BLASTX nr result
ID: Coptis24_contig00027371
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00027371 (913 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002516804.1| conserved hypothetical protein [Ricinus comm... 78 3e-12 ref|XP_003638382.1| Nuclear transcription factor Y subunit A-7, ... 72 1e-10 ref|XP_003594083.1| F-box/kelch-repeat protein [Medicago truncat... 70 5e-10 ref|XP_003605465.1| F-box/kelch-repeat protein [Medicago truncat... 68 3e-09 ref|XP_003546120.1| PREDICTED: F-box/kelch-repeat protein At3g23... 66 1e-08 >ref|XP_002516804.1| conserved hypothetical protein [Ricinus communis] gi|223543892|gb|EEF45418.1| conserved hypothetical protein [Ricinus communis] Length = 316 Score = 78.2 bits (191), Expect = 3e-12 Identities = 52/165 (31%), Positives = 83/165 (50%), Gaps = 6/165 (3%) Frame = -1 Query: 910 FLNGAFYW--LAYGKGKYSKAIISFDIEQKAFREVQKPVCMGKLAEVTIGVTIGKLRGKL 737 ++N W ++ G I+SFDI+++ ++EV +P E+ T+G L G L Sbjct: 159 YVNCTLNWPVMSEGDSGLMWIIVSFDIKRETYKEVMQP----DYGELVYDRTLGVLDGCL 214 Query: 736 CMYCKYYDETGIEIWVMEDYGPRVSWFKLLAIPEAGYRRQSYDLASHYTLNSMPICFAKN 557 C+ C Y+ + WVM++YG R SW +L+ +P Y S + S+P A N Sbjct: 215 CVMCNYH-AVRADFWVMKEYGVRESWIRLVTVPYLDYP------GSLHLQYSVPYAIADN 267 Query: 556 DKVVLMDKSNLVFYDLKQKTGRRLEIHNNLDWSK----IDRLVTP 434 +V+L KS+LV Y+ T + I+N+ W ID LV+P Sbjct: 268 GEVLLEFKSSLVIYNPNYGTFKYPVINNSCSWVDAEVYIDSLVSP 312 >ref|XP_003638382.1| Nuclear transcription factor Y subunit A-7, partial [Medicago truncatula] gi|355504317|gb|AES85520.1| Nuclear transcription factor Y subunit A-7, partial [Medicago truncatula] Length = 455 Score = 72.4 bits (176), Expect = 1e-10 Identities = 46/156 (29%), Positives = 81/156 (51%), Gaps = 2/156 (1%) Frame = -1 Query: 910 FLNGAFYWLAYGKGKYSKAII-SFDIEQKAFREVQKPVCMGKLAEVTIGVTIGKLRGKLC 734 F++G WLA Y+ +II S D+E++ ++E+ +P K V + T+ LR ++C Sbjct: 251 FVSGTVNWLASNDSSYTSSIIVSLDLEKETYQELLQPDYGAKAVNV-VTKTLAVLRDRMC 309 Query: 733 MYCKYYDETGIEIWVMEDYGPRVSWFKLLAIPEAG-YRRQSYDLASHYTLNSMPICFAKN 557 + + T ++W+ME+YG R +W KL +P G R Y A + T ++ Sbjct: 310 ILA--HSHTFFDVWLMEEYGNRETWTKLFRVPYIGNVGRCPYTNALYVT---------ED 358 Query: 556 DKVVLMDKSNLVFYDLKQKTGRRLEIHNNLDWSKID 449 D+V+L ++ LV Y+ + T + LE N W ++ Sbjct: 359 DQVLLENQFELVVYNSRDGTSKTLEFPNIKGWMVLE 394 >ref|XP_003594083.1| F-box/kelch-repeat protein [Medicago truncatula] gi|355483131|gb|AES64334.1| F-box/kelch-repeat protein [Medicago truncatula] Length = 366 Score = 70.5 bits (171), Expect = 5e-10 Identities = 53/166 (31%), Positives = 82/166 (49%), Gaps = 6/166 (3%) Frame = -1 Query: 910 FLNGAFYWLA-YGKGKYSK-AIISFDIEQKAFREVQKPVCMGKLAEVTIGVTIGKLRGKL 737 F++G W + Y G S I+S D+E++ +REV P E ++ L+G L Sbjct: 211 FVSGTLNWASNYSIGSSSFWTIVSLDLEKETYREVLPP---DYEKEECSTPSLSVLKGCL 267 Query: 736 CMYCKYYDETGIEIWVMEDYGPRVSWFKLLAIPEAGYRRQSYDLASHYTLNSMPICFAKN 557 CM Y +T +W+M+DYG R SW KLL IP Y D + S P C ++N Sbjct: 268 CMNYDY-KKTDFVVWLMKDYGVRESWIKLLTIP---YLPNPEDFS-----YSGPYCISEN 318 Query: 556 DKVVLMDKSNLVFYDLKQKTGRRLEIHNNLDWSK----IDRLVTPV 431 +V+LM + +L+ YD + + R I W ++ LV+P+ Sbjct: 319 GEVLLMFEFDLILYDPRDHSFRYPRIEGGKGWFDAEVYVESLVSPM 364 >ref|XP_003605465.1| F-box/kelch-repeat protein [Medicago truncatula] gi|355506520|gb|AES87662.1| F-box/kelch-repeat protein [Medicago truncatula] Length = 369 Score = 68.2 bits (165), Expect = 3e-09 Identities = 43/173 (24%), Positives = 86/173 (49%), Gaps = 13/173 (7%) Frame = -1 Query: 913 IFLNGAFYWLAYG--KGKYSKAIISFDIEQKAFREVQKPVCMGKLAEVTIGVTIGKLRGK 740 I ++G W AY G +S+ I+S D+ ++ ++E+ +P E I +T+G +R Sbjct: 203 IIVSGTVNWFAYSTASGDFSRVIVSLDLGKECYQEISEP----NYDEKPIYLTLGMMRDC 258 Query: 739 LCMYCKYYDETGIEIWVMEDYGPRVSWFKLLAIPEAGYRRQSYDLASHYTLNSMPICFA- 563 LC++ Y + ++W+M++YG + SW KL+ +P G D + + I + Sbjct: 259 LCIFS--YSHSFTDVWLMKEYGNKESWIKLIHLPYFGDHDSHDDNIHYQKIYGQKILYIF 316 Query: 562 --KNDKVVLMDKS----NLVFYDLKQKTGRRLEIHNNLDWSK----IDRLVTP 434 +ND +++++K V D K T + +I + W + ++ L++P Sbjct: 317 EDENDVLLVVNKEFKKWKWVVCDSKNYTIKSFKIQKDFGWLESKVYVESLISP 369 >ref|XP_003546120.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Glycine max] Length = 393 Score = 66.2 bits (160), Expect = 1e-08 Identities = 40/146 (27%), Positives = 75/146 (51%) Frame = -1 Query: 910 FLNGAFYWLAYGKGKYSKAIISFDIEQKAFREVQKPVCMGKLAEVTIGVTIGKLRGKLCM 731 F++G WLA S I+S D+ ++++ EV +P + +T+G LR LC+ Sbjct: 244 FVSGTVNWLASNDSS-SLIIVSLDLHKESYEEVLQPY----YGVAVVNLTLGVLRDCLCV 298 Query: 730 YCKYYDETGIEIWVMEDYGPRVSWFKLLAIPEAGYRRQSYDLASHYTLNSMPICFAKNDK 551 + +T +++W+M+DYG + SW KL +P G S L + +C +++D+ Sbjct: 299 LS--HADTFLDVWLMKDYGNKESWTKLFRVPYMG--------ISDSYLYTKALCISEDDQ 348 Query: 550 VVLMDKSNLVFYDLKQKTGRRLEIHN 473 V++ S L Y+ + T + +I + Sbjct: 349 VLMEFNSELAVYNSRNGTSKIPDIQD 374