BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027371
         (913 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516804.1| conserved hypothetical protein [Ricinus comm...    78   3e-12
ref|XP_003638382.1| Nuclear transcription factor Y subunit A-7, ...    72   1e-10
ref|XP_003594083.1| F-box/kelch-repeat protein [Medicago truncat...    70   5e-10
ref|XP_003605465.1| F-box/kelch-repeat protein [Medicago truncat...    68   3e-09
ref|XP_003546120.1| PREDICTED: F-box/kelch-repeat protein At3g23...    66   1e-08

>ref|XP_002516804.1| conserved hypothetical protein [Ricinus communis]
           gi|223543892|gb|EEF45418.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 316

 Score = 78.2 bits (191), Expect = 3e-12
 Identities = 52/165 (31%), Positives = 83/165 (50%), Gaps = 6/165 (3%)
 Frame = -1

Query: 910 FLNGAFYW--LAYGKGKYSKAIISFDIEQKAFREVQKPVCMGKLAEVTIGVTIGKLRGKL 737
           ++N    W  ++ G       I+SFDI+++ ++EV +P       E+    T+G L G L
Sbjct: 159 YVNCTLNWPVMSEGDSGLMWIIVSFDIKRETYKEVMQP----DYGELVYDRTLGVLDGCL 214

Query: 736 CMYCKYYDETGIEIWVMEDYGPRVSWFKLLAIPEAGYRRQSYDLASHYTLNSMPICFAKN 557
           C+ C Y+     + WVM++YG R SW +L+ +P   Y        S +   S+P   A N
Sbjct: 215 CVMCNYH-AVRADFWVMKEYGVRESWIRLVTVPYLDYP------GSLHLQYSVPYAIADN 267

Query: 556 DKVVLMDKSNLVFYDLKQKTGRRLEIHNNLDWSK----IDRLVTP 434
            +V+L  KS+LV Y+    T +   I+N+  W      ID LV+P
Sbjct: 268 GEVLLEFKSSLVIYNPNYGTFKYPVINNSCSWVDAEVYIDSLVSP 312


>ref|XP_003638382.1| Nuclear transcription factor Y subunit A-7, partial [Medicago
           truncatula] gi|355504317|gb|AES85520.1| Nuclear
           transcription factor Y subunit A-7, partial [Medicago
           truncatula]
          Length = 455

 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 46/156 (29%), Positives = 81/156 (51%), Gaps = 2/156 (1%)
 Frame = -1

Query: 910 FLNGAFYWLAYGKGKYSKAII-SFDIEQKAFREVQKPVCMGKLAEVTIGVTIGKLRGKLC 734
           F++G   WLA     Y+ +II S D+E++ ++E+ +P    K   V +  T+  LR ++C
Sbjct: 251 FVSGTVNWLASNDSSYTSSIIVSLDLEKETYQELLQPDYGAKAVNV-VTKTLAVLRDRMC 309

Query: 733 MYCKYYDETGIEIWVMEDYGPRVSWFKLLAIPEAG-YRRQSYDLASHYTLNSMPICFAKN 557
           +    +  T  ++W+ME+YG R +W KL  +P  G   R  Y  A + T         ++
Sbjct: 310 ILA--HSHTFFDVWLMEEYGNRETWTKLFRVPYIGNVGRCPYTNALYVT---------ED 358

Query: 556 DKVVLMDKSNLVFYDLKQKTGRRLEIHNNLDWSKID 449
           D+V+L ++  LV Y+ +  T + LE  N   W  ++
Sbjct: 359 DQVLLENQFELVVYNSRDGTSKTLEFPNIKGWMVLE 394


>ref|XP_003594083.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355483131|gb|AES64334.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 366

 Score = 70.5 bits (171), Expect = 5e-10
 Identities = 53/166 (31%), Positives = 82/166 (49%), Gaps = 6/166 (3%)
 Frame = -1

Query: 910 FLNGAFYWLA-YGKGKYSK-AIISFDIEQKAFREVQKPVCMGKLAEVTIGVTIGKLRGKL 737
           F++G   W + Y  G  S   I+S D+E++ +REV  P       E     ++  L+G L
Sbjct: 211 FVSGTLNWASNYSIGSSSFWTIVSLDLEKETYREVLPP---DYEKEECSTPSLSVLKGCL 267

Query: 736 CMYCKYYDETGIEIWVMEDYGPRVSWFKLLAIPEAGYRRQSYDLASHYTLNSMPICFAKN 557
           CM   Y  +T   +W+M+DYG R SW KLL IP   Y     D +      S P C ++N
Sbjct: 268 CMNYDY-KKTDFVVWLMKDYGVRESWIKLLTIP---YLPNPEDFS-----YSGPYCISEN 318

Query: 556 DKVVLMDKSNLVFYDLKQKTGRRLEIHNNLDWSK----IDRLVTPV 431
            +V+LM + +L+ YD +  + R   I     W      ++ LV+P+
Sbjct: 319 GEVLLMFEFDLILYDPRDHSFRYPRIEGGKGWFDAEVYVESLVSPM 364


>ref|XP_003605465.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355506520|gb|AES87662.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 369

 Score = 68.2 bits (165), Expect = 3e-09
 Identities = 43/173 (24%), Positives = 86/173 (49%), Gaps = 13/173 (7%)
 Frame = -1

Query: 913 IFLNGAFYWLAYG--KGKYSKAIISFDIEQKAFREVQKPVCMGKLAEVTIGVTIGKLRGK 740
           I ++G   W AY    G +S+ I+S D+ ++ ++E+ +P       E  I +T+G +R  
Sbjct: 203 IIVSGTVNWFAYSTASGDFSRVIVSLDLGKECYQEISEP----NYDEKPIYLTLGMMRDC 258

Query: 739 LCMYCKYYDETGIEIWVMEDYGPRVSWFKLLAIPEAGYRRQSYDLASHYTLNSMPICFA- 563
           LC++   Y  +  ++W+M++YG + SW KL+ +P  G      D   +  +    I +  
Sbjct: 259 LCIFS--YSHSFTDVWLMKEYGNKESWIKLIHLPYFGDHDSHDDNIHYQKIYGQKILYIF 316

Query: 562 --KNDKVVLMDKS----NLVFYDLKQKTGRRLEIHNNLDWSK----IDRLVTP 434
             +ND +++++K       V  D K  T +  +I  +  W +    ++ L++P
Sbjct: 317 EDENDVLLVVNKEFKKWKWVVCDSKNYTIKSFKIQKDFGWLESKVYVESLISP 369


>ref|XP_003546120.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Glycine max]
          Length = 393

 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 40/146 (27%), Positives = 75/146 (51%)
 Frame = -1

Query: 910 FLNGAFYWLAYGKGKYSKAIISFDIEQKAFREVQKPVCMGKLAEVTIGVTIGKLRGKLCM 731
           F++G   WLA      S  I+S D+ ++++ EV +P          + +T+G LR  LC+
Sbjct: 244 FVSGTVNWLASNDSS-SLIIVSLDLHKESYEEVLQPY----YGVAVVNLTLGVLRDCLCV 298

Query: 730 YCKYYDETGIEIWVMEDYGPRVSWFKLLAIPEAGYRRQSYDLASHYTLNSMPICFAKNDK 551
               + +T +++W+M+DYG + SW KL  +P  G         S   L +  +C +++D+
Sbjct: 299 LS--HADTFLDVWLMKDYGNKESWTKLFRVPYMG--------ISDSYLYTKALCISEDDQ 348

Query: 550 VVLMDKSNLVFYDLKQKTGRRLEIHN 473
           V++   S L  Y+ +  T +  +I +
Sbjct: 349 VLMEFNSELAVYNSRNGTSKIPDIQD 374