BLASTX nr result

ID: Coptis24_contig00027346 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027346
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525825.1| Minichromosome maintenance protein MCM, puta...   119   3e-25
emb|CBI37381.3| unnamed protein product [Vitis vinifera]              117   7e-25
ref|XP_002263738.1| PREDICTED: DNA replication licensing factor ...   117   7e-25
ref|XP_004155499.1| PREDICTED: DNA helicase MCM9-like [Cucumis s...   114   8e-24
ref|XP_004137058.1| PREDICTED: DNA helicase MCM9-like [Cucumis s...   114   8e-24

>ref|XP_002525825.1| Minichromosome maintenance protein MCM, putative [Ricinus communis]
           gi|223534830|gb|EEF36519.1| Minichromosome maintenance
           protein MCM, putative [Ricinus communis]
          Length = 644

 Score =  119 bits (298), Expect = 3e-25
 Identities = 60/114 (52%), Positives = 77/114 (67%)
 Frame = +1

Query: 22  DPVTAFARFLLTHQREHIHSLVLLKDPLLHCPIHIDFAELTEYNPFLAHHLFTNPTDFLP 201
           D V A A FL+ H    + S+VL  DP LH P+ I FAEL + NP L+H +F+ PT+FL 
Sbjct: 12  DQVKALAEFLIRHYSSQLRSIVLAADPKLHYPLFIHFAELMDENPLLSHLVFSQPTEFLR 71

Query: 202 LFDSAAINAQNIVLQDYNNIIGNACRKEFVHVRINISGSPLECPESFPGIGRVR 363
            FD AA+ A  IVL++  +       K+F+HVRIN+SGSPLECPE+FP IGRVR
Sbjct: 72  HFDKAALWAHKIVLKNL-DFGEKGIEKKFIHVRINVSGSPLECPETFPSIGRVR 124


>emb|CBI37381.3| unnamed protein product [Vitis vinifera]
          Length = 665

 Score =  117 bits (294), Expect = 7e-25
 Identities = 62/116 (53%), Positives = 78/116 (67%)
 Frame = +1

Query: 16  DTDPVTAFARFLLTHQREHIHSLVLLKDPLLHCPIHIDFAELTEYNPFLAHHLFTNPTDF 195
           D + + A A FLL H    + S++L +D LLH P+HI FAEL   +P  AH LF+ P  +
Sbjct: 8   DPESLKALAVFLLRHHSSDLRSIILARDSLLHYPLHIQFAELMNDDPPRAHLLFSQPLQY 67

Query: 196 LPLFDSAAINAQNIVLQDYNNIIGNACRKEFVHVRINISGSPLECPESFPGIGRVR 363
           L LFDSAA  AQ  +L+++  +  NA  KE VHVRINISGSPLE PE+FP IGRVR
Sbjct: 68  LRLFDSAAFLAQRAILEEFGWV--NASVKESVHVRINISGSPLEFPETFPSIGRVR 121


>ref|XP_002263738.1| PREDICTED: DNA replication licensing factor MCM9-like [Vitis
           vinifera]
          Length = 644

 Score =  117 bits (294), Expect = 7e-25
 Identities = 62/116 (53%), Positives = 78/116 (67%)
 Frame = +1

Query: 16  DTDPVTAFARFLLTHQREHIHSLVLLKDPLLHCPIHIDFAELTEYNPFLAHHLFTNPTDF 195
           D + + A A FLL H    + S++L +D LLH P+HI FAEL   +P  AH LF+ P  +
Sbjct: 8   DPESLKALAVFLLRHHSSDLRSIILARDSLLHYPLHIQFAELMNDDPPRAHLLFSQPLQY 67

Query: 196 LPLFDSAAINAQNIVLQDYNNIIGNACRKEFVHVRINISGSPLECPESFPGIGRVR 363
           L LFDSAA  AQ  +L+++  +  NA  KE VHVRINISGSPLE PE+FP IGRVR
Sbjct: 68  LRLFDSAAFLAQRAILEEFGWV--NASVKESVHVRINISGSPLEFPETFPSIGRVR 121


>ref|XP_004155499.1| PREDICTED: DNA helicase MCM9-like [Cucumis sativus]
          Length = 283

 Score =  114 bits (285), Expect = 8e-24
 Identities = 56/115 (48%), Positives = 78/115 (67%)
 Frame = +1

Query: 19  TDPVTAFARFLLTHQREHIHSLVLLKDPLLHCPIHIDFAELTEYNPFLAHHLFTNPTDFL 198
           T P+ AFA FL+ H  + + S+    DP LH P+ ++FAEL + +P LA  LF+ PTD+L
Sbjct: 13  TSPLKAFATFLIRHHSDQLRSIAHSPDPKLHYPLFVEFAELMDDDPPLARLLFSRPTDYL 72

Query: 199 PLFDSAAINAQNIVLQDYNNIIGNACRKEFVHVRINISGSPLECPESFPGIGRVR 363
            +FD AA+ A  I+L D    + N  +K+F+HVRIN++GSPLE PE+FP IG VR
Sbjct: 73  RVFDDAAVWAHMIILGDSKGSM-NGVKKDFIHVRINVTGSPLEFPETFPSIGSVR 126


>ref|XP_004137058.1| PREDICTED: DNA helicase MCM9-like [Cucumis sativus]
          Length = 649

 Score =  114 bits (285), Expect = 8e-24
 Identities = 56/115 (48%), Positives = 78/115 (67%)
 Frame = +1

Query: 19  TDPVTAFARFLLTHQREHIHSLVLLKDPLLHCPIHIDFAELTEYNPFLAHHLFTNPTDFL 198
           T P+ AFA FL+ H  + + S+    DP LH P+ ++FAEL + +P LA  LF+ PTD+L
Sbjct: 13  TSPLKAFATFLIRHHSDQLRSIAHSPDPKLHYPLFVEFAELMDDDPPLARLLFSRPTDYL 72

Query: 199 PLFDSAAINAQNIVLQDYNNIIGNACRKEFVHVRINISGSPLECPESFPGIGRVR 363
            +FD AA+ A  I+L D    + N  +K+F+HVRIN++GSPLE PE+FP IG VR
Sbjct: 73  RVFDDAAVWAHMIILGDSKGSM-NGVKKDFIHVRINVTGSPLEFPETFPSIGSVR 126


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