BLASTX nr result
ID: Coptis24_contig00027412
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00027412 (327 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002514548.1| rubisco subunit binding-protein beta subunit... 144 6e-33 ref|XP_002269341.2| PREDICTED: chaperonin 60 subunit beta 4, chl... 140 1e-31 emb|CBI27426.3| unnamed protein product [Vitis vinifera] 140 1e-31 ref|XP_004155289.1| PREDICTED: LOW QUALITY PROTEIN: chaperonin 6... 135 3e-30 ref|XP_004135135.1| PREDICTED: chaperonin 60 subunit beta 4, chl... 135 3e-30 >ref|XP_002514548.1| rubisco subunit binding-protein beta subunit, rubb, putative [Ricinus communis] gi|223546152|gb|EEF47654.1| rubisco subunit binding-protein beta subunit, rubb, putative [Ricinus communis] Length = 592 Score = 144 bits (364), Expect = 6e-33 Identities = 70/88 (79%), Positives = 80/88 (90%) Frame = +1 Query: 64 LVDKKVIHLKYFFRILDNAVKEKYPVVIIAEGIEKDALTPLIRNKLRGALKAVAIKAPAF 243 LVDKK+ + K F+ILDNAVKEKYP+V++AEGIE++AL P+IRNKLRGALKA AIKAPAF Sbjct: 257 LVDKKITNPKEMFKILDNAVKEKYPIVVVAEGIEQEALAPVIRNKLRGALKAAAIKAPAF 316 Query: 244 GERKSHYLDDIAILTGATVVRDEMGLNL 327 GERK HYLDDIAILTGATV+RDEMGL L Sbjct: 317 GERKGHYLDDIAILTGATVIRDEMGLTL 344 >ref|XP_002269341.2| PREDICTED: chaperonin 60 subunit beta 4, chloroplastic-like [Vitis vinifera] Length = 610 Score = 140 bits (353), Expect = 1e-31 Identities = 68/88 (77%), Positives = 78/88 (88%) Frame = +1 Query: 64 LVDKKVIHLKYFFRILDNAVKEKYPVVIIAEGIEKDALTPLIRNKLRGALKAVAIKAPAF 243 LVDKK+ + K F+ILDNAVKEKYP+VI+AEGIE++AL P+IRNKLRG LKA AIKAPAF Sbjct: 248 LVDKKITNPKEMFKILDNAVKEKYPIVIVAEGIEQEALAPVIRNKLRGVLKAAAIKAPAF 307 Query: 244 GERKSHYLDDIAILTGATVVRDEMGLNL 327 GERKSHYLDD+AILTG TV+ DEMGL L Sbjct: 308 GERKSHYLDDLAILTGGTVISDEMGLTL 335 >emb|CBI27426.3| unnamed protein product [Vitis vinifera] Length = 584 Score = 140 bits (353), Expect = 1e-31 Identities = 68/88 (77%), Positives = 78/88 (88%) Frame = +1 Query: 64 LVDKKVIHLKYFFRILDNAVKEKYPVVIIAEGIEKDALTPLIRNKLRGALKAVAIKAPAF 243 LVDKK+ + K F+ILDNAVKEKYP+VI+AEGIE++AL P+IRNKLRG LKA AIKAPAF Sbjct: 222 LVDKKITNPKEMFKILDNAVKEKYPIVIVAEGIEQEALAPVIRNKLRGVLKAAAIKAPAF 281 Query: 244 GERKSHYLDDIAILTGATVVRDEMGLNL 327 GERKSHYLDD+AILTG TV+ DEMGL L Sbjct: 282 GERKSHYLDDLAILTGGTVISDEMGLTL 309 >ref|XP_004155289.1| PREDICTED: LOW QUALITY PROTEIN: chaperonin 60 subunit beta 4, chloroplastic-like [Cucumis sativus] Length = 597 Score = 135 bits (341), Expect = 3e-30 Identities = 68/88 (77%), Positives = 76/88 (86%) Frame = +1 Query: 64 LVDKKVIHLKYFFRILDNAVKEKYPVVIIAEGIEKDALTPLIRNKLRGALKAVAIKAPAF 243 LVDKK+ K F+ILDNAVKEKYP+VI+AEGIE +AL P+IRNKLRG LKA AIKAPAF Sbjct: 269 LVDKKISDPKEMFKILDNAVKEKYPIVILAEGIEPEALAPVIRNKLRGVLKAAAIKAPAF 328 Query: 244 GERKSHYLDDIAILTGATVVRDEMGLNL 327 GERKSHYLDDIA LTGATVVR++ GL L Sbjct: 329 GERKSHYLDDIATLTGATVVREDNGLTL 356 >ref|XP_004135135.1| PREDICTED: chaperonin 60 subunit beta 4, chloroplastic-like [Cucumis sativus] Length = 597 Score = 135 bits (341), Expect = 3e-30 Identities = 68/88 (77%), Positives = 76/88 (86%) Frame = +1 Query: 64 LVDKKVIHLKYFFRILDNAVKEKYPVVIIAEGIEKDALTPLIRNKLRGALKAVAIKAPAF 243 LVDKK+ K F+ILDNAVKEKYP+VI+AEGIE +AL P+IRNKLRG LKA AIKAPAF Sbjct: 269 LVDKKISDPKEMFKILDNAVKEKYPIVILAEGIEPEALAPVIRNKLRGVLKAAAIKAPAF 328 Query: 244 GERKSHYLDDIAILTGATVVRDEMGLNL 327 GERKSHYLDDIA LTGATVVR++ GL L Sbjct: 329 GERKSHYLDDIATLTGATVVREDNGLTL 356