BLASTX nr result
ID: Coptis24_contig00027378
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00027378 (538 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ... 83 2e-14 emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera] 83 3e-14 ref|XP_002279526.2| PREDICTED: LOW QUALITY PROTEIN: F-box protei... 77 2e-12 ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ... 70 2e-10 emb|CAN66619.1| hypothetical protein VITISV_028369 [Vitis vinifera] 70 3e-10 >ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera] Length = 389 Score = 83.2 bits (204), Expect = 2e-14 Identities = 62/191 (32%), Positives = 94/191 (49%), Gaps = 15/191 (7%) Frame = -2 Query: 528 IRDTYIQKAIIISTPQHVEVVVCIVYTR----LFFCMPEKDDEWNYVRNSDSKKLGITGY 361 +RD++I+K I+ S+P + + +V L C + DD W ++ ++ S Sbjct: 157 MRDSFIKKTILSSSPANGSDFIAVVILNQTGDLALCR-KSDDSWTFLEDAQSYAE----- 210 Query: 360 IDVTYCRGKLYTVIFDGSLFVVEGLEGPTPVTKMLICDEGYHYGRGELNLVESSGELLKI 181 DV + RG Y V GS+ V + + G +P ++ I + +G LVES ELL + Sbjct: 211 -DVIFHRGLFYAVNKYGSIAVCD-VSGSSP--RVSIIEMPQQFGGDLQYLVESGEELLLV 266 Query: 180 KAIRDERKT-----------TLSFKVSELDFEECKWVEVNDLGDRAIFVGFSYSFSLSAS 34 D T F+V LD + +W V+ LGDRA+F+G + S SLS+ Sbjct: 267 TRYLDLTYDVEPDQTSLIYRTTRFQVCRLDLKAPRWEVVSSLGDRALFLGENLSLSLSSV 326 Query: 33 DFPGCVRNCIY 1 DFPGC NCIY Sbjct: 327 DFPGCKGNCIY 337 >emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera] Length = 389 Score = 82.8 bits (203), Expect = 3e-14 Identities = 62/191 (32%), Positives = 94/191 (49%), Gaps = 15/191 (7%) Frame = -2 Query: 528 IRDTYIQKAIIISTPQHVEVVVCIVYTR----LFFCMPEKDDEWNYVRNSDSKKLGITGY 361 +RD++I+K I+ S+P + + +V L C + DD W ++ ++ S Sbjct: 157 MRDSFIKKTILSSSPANGSDFIAVVILNQTGDLALCR-KSDDSWTFLEDAQSYSE----- 210 Query: 360 IDVTYCRGKLYTVIFDGSLFVVEGLEGPTPVTKMLICDEGYHYGRGELNLVESSGELLKI 181 DV + RG Y V GS+ V + + G +P ++ I + +G LVES ELL + Sbjct: 211 -DVIFHRGLFYAVNKYGSIAVCD-VSGSSP--RVSIIEMPQQFGGDLQYLVESGEELLLV 266 Query: 180 KAIRDERKT-----------TLSFKVSELDFEECKWVEVNDLGDRAIFVGFSYSFSLSAS 34 D T F+V LD + +W V+ LGDRA+F+G + S SLS+ Sbjct: 267 TRYLDLTYDVEXDQTSLIYRTTRFQVCRLDSKAPRWEVVSSLGDRALFLGENLSLSLSSV 326 Query: 33 DFPGCVRNCIY 1 DFPGC NCIY Sbjct: 327 DFPGCKGNCIY 337 >ref|XP_002279526.2| PREDICTED: LOW QUALITY PROTEIN: F-box protein SKIP23-like [Vitis vinifera] Length = 387 Score = 77.0 bits (188), Expect = 2e-12 Identities = 59/173 (34%), Positives = 78/173 (45%), Gaps = 25/173 (14%) Frame = -2 Query: 447 RLFFCMPEKDDEWNYV----------RNSDSKKLGI----TGYIDVTYCRGKLYTVIFDG 310 ++ FC DD W R+ D K + I + Y DV + GK Y V G Sbjct: 159 KVAFCSGNGDDFWLLTIHLSGKLAMFRSGDKKWMIIDDMQSPYDDVIFFDGKFYAVDNTG 218 Query: 309 SLFVVEGLEGPTPVTKMLICDEGYHYGRGELNLVESSGELLKIKA-----------IRDE 163 VV+ +G +PV + +G + LVES GELL + +R Sbjct: 219 RTVVVDVADGSSPVVNLAASSV---FGGDKKVLVESEGELLLVDTYFTMYHDDDEHVRWM 275 Query: 162 RKTTLSFKVSELDFEECKWVEVNDLGDRAIFVGFSYSFSLSASDFPGCVRNCI 4 + + FKV LD E KWVE+ LGDR +F+G SFS ASDF GC N I Sbjct: 276 IERMIHFKVFRLDQREQKWVEIESLGDRLLFLGDDSSFSARASDFYGCKGNSI 328 >ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis] gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase, putative [Ricinus communis] Length = 398 Score = 70.1 bits (170), Expect = 2e-10 Identities = 55/194 (28%), Positives = 90/194 (46%), Gaps = 18/194 (9%) Frame = -2 Query: 528 IRDTYIQKAIIISTP----QHVEVVVCIVYTRLFFCMPEKDDEWNYVRNSDSKKLGITGY 361 +RD++I+K ++ S+P V + + L +C D W+ V N+ S Sbjct: 160 MRDSFIRKVVLSSSPLKDNNFVVIAILNQTDDLAYCR-NGDKSWSLVENARSF------C 212 Query: 360 IDVTYCRGKLYTVIFDGSLFVVEGLEGPTPVTKMLICDEGYHYGRGELN-LVESSGELLK 184 DV + G Y V G + + + + +P + E G++ LV S ELL Sbjct: 213 EDVIFVNGMFYAVNKAGQIVICD-ISSDSPRVSFM---ETPRQAGGDMQYLVNSGDELLL 268 Query: 183 IKAIRDERKT-------------TLSFKVSELDFEECKWVEVNDLGDRAIFVGFSYSFSL 43 + D T+ F+V LD+ +W+ ++ LGD+A+F+G + S SL Sbjct: 269 VTRYLDLEYEFDHPDMEPHLIYRTIRFEVFRLDWNGPQWLRMSTLGDKALFIGENSSLSL 328 Query: 42 SASDFPGCVRNCIY 1 SA+DF GC+ NCIY Sbjct: 329 SATDFSGCMGNCIY 342 >emb|CAN66619.1| hypothetical protein VITISV_028369 [Vitis vinifera] Length = 986 Score = 69.7 bits (169), Expect = 3e-10 Identities = 45/141 (31%), Positives = 72/141 (51%), Gaps = 1/141 (0%) Frame = -2 Query: 420 DDEWNYVRNSDSKKLGITGYIDVTYCRGKLYTVIFDGSLFVVEGLEGPTPVTKMLICDEG 241 +++W+ + + K + + DV Y +G+ Y + + G + V++ K Sbjct: 205 EEKWSLIDDGAEK----SHFDDVIYYKGRFYAIDYKGRIVVIDA-----DSLKATELASP 255 Query: 240 YHYGRG-ELNLVESSGELLKIKAIRDERKTTLSFKVSELDFEECKWVEVNDLGDRAIFVG 64 H RG + VES GEL + D + F+V + EE KW V+D+GDR +FVG Sbjct: 256 VHGSRGTHKHFVESFGEL---DIVADVPDYPVHFEVFKFIEEEQKWDWVSDIGDRVLFVG 312 Query: 63 FSYSFSLSASDFPGCVRNCIY 1 +FSLS++DFPG NC+Y Sbjct: 313 DDRTFSLSSTDFPGFKGNCVY 333 Score = 55.5 bits (132), Expect = 5e-06 Identities = 44/157 (28%), Positives = 71/157 (45%), Gaps = 17/157 (10%) Frame = -2 Query: 420 DDEWNYVRNSDSKKLGITGYIDVTYCRGKLYTVIFDGSLFVVEGLEGPTPVTKMLICDEG 241 + +W+ + + K + + DV Y +G+ Y + + G + V++ K Sbjct: 595 EKKWSLIDDGAEK----SHFDDVIYYKGRFYAIDYXGRIVVIDA-----DSLKATELASP 645 Query: 240 YHYGRGE-LNLVESSGELLKIKAIRDERKTTLSFKVSEL-----DF-----------EEC 112 H RG + VES GEL + D+ T S++ D+ EE Sbjct: 646 VHGSRGNHRHFVESFGELFLV----DKYVVTFCNNYSDIVSVVPDYPVHXEVFKFIEEEQ 701 Query: 111 KWVEVNDLGDRAIFVGFSYSFSLSASDFPGCVRNCIY 1 KW V+ +GDR +FV +FSLS++DFPG NC+Y Sbjct: 702 KWDWVSGIGDRVLFVDDDRTFSLSSTDFPGFKGNCVY 738