BLASTX nr result

ID: Coptis24_contig00027369 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027369
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29057.3| unnamed protein product [Vitis vinifera]              116   2e-24
ref|XP_002272694.1| PREDICTED: uncharacterized protein LOC100251...   116   2e-24
ref|XP_002307167.1| predicted protein [Populus trichocarpa] gi|2...   113   1e-23
ref|XP_004164133.1| PREDICTED: uncharacterized LOC101224517 [Cuc...   108   3e-22
ref|XP_003534677.1| PREDICTED: uncharacterized protein LOC100782...   107   8e-22

>emb|CBI29057.3| unnamed protein product [Vitis vinifera]
          Length = 383

 Score =  116 bits (290), Expect = 2e-24
 Identities = 59/89 (66%), Positives = 68/89 (76%), Gaps = 4/89 (4%)
 Frame = -1

Query: 268 TSYNRLGRDATETDAEEIIDMASKAALADQQKQVQENIHSQIKSFSTLMDEILVPNFKNS 89
           TSYNRLGR+A E DAE IIDMA KA+LADQQKQVQENIHSQIK+F   +D +L+P+ KN 
Sbjct: 123 TSYNRLGRNADEADAENIIDMAGKASLADQQKQVQENIHSQIKTFCNTLDGVLLPDSKNM 182

Query: 88  ND----PPNISGVPRRSGLSFAVGKGGPP 14
           N+     P     PRRSGLSFAVG+ GPP
Sbjct: 183 NELPESCPQTKATPRRSGLSFAVGRDGPP 211


>ref|XP_002272694.1| PREDICTED: uncharacterized protein LOC100251105 [Vitis vinifera]
          Length = 405

 Score =  116 bits (290), Expect = 2e-24
 Identities = 59/89 (66%), Positives = 68/89 (76%), Gaps = 4/89 (4%)
 Frame = -1

Query: 268 TSYNRLGRDATETDAEEIIDMASKAALADQQKQVQENIHSQIKSFSTLMDEILVPNFKNS 89
           TSYNRLGR+A E DAE IIDMA KA+LADQQKQVQENIHSQIK+F   +D +L+P+ KN 
Sbjct: 41  TSYNRLGRNADEADAENIIDMAGKASLADQQKQVQENIHSQIKTFCNTLDGVLLPDSKNM 100

Query: 88  ND----PPNISGVPRRSGLSFAVGKGGPP 14
           N+     P     PRRSGLSFAVG+ GPP
Sbjct: 101 NELPESCPQTKATPRRSGLSFAVGRDGPP 129


>ref|XP_002307167.1| predicted protein [Populus trichocarpa] gi|222856616|gb|EEE94163.1|
           predicted protein [Populus trichocarpa]
          Length = 402

 Score =  113 bits (283), Expect = 1e-23
 Identities = 58/93 (62%), Positives = 71/93 (76%), Gaps = 4/93 (4%)
 Frame = -1

Query: 268 TSYNRLGRDATETDAEEIIDMASKAALADQQKQVQENIHSQIKSFSTLMDEILVPNF--- 98
           TSYNRLG++A E DAEEII+MASKA++ADQQKQVQENIH QI +F + M+EIL+P+    
Sbjct: 41  TSYNRLGKNAEEADAEEIIEMASKASVADQQKQVQENIHFQITNFCSAMNEILLPDLEKR 100

Query: 97  -KNSNDPPNISGVPRRSGLSFAVGKGGPPPNQP 2
            K    P   +  PRRSGLSFAVGK GPP ++P
Sbjct: 101 SKKDEAPAQSNAAPRRSGLSFAVGKSGPPIDRP 133


>ref|XP_004164133.1| PREDICTED: uncharacterized LOC101224517 [Cucumis sativus]
          Length = 135

 Score =  108 bits (271), Expect = 3e-22
 Identities = 57/85 (67%), Positives = 65/85 (76%)
 Frame = -1

Query: 268 TSYNRLGRDATETDAEEIIDMASKAALADQQKQVQENIHSQIKSFSTLMDEILVPNFKNS 89
           TSYNRLG DATE DAEEIIDMASKA+ ADQQKQVQENIHSQ+KSF   MD IL+P+ + +
Sbjct: 47  TSYNRLGMDATEADAEEIIDMASKASFADQQKQVQENIHSQVKSFCMHMDGILLPD-EPA 105

Query: 88  NDPPNISGVPRRSGLSFAVGKGGPP 14
             P       R+SGLSFAVG+  PP
Sbjct: 106 ESPEKSKDAVRKSGLSFAVGRTSPP 130


>ref|XP_003534677.1| PREDICTED: uncharacterized protein LOC100782005 [Glycine max]
          Length = 402

 Score =  107 bits (268), Expect = 8e-22
 Identities = 55/85 (64%), Positives = 64/85 (75%)
 Frame = -1

Query: 265 SYNRLGRDATETDAEEIIDMASKAALADQQKQVQENIHSQIKSFSTLMDEILVPNFKNSN 86
           SYN LG++A E  AEEII+MASKA+ ADQQ QVQEN+HSQIK+F T MDEIL+PN K  N
Sbjct: 42  SYNHLGKNADEAHAEEIIEMASKASFADQQMQVQENVHSQIKTFCTFMDEILLPNEKMVN 101

Query: 85  DPPNISGVPRRSGLSFAVGKGGPPP 11
           +    + VPRRSGL FAVG    PP
Sbjct: 102 EHQLQNTVPRRSGLGFAVGSRNDPP 126


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