BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027361
         (728 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635571.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   170   1e-61
ref|XP_004143411.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   159   8e-60
ref|XP_003536072.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   162   3e-58
ref|NP_195217.1| DEAD-box ATP-dependent RNA helicase 16 [Arabido...   161   3e-57
ref|XP_002867100.1| hypothetical protein ARALYDRAFT_491167 [Arab...   160   6e-57

>ref|XP_003635571.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 16-like, partial
           [Vitis vinifera]
          Length = 301

 Score =  170 bits (430), Expect(2) = 1e-61
 Identities = 89/120 (74%), Positives = 94/120 (78%)
 Frame = +2

Query: 368 SSSTLKIAPSVFVLVPTRELSQQVYSEVLSLIESCRVQLKVVQLTGGMPASDLRATLAGR 547
           S S  K+APS FVLVPTREL QQVYSEVLSLIE CR QLKVVQLT  M  SDLR  LAG 
Sbjct: 90  SESRNKLAPSAFVLVPTRELCQQVYSEVLSLIELCRGQLKVVQLTSSMSPSDLRVALAGP 149

Query: 548 PDILVSTPACISTCMSTNALSTKSIQDSLSILVLDEADLLLSYGYEDDLKSLISHVPRRC 727
           PDILVSTP CI  C+S   L   SI +SL ILVLDEADLLLSYGYEDDLK+L +HVPRRC
Sbjct: 150 PDILVSTPGCIPKCLSAGVLQAASIIESLEILVLDEADLLLSYGYEDDLKALTAHVPRRC 209



 Score = 93.2 bits (230), Expect(2) = 1e-61
 Identities = 46/56 (82%), Positives = 50/56 (89%)
 Frame = +3

Query: 198 LGLDPRLIRSLTKKDISKPTPIQSIAIPLILEGKDVVARAKTGSGKTYAYLLPSLQ 365
           LGL+P LIR+L KK I KPTPIQ +AIPLILEGKDVVARAKTGSGKT+AYLLP LQ
Sbjct: 29  LGLEPSLIRALIKKGIEKPTPIQEVAIPLILEGKDVVARAKTGSGKTFAYLLPLLQ 84


>ref|XP_004143411.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 16-like [Cucumis
           sativus] gi|449508529|ref|XP_004163338.1| PREDICTED:
           DEAD-box ATP-dependent RNA helicase 16-like [Cucumis
           sativus]
          Length = 596

 Score =  159 bits (403), Expect(2) = 8e-60
 Identities = 80/122 (65%), Positives = 92/122 (75%)
 Frame = +2

Query: 362 SNSSSTLKIAPSVFVLVPTRELSQQVYSEVLSLIESCRVQLKVVQLTGGMPASDLRATLA 541
           + SS+  K  PS  VLVPTRELSQQVY E+ SLIE+CRVQ+KV QLT  M  SDLR  LA
Sbjct: 85  TGSSTKKKSGPSAVVLVPTRELSQQVYKEISSLIETCRVQVKVAQLTSSMSHSDLRTALA 144

Query: 542 GRPDILVSTPACISTCMSTNALSTKSIQDSLSILVLDEADLLLSYGYEDDLKSLISHVPR 721
           G PDI+V+TPACI  C+S   L   SI +SL ILVLDEADLLLSYGYEDD+K+  +HVPR
Sbjct: 145 GPPDIIVATPACIPKCLSAGVLQPTSINESLEILVLDEADLLLSYGYEDDIKAFAAHVPR 204

Query: 722 RC 727
            C
Sbjct: 205 SC 206



 Score = 97.4 bits (241), Expect(2) = 8e-60
 Identities = 47/56 (83%), Positives = 52/56 (92%)
 Frame = +3

Query: 198 LGLDPRLIRSLTKKDISKPTPIQSIAIPLILEGKDVVARAKTGSGKTYAYLLPSLQ 365
           LGLDPRL+R+L KK+I KPTPIQ +AIPLILEGKDVVARAKTGSGKT+AYLLP LQ
Sbjct: 26  LGLDPRLVRALIKKEIQKPTPIQHVAIPLILEGKDVVARAKTGSGKTFAYLLPLLQ 81


>ref|XP_003536072.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 16-like [Glycine
           max]
          Length = 601

 Score =  162 bits (409), Expect(2) = 3e-58
 Identities = 83/124 (66%), Positives = 96/124 (77%)
 Frame = +2

Query: 356 FASNSSSTLKIAPSVFVLVPTRELSQQVYSEVLSLIESCRVQLKVVQLTGGMPASDLRAT 535
           F +NS    K+AP+ FVLVPTRELSQQVY+EV SL+E CRVQLKVVQL   M A+DLRA 
Sbjct: 85  FTANSDRK-KLAPNAFVLVPTRELSQQVYAEVKSLVELCRVQLKVVQLNSNMLANDLRAA 143

Query: 536 LAGRPDILVSTPACISTCMSTNALSTKSIQDSLSILVLDEADLLLSYGYEDDLKSLISHV 715
           LAG PDIL+STPAC++ C+S   L   SI  SL  LVLDEADLLLSYGYE+D+K+L  HV
Sbjct: 144 LAGPPDILISTPACVAKCLSCGVLQAASINASLETLVLDEADLLLSYGYENDIKALTPHV 203

Query: 716 PRRC 727
           PR C
Sbjct: 204 PRSC 207



 Score = 89.7 bits (221), Expect(2) = 3e-58
 Identities = 45/56 (80%), Positives = 49/56 (87%)
 Frame = +3

Query: 198 LGLDPRLIRSLTKKDISKPTPIQSIAIPLILEGKDVVARAKTGSGKTYAYLLPSLQ 365
           LG+D RL+R+L KK I KPTPIQ +AIPLILEGKDVVARAKTGSGKT AYLLP LQ
Sbjct: 27  LGVDARLLRALIKKRIEKPTPIQRVAIPLILEGKDVVARAKTGSGKTLAYLLPLLQ 82


>ref|NP_195217.1| DEAD-box ATP-dependent RNA helicase 16 [Arabidopsis thaliana]
           gi|75337761|sp|Q9SW44.1|RH16_ARATH RecName:
           Full=DEAD-box ATP-dependent RNA helicase 16
           gi|5123708|emb|CAB45452.1| RNA helicase (RH16)
           [Arabidopsis thaliana] gi|7270442|emb|CAB80208.1| RNA
           helicase (RH16) [Arabidopsis thaliana]
           gi|27754373|gb|AAO22635.1| putative DEAD/DEAH box RNA
           helicase protein [Arabidopsis thaliana]
           gi|28394057|gb|AAO42436.1| putative DEAD/DEAH box RNA
           helicase protein [Arabidopsis thaliana]
           gi|332661036|gb|AEE86436.1| DEAD-box ATP-dependent RNA
           helicase 16 [Arabidopsis thaliana]
          Length = 626

 Score =  161 bits (408), Expect(2) = 3e-57
 Identities = 81/124 (65%), Positives = 98/124 (79%)
 Frame = +2

Query: 356 FASNSSSTLKIAPSVFVLVPTRELSQQVYSEVLSLIESCRVQLKVVQLTGGMPASDLRAT 535
           F+++S S  K+APS F+LVP+REL QQVY+EV SLIE CRVQLK VQLT  M ASD+R  
Sbjct: 109 FSADSVSKKKLAPSAFILVPSRELCQQVYTEVSSLIELCRVQLKAVQLTSSMSASDMRNA 168

Query: 536 LAGRPDILVSTPACISTCMSTNALSTKSIQDSLSILVLDEADLLLSYGYEDDLKSLISHV 715
           LAG P+ILVSTPACI  C +   L   ++ +SLSILVLDEADLLLSYGYED+L+S+ S +
Sbjct: 169 LAGLPEILVSTPACIPKCFAAGVLEPTAVSESLSILVLDEADLLLSYGYEDNLRSVTSII 228

Query: 716 PRRC 727
           PRRC
Sbjct: 229 PRRC 232



 Score = 87.0 bits (214), Expect(2) = 3e-57
 Identities = 46/56 (82%), Positives = 47/56 (83%)
 Frame = +3

Query: 198 LGLDPRLIRSLTKKDISKPTPIQSIAIPLILEGKDVVARAKTGSGKTYAYLLPSLQ 365
           LGLD RLIR+LTKK I KPT IQ  AIP ILEGKDVVARAKTGSGKT AYLLP LQ
Sbjct: 51  LGLDSRLIRALTKKGIEKPTLIQQSAIPYILEGKDVVARAKTGSGKTLAYLLPLLQ 106


>ref|XP_002867100.1| hypothetical protein ARALYDRAFT_491167 [Arabidopsis lyrata subsp.
           lyrata] gi|297312936|gb|EFH43359.1| hypothetical protein
           ARALYDRAFT_491167 [Arabidopsis lyrata subsp. lyrata]
          Length = 634

 Score =  160 bits (405), Expect(2) = 6e-57
 Identities = 80/124 (64%), Positives = 97/124 (78%)
 Frame = +2

Query: 356 FASNSSSTLKIAPSVFVLVPTRELSQQVYSEVLSLIESCRVQLKVVQLTGGMPASDLRAT 535
           F+++S S  K+APS F+LVP+REL  QVYSEV SLIE CRVQLK VQLT  M ASD+R  
Sbjct: 111 FSADSGSKKKLAPSAFILVPSRELCHQVYSEVSSLIELCRVQLKAVQLTSSMSASDMRNA 170

Query: 536 LAGRPDILVSTPACISTCMSTNALSTKSIQDSLSILVLDEADLLLSYGYEDDLKSLISHV 715
           LAG P+ILVSTPACI  C +   L   ++ +SL+ILVLDEADLLLSYGYED+L+S+ S +
Sbjct: 171 LAGLPEILVSTPACIPKCFAAGVLEPTAVSESLAILVLDEADLLLSYGYEDNLRSVTSII 230

Query: 716 PRRC 727
           PRRC
Sbjct: 231 PRRC 234



 Score = 87.0 bits (214), Expect(2) = 6e-57
 Identities = 46/56 (82%), Positives = 47/56 (83%)
 Frame = +3

Query: 198 LGLDPRLIRSLTKKDISKPTPIQSIAIPLILEGKDVVARAKTGSGKTYAYLLPSLQ 365
           LGLD RLIR+LTKK I KPT IQ  AIP ILEGKDVVARAKTGSGKT AYLLP LQ
Sbjct: 53  LGLDSRLIRALTKKGIEKPTLIQQSAIPYILEGKDVVARAKTGSGKTLAYLLPLLQ 108