BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027389
         (214 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308068.1| predicted protein [Populus trichocarpa] gi|2...    65   7e-19
ref|XP_003541476.1| PREDICTED: topless-related protein 4-like [G...    65   1e-18
ref|XP_003549747.1| PREDICTED: topless-related protein 4-like [G...    65   1e-18
ref|XP_002527178.1| WD-repeat protein, putative [Ricinus communi...    66   7e-18
ref|XP_002324641.1| predicted protein [Populus trichocarpa] gi|2...    63   5e-17

>ref|XP_002308068.1| predicted protein [Populus trichocarpa] gi|222854044|gb|EEE91591.1|
           predicted protein [Populus trichocarpa]
          Length = 1132

 Score = 64.7 bits (156), Expect(2) = 7e-19
 Identities = 29/36 (80%), Positives = 34/36 (94%)
 Frame = +3

Query: 3   SKIWKLSEINEPSQCRSLKLPDNLLPVRVSRLIYTN 110
           S+IWKL+EINEPSQCRSL+LPD+L  +RVSRLIYTN
Sbjct: 748 SRIWKLTEINEPSQCRSLRLPDSLTSMRVSRLIYTN 783



 Score = 53.9 bits (128), Expect(2) = 7e-19
 Identities = 22/26 (84%), Positives = 26/26 (100%)
 Frame = +2

Query: 119 SILALASNAVHKLWKWQRNERNPTGR 196
           +ILALASNAVHKLWKWQRN+RNP+G+
Sbjct: 787 AILALASNAVHKLWKWQRNDRNPSGK 812


>ref|XP_003541476.1| PREDICTED: topless-related protein 4-like [Glycine max]
          Length = 1232

 Score = 65.5 bits (158), Expect(2) = 1e-18
 Identities = 30/36 (83%), Positives = 34/36 (94%)
 Frame = +3

Query: 3   SKIWKLSEINEPSQCRSLKLPDNLLPVRVSRLIYTN 110
           S+IWKL+EINEPSQCRSLKLPD+L  +RVSRLIYTN
Sbjct: 850 SRIWKLTEINEPSQCRSLKLPDSLSSMRVSRLIYTN 885



 Score = 52.4 bits (124), Expect(2) = 1e-18
 Identities = 22/26 (84%), Positives = 25/26 (96%)
 Frame = +2

Query: 119 SILALASNAVHKLWKWQRNERNPTGR 196
           +ILALA+NAVHKLWKWQRNERN TG+
Sbjct: 889 AILALAANAVHKLWKWQRNERNTTGK 914


>ref|XP_003549747.1| PREDICTED: topless-related protein 4-like [Glycine max]
          Length = 1134

 Score = 65.5 bits (158), Expect(2) = 1e-18
 Identities = 30/36 (83%), Positives = 34/36 (94%)
 Frame = +3

Query: 3   SKIWKLSEINEPSQCRSLKLPDNLLPVRVSRLIYTN 110
           S+IWKL+EINEPSQCRSLKLPD+L  +RVSRLIYTN
Sbjct: 752 SRIWKLTEINEPSQCRSLKLPDSLSSMRVSRLIYTN 787



 Score = 52.4 bits (124), Expect(2) = 1e-18
 Identities = 22/26 (84%), Positives = 25/26 (96%)
 Frame = +2

Query: 119 SILALASNAVHKLWKWQRNERNPTGR 196
           +ILALA+NAVHKLWKWQRNERN TG+
Sbjct: 791 AILALAANAVHKLWKWQRNERNTTGK 816


>ref|XP_002527178.1| WD-repeat protein, putative [Ricinus communis]
           gi|223533443|gb|EEF35191.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 1134

 Score = 66.2 bits (160), Expect(2) = 7e-18
 Identities = 29/36 (80%), Positives = 34/36 (94%)
 Frame = +3

Query: 3   SKIWKLSEINEPSQCRSLKLPDNLLPVRVSRLIYTN 110
           S+IWKL+E+NEPSQCRSL+LPDNL  +RVSRLIYTN
Sbjct: 751 SRIWKLTEVNEPSQCRSLRLPDNLTAMRVSRLIYTN 786



 Score = 48.9 bits (115), Expect(2) = 7e-18
 Identities = 20/26 (76%), Positives = 24/26 (92%)
 Frame = +2

Query: 119 SILALASNAVHKLWKWQRNERNPTGR 196
           S+L LASNAVHKLWKWQRN+RN +G+
Sbjct: 790 SLLGLASNAVHKLWKWQRNDRNLSGK 815


>ref|XP_002324641.1| predicted protein [Populus trichocarpa] gi|222866075|gb|EEF03206.1|
           predicted protein [Populus trichocarpa]
          Length = 1126

 Score = 63.2 bits (152), Expect(2) = 5e-17
 Identities = 28/36 (77%), Positives = 34/36 (94%)
 Frame = +3

Query: 3   SKIWKLSEINEPSQCRSLKLPDNLLPVRVSRLIYTN 110
           S+IWKL+EINEPSQCRSL+LPD+L  +RVSRLI+TN
Sbjct: 742 SRIWKLTEINEPSQCRSLRLPDSLTAMRVSRLIFTN 777



 Score = 49.3 bits (116), Expect(2) = 5e-17
 Identities = 21/26 (80%), Positives = 24/26 (92%)
 Frame = +2

Query: 119 SILALASNAVHKLWKWQRNERNPTGR 196
           +ILALASNAVHKLWKWQRN+RN  G+
Sbjct: 781 AILALASNAVHKLWKWQRNDRNLPGK 806