSGGFLDSDTLYGLARDLPRS 613

Query: 182 PRRYTAENSVKFGAPRDTDHPELRQPLALEVWQSITNSTLPGSKISILTNGPLSNLAQII 361
           PRRYTA NSVKFGAPRDTDHPELRQPLALEVW ++     PGSKISILTNGPL++LA+II
Sbjct: 614 PRRYTAHNSVKFGAPRDTDHPELRQPLALEVWDTVVRKLEPGSKISILTNGPLTSLAEII 673

Query: 362 LSEKNVSSVIEHVYVVGGHINN 427
           LS+ N SSVI+ VYVVGGHI++
Sbjct: 674 LSDNNASSVIKDVYVVGGHISH 695


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