BLASTX nr result

ID: Coptis24_contig00027331 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027331
         (717 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79339.1| hypothetical protein VITISV_044312 [Vitis vinifera]   237   2e-60
emb|CAN71532.1| hypothetical protein VITISV_018180 [Vitis vinifera]   236   5e-60
emb|CAN79389.1| hypothetical protein VITISV_004909 [Vitis vinifera]   230   2e-58
ref|XP_004154771.1| PREDICTED: kanadaptin-like [Cucumis sativus]      205   7e-51
emb|CAN79736.1| hypothetical protein VITISV_021578 [Vitis vinifera]   201   2e-49

>emb|CAN79339.1| hypothetical protein VITISV_044312 [Vitis vinifera]
          Length = 354

 Score =  237 bits (605), Expect = 2e-60
 Identities = 119/225 (52%), Positives = 152/225 (67%), Gaps = 1/225 (0%)
 Frame = -3

Query: 715 LHGVPRSITSDRDVRFTSHFWQTLWRFLKCSLKFSTVFHPQTDGQTEVVNRSLGDLLRCI 536
           LHG+P+SI SDRDV+F S+FW+TLW  L   LKFS+ FHPQTDGQ EVVNRSLG+LLRCI
Sbjct: 27  LHGLPQSIVSDRDVKFMSYFWKTLWAKLGTQLKFSSSFHPQTDGQIEVVNRSLGNLLRCI 86

Query: 535 AGDEPKLWDFALSQAKFAFNNSVNCFTGQTPFQIVQGISPNMPVDLAPIPSALPVSVAGD 356
             D+ + WD  L QA+FAFN+S N  TG +PF++  G+ P   VDL P+P+++  S  GD
Sbjct: 87  VRDQLRNWDNVLPQAEFAFNSSTNRTTGYSPFEVAYGLKPKQLVDLIPLPTSVHTSQDGD 146

Query: 355 DFASHIKLIHDNVRQRLS*VYAKYKSSVDCHRRQVLFQVGDLVMVYLRKER-HVSKATKL 179
            F  HI+ IH+NVR+++      YK + D HRR + FQ GDLVMV LR ER H S   KL
Sbjct: 147 AFTRHIQDIHENVREKIKISNENYKEAADAHRRYIQFQEGDLVMVRLRPERFHPSTYQKL 206

Query: 178 QMRRFGPFPITACCGDNAYTLDLPSELRMHRTFNVSELSPFVGDH 44
           Q ++ GPF +    G+NAY L+LPS L     FNV +L  + G H
Sbjct: 207 QAKKAGPFQVLKRLGENAYLLELPSNLHFSPIFNVEDLYIYHGHH 251


>emb|CAN71532.1| hypothetical protein VITISV_018180 [Vitis vinifera]
          Length = 1323

 Score =  236 bits (601), Expect = 5e-60
 Identities = 119/225 (52%), Positives = 152/225 (67%), Gaps = 1/225 (0%)
 Frame = -3

Query: 715  LHGVPRSITSDRDVRFTSHFWQTLWRFLKCSLKFSTVFHPQTDGQTEVVNRSLGDLLRCI 536
            LHG+P+SI S+RDV+F S+FW+TLW  L   LKFS+ FHPQTDGQTEVVNRSLG+LLRCI
Sbjct: 995  LHGLPQSIVSNRDVKFMSYFWKTLWVKLGTQLKFSSSFHPQTDGQTEVVNRSLGNLLRCI 1054

Query: 535  AGDEPKLWDFALSQAKFAFNNSVNCFTGQTPFQIVQGISPNMPVDLAPIPSALPVSVAGD 356
              D+ + WD  L QA+FAFN+S N  TG  PF++  G+ P  PVDL P+P+++  S  GD
Sbjct: 1055 VRDQLRNWDNVLPQAEFAFNSSTNRTTGYLPFEVAYGLKPKQPVDLIPLPTSVRTSQDGD 1114

Query: 355  DFASHIKLIHDNVRQRLS*VYAKYKSSVDCHRRQVLFQVGDLVMVYLRKER-HVSKATKL 179
             FA HI+ IH+ VR+++      YK + D HRR + FQ G LVMV LR ER H S   KL
Sbjct: 1115 AFARHIRDIHEKVREKIKISNENYKEAXDAHRRYIQFQEGGLVMVRLRPERFHPSTYQKL 1174

Query: 178  QMRRFGPFPITACCGDNAYTLDLPSELRMHRTFNVSELSPFVGDH 44
            Q ++ GPF +    G+NAY L+LPS L     FNV +L  + G H
Sbjct: 1175 QAKKAGPFRVLKRLGENAYLLELPSNLXFSPIFNVKDLYIYHGHH 1219


>emb|CAN79389.1| hypothetical protein VITISV_004909 [Vitis vinifera]
          Length = 895

 Score =  230 bits (586), Expect = 2e-58
 Identities = 115/225 (51%), Positives = 148/225 (65%), Gaps = 1/225 (0%)
 Frame = -3

Query: 715  LHGVPRSITSDRDVRFTSHFWQTLWRFLKCSLKFSTVFHPQTDGQTEVVNRSLGDLLRCI 536
            LHG+P+SI   RDV F S+FW+TLW  L   LKFS+ FHPQTDGQTEVVNRSLG+LLRCI
Sbjct: 568  LHGLPQSIVFYRDVNFMSYFWKTLWAKLGAQLKFSSSFHPQTDGQTEVVNRSLGNLLRCI 627

Query: 535  AGDEPKLWDFALSQAKFAFNNSVNCFTGQTPFQIVQGISPNMPVDLAPIPSALPVSVAGD 356
              D+ + WD  L QA+FAFN+S N   G +PF++  G+ P  P+DL P+ +++  S  GD
Sbjct: 628  VRDQLRNWDNVLPQAEFAFNSSTNRTIGHSPFEVAYGLKPKQPIDLIPLSTSVRTSQDGD 687

Query: 355  DFASHIKLIHDNVRQRLS*VYAKYKSSVDCHRRQVLFQVGDLVMVYLRKER-HVSKATKL 179
             FA HI+ IH+ VR+++      YK + D HRR + FQ GDLVM  LR ER H S   KL
Sbjct: 688  AFARHIRDIHEKVREKIKISNENYKEAADAHRRYIQFQEGDLVMARLRPERFHPSTYQKL 747

Query: 178  QMRRFGPFPITACCGDNAYTLDLPSELRMHRTFNVSELSPFVGDH 44
            Q ++ GPF +    G+NAY L+LPS L     FNV +L  + G H
Sbjct: 748  QAKKAGPFRVLKWLGENAYLLELPSNLHFSPIFNVEDLYIYHGHH 792


>ref|XP_004154771.1| PREDICTED: kanadaptin-like [Cucumis sativus]
          Length = 962

 Score =  205 bits (522), Expect = 7e-51
 Identities = 101/220 (45%), Positives = 139/220 (63%), Gaps = 1/220 (0%)
 Frame = -3

Query: 712 HGVPRSITSDRDVRFTSHFWQTLWRFLKCSLKFSTVFHPQTDGQTEVVNRSLGDLLRCIA 533
           + V  +I SDRDV+F SHFW+TLW     +LK+ST  HPQTDGQTEV NR+LG+L+RC++
Sbjct: 187 NSVMLTIVSDRDVKFLSHFWKTLWSKFDTTLKYSTTAHPQTDGQTEVTNRTLGNLIRCLS 246

Query: 532 GDEPKLWDFALSQAKFAFNNSVNCFTGQTPFQIVQGISPNMPVDLAPIPSALPVSVAGDD 353
           G +PK WD AL+QA+FAFNN  N  TG+ PF++V    P +  DLA +P+ +  S   + 
Sbjct: 247 GSKPKQWDLALAQAEFAFNNMKNRSTGKCPFEVVYTKQPRLTFDLASLPTTIDTSSEAEK 306

Query: 352 FASHIKLIHDNVRQRLS*VYAKYKSSVDCHRRQVLFQVGDLVMVYLRKERH-VSKATKLQ 176
               I+ +H+ V   L      YK + D  RRQ  F  GDLVM++LRK R       KL+
Sbjct: 307 MVEKIQNLHEEVHNHLKESTQSYKKAADRKRRQATFTEGDLVMIHLRKIRFPTGTYNKLK 366

Query: 175 MRRFGPFPITACCGDNAYTLDLPSELRMHRTFNVSELSPF 56
            R+ GPF +    GDNAY ++LP +L +H  FNV++L  +
Sbjct: 367 DRQLGPFRVLEKIGDNAYRIELPLDLNVHPIFNVADLKQY 406


>emb|CAN79736.1| hypothetical protein VITISV_021578 [Vitis vinifera]
          Length = 649

 Score =  201 bits (510), Expect = 2e-49
 Identities = 101/209 (48%), Positives = 134/209 (64%), Gaps = 1/209 (0%)
 Frame = -3

Query: 664 SHFWQTLWRFLKCSLKFSTVFHPQTDGQTEVVNRSLGDLLRCIAGDEPKLWDFALSQAKF 485
           S+FW+TLW  L   L FS+ FHPQTDGQTEV+NRSLG+LLRCI  D+ + WD  L QA+F
Sbjct: 2   SYFWKTLWAKLGTQLNFSSSFHPQTDGQTEVINRSLGNLLRCIVRDQLRNWDNVLPQAEF 61

Query: 484 AFNNSVNCFTGQTPFQIVQGISPNMPVDLAPIPSALPVSVAGDDFASHIKLIHDNVRQRL 305
           AFN+  N  TG +PF++  G+ P  PVDL P+P+++  S  GD FA HI+ IH  VR+++
Sbjct: 62  AFNSFTNXTTGXSPFEVAYGLKPKQPVDLIPLPTSVRTSQDGDAFARHIRDIHKKVREKI 121

Query: 304 S*VYAKYKSSVDCHRRQVLFQVGDLVMVYLRKER-HVSKATKLQMRRFGPFPITACCGDN 128
                 YK + D H+  + FQ GDLVMV L+ ER H S    LQ ++ GPF +    G+N
Sbjct: 122 KISNENYKEAADAHQIYIQFQEGDLVMVRLQPERFHSSTYQXLQAKKAGPFWVLKRLGEN 181

Query: 127 AYTLDLPSELRMHRTFNVSELSPFVGDHV 41
           AY LDL  +L     FNV +L  + G H+
Sbjct: 182 AYLLDLSLDLHFSPIFNVEDLYIYHGHHI 210


Top