BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027337
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267239.2| PREDICTED: ATP-dependent DNA helicase DDM1-l...    84   9e-15
emb|CBI17533.3| unnamed protein product [Vitis vinifera]               84   9e-15
ref|XP_003516571.1| PREDICTED: ATP-dependent DNA helicase DDM1-l...    79   5e-13
ref|XP_003611980.1| Swi2/Snf2-related chromatin remodeling ATPas...    77   1e-12
ref|XP_002521606.1| ISWI chromatin remodeling complex ATPase ISW...    77   2e-12

>ref|XP_002267239.2| PREDICTED: ATP-dependent DNA helicase DDM1-like [Vitis vinifera]
          Length = 759

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 48/100 (48%), Positives = 62/100 (62%)
 Frame = +2

Query: 161 TEPAPVLSNNQFSKLEELLTQTQLYSQFLLEQMDEITIXXXXXXXXXXXXXXXXXXXXXX 340
           T+ AP L+++QF+KL+ELLTQTQLYS+FLLE+MD IT                       
Sbjct: 78  TQEAPHLNDSQFTKLDELLTQTQLYSEFLLEKMDSITF----NRVEEKESEIVEVKKRGR 133

Query: 341 XXXXXPQQNTRKAQKAVAAMLSRSEEGGKPEDSGLTEEEK 460
                 + N RKA++AVAAML+RS+EG  PED  LTEEE+
Sbjct: 134 GSKRKAEYNNRKAKRAVAAMLTRSKEGATPEDVNLTEEER 173


>emb|CBI17533.3| unnamed protein product [Vitis vinifera]
          Length = 800

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 48/100 (48%), Positives = 62/100 (62%)
 Frame = +2

Query: 161 TEPAPVLSNNQFSKLEELLTQTQLYSQFLLEQMDEITIXXXXXXXXXXXXXXXXXXXXXX 340
           T+ AP L+++QF+KL+ELLTQTQLYS+FLLE+MD IT                       
Sbjct: 78  TQEAPHLNDSQFTKLDELLTQTQLYSEFLLEKMDSITF----NRVEEKESEIVEVKKRGR 133

Query: 341 XXXXXPQQNTRKAQKAVAAMLSRSEEGGKPEDSGLTEEEK 460
                 + N RKA++AVAAML+RS+EG  PED  LTEEE+
Sbjct: 134 GSKRKAEYNNRKAKRAVAAMLTRSKEGATPEDVNLTEEER 173


>ref|XP_003516571.1| PREDICTED: ATP-dependent DNA helicase DDM1-like [Glycine max]
          Length = 943

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 47/99 (47%), Positives = 61/99 (61%)
 Frame = +2

Query: 164 EPAPVLSNNQFSKLEELLTQTQLYSQFLLEQMDEITIXXXXXXXXXXXXXXXXXXXXXXX 343
           E A  L++ QF+KL+ELLTQT+LYS+FLLE+MD+IT+                       
Sbjct: 262 EEAVDLNDIQFNKLDELLTQTRLYSEFLLEKMDDITL-----NREEQESNPSAKKGRGSK 316

Query: 344 XXXXPQQNTRKAQKAVAAMLSRSEEGGKPEDSGLTEEEK 460
                Q NTRKA+KAVAAML+RS+E  K ED  +TEEE+
Sbjct: 317 RKVASQYNTRKAKKAVAAMLTRSKESEKTEDMNMTEEER 355


>ref|XP_003611980.1| Swi2/Snf2-related chromatin remodeling ATPase [Medicago truncatula]
           gi|355513315|gb|AES94938.1| Swi2/Snf2-related chromatin
           remodeling ATPase [Medicago truncatula]
          Length = 750

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 47/103 (45%), Positives = 62/103 (60%), Gaps = 2/103 (1%)
 Frame = +2

Query: 158 KTEPAPVLSNNQFSKLEELLTQTQLYSQFLLEQMDEITI--XXXXXXXXXXXXXXXXXXX 331
           K E AP L+++QF+KL+ELLTQT+LYS+FLLE+MD+IT+                     
Sbjct: 65  KIEVAPNLNDSQFNKLDELLTQTKLYSEFLLEKMDDITMAAGEQEKPDEEESKPVAKKKG 124

Query: 332 XXXXXXXXPQQNTRKAQKAVAAMLSRSEEGGKPEDSGLTEEEK 460
                    Q NT KA+KAV AM++RS+E  K ED  LTEEE+
Sbjct: 125 RGSKRKAASQCNTGKAKKAVEAMITRSKENVKTEDVDLTEEER 167


>ref|XP_002521606.1| ISWI chromatin remodeling complex ATPase ISW1, putative [Ricinus
           communis] gi|223539284|gb|EEF40877.1| ISWI chromatin
           remodeling complex ATPase ISW1, putative [Ricinus
           communis]
          Length = 788

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 46/94 (48%), Positives = 58/94 (61%)
 Frame = +2

Query: 179 LSNNQFSKLEELLTQTQLYSQFLLEQMDEITIXXXXXXXXXXXXXXXXXXXXXXXXXXXP 358
           L++ QF+KL+ELLTQTQLYS+FLLE+MDEIT                             
Sbjct: 114 LNDAQFTKLDELLTQTQLYSEFLLEKMDEIT--RNGVEHETGTETAQKKRGRGSKRKAAA 171

Query: 359 QQNTRKAQKAVAAMLSRSEEGGKPEDSGLTEEEK 460
           + N+RKA +AVAAML+RSEE  K ED+ LTEEE+
Sbjct: 172 EYNSRKATRAVAAMLTRSEEVEKTEDANLTEEER 205