BLASTX nr result

ID: Coptis24_contig00027330 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027330
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002440160.1| hypothetical protein SORBIDRAFT_09g027033 [S...   116   2e-24
ref|XP_002453528.1| hypothetical protein SORBIDRAFT_04g007410 [S...   110   9e-23
ref|XP_002461954.1| hypothetical protein SORBIDRAFT_02g011140 [S...   110   9e-23
ref|XP_002468514.1| hypothetical protein SORBIDRAFT_01g047190 [S...   110   9e-23
ref|XP_002450403.1| hypothetical protein SORBIDRAFT_05g004780 [S...   110   1e-22

>ref|XP_002440160.1| hypothetical protein SORBIDRAFT_09g027033 [Sorghum bicolor]
           gi|241945445|gb|EES18590.1| hypothetical protein
           SORBIDRAFT_09g027033 [Sorghum bicolor]
          Length = 208

 Score =  116 bits (291), Expect = 2e-24
 Identities = 56/112 (50%), Positives = 77/112 (68%), Gaps = 2/112 (1%)
 Frame = +2

Query: 5   IDEEDDEVA--SRKKPHTLGPMDKFASAITPDSSIDARKKMRQQNINDALWKERPHSVHQ 178
           + EE +EV      +PH LGPMDK+  AI P ++    + ++QQ +N  LWKER H VH+
Sbjct: 42  VGEESEEVTCVGSSEPHKLGPMDKWTKAIDPKAT--RSESLQQQRLNKELWKERTHEVHK 99

Query: 179 YLSRWVYENGIAFHAINDDSFKRFVEAVGQFGLGYLPPGQYQLREPLLKEEY 334
           Y++RWVY +GI+F+A ++D FK+  EA+GQFG G  PP Q  LRE LL+EEY
Sbjct: 100 YIARWVYTHGISFNACDNDEFKQMCEAIGQFGPGLEPPCQDSLREKLLEEEY 151


>ref|XP_002453528.1| hypothetical protein SORBIDRAFT_04g007410 [Sorghum bicolor]
           gi|241933359|gb|EES06504.1| hypothetical protein
           SORBIDRAFT_04g007410 [Sorghum bicolor]
          Length = 708

 Score =  110 bits (276), Expect = 9e-23
 Identities = 52/112 (46%), Positives = 76/112 (67%), Gaps = 2/112 (1%)
 Frame = +2

Query: 5   IDEEDDEVA--SRKKPHTLGPMDKFASAITPDSSIDARKKMRQQNINDALWKERPHSVHQ 178
           +  E +EV      +PH LGP+DK+  AI P ++    + ++QQ +N  LWKER H VH+
Sbjct: 63  VGSESEEVTCVGSSEPHKLGPIDKWTKAIDPKAT--KSESLQQQRLNKELWKERTHEVHK 120

Query: 179 YLSRWVYENGIAFHAINDDSFKRFVEAVGQFGLGYLPPGQYQLREPLLKEEY 334
           +++RWVY +GI+F++ ++D FK+  EA+GQFG G  PP Q  LRE LL+EEY
Sbjct: 121 FIARWVYTHGISFNSCDNDEFKQMCEAIGQFGPGLEPPTQDSLREKLLEEEY 172


>ref|XP_002461954.1| hypothetical protein SORBIDRAFT_02g011140 [Sorghum bicolor]
           gi|241925331|gb|EER98475.1| hypothetical protein
           SORBIDRAFT_02g011140 [Sorghum bicolor]
          Length = 759

 Score =  110 bits (276), Expect = 9e-23
 Identities = 52/112 (46%), Positives = 76/112 (67%), Gaps = 2/112 (1%)
 Frame = +2

Query: 5   IDEEDDEVA--SRKKPHTLGPMDKFASAITPDSSIDARKKMRQQNINDALWKERPHSVHQ 178
           +  E +EV      +PH LGP+DK+  AI P ++    + ++QQ +N  LWKER H VH+
Sbjct: 114 VGSESEEVTCVGSSEPHKLGPIDKWTKAIDPKAT--KSESLQQQRLNKELWKERTHEVHK 171

Query: 179 YLSRWVYENGIAFHAINDDSFKRFVEAVGQFGLGYLPPGQYQLREPLLKEEY 334
           +++RWVY +GI+F++ ++D FK+  EA+GQFG G  PP Q  LRE LL+EEY
Sbjct: 172 FIARWVYTHGISFNSCDNDEFKQMCEAIGQFGPGLEPPTQDSLREKLLEEEY 223


>ref|XP_002468514.1| hypothetical protein SORBIDRAFT_01g047190 [Sorghum bicolor]
           gi|241922368|gb|EER95512.1| hypothetical protein
           SORBIDRAFT_01g047190 [Sorghum bicolor]
          Length = 759

 Score =  110 bits (276), Expect = 9e-23
 Identities = 52/112 (46%), Positives = 76/112 (67%), Gaps = 2/112 (1%)
 Frame = +2

Query: 5   IDEEDDEVA--SRKKPHTLGPMDKFASAITPDSSIDARKKMRQQNINDALWKERPHSVHQ 178
           +  E +EV      +PH LGP+DK+  AI P ++    + ++QQ +N  LWKER H VH+
Sbjct: 114 VGSESEEVTCVGSSEPHKLGPIDKWTKAIDPKAT--KSESLQQQRLNKELWKERTHEVHK 171

Query: 179 YLSRWVYENGIAFHAINDDSFKRFVEAVGQFGLGYLPPGQYQLREPLLKEEY 334
           +++RWVY +GI+F++ ++D FK+  EA+GQFG G  PP Q  LRE LL+EEY
Sbjct: 172 FIARWVYTHGISFNSCDNDEFKQMCEAIGQFGPGLEPPTQDSLREKLLEEEY 223


>ref|XP_002450403.1| hypothetical protein SORBIDRAFT_05g004780 [Sorghum bicolor]
           gi|241936246|gb|EES09391.1| hypothetical protein
           SORBIDRAFT_05g004780 [Sorghum bicolor]
          Length = 801

 Score =  110 bits (275), Expect = 1e-22
 Identities = 49/110 (44%), Positives = 75/110 (68%)
 Frame = +2

Query: 8   DEEDDEVASRKKPHTLGPMDKFASAITPDSSIDARKKMRQQNINDALWKERPHSVHQYLS 187
           D ++       +PH LGP+DK+  AI P +++     ++QQ +N  LWKER + VH+Y++
Sbjct: 227 DSDEVTCVGSSEPHKLGPIDKWTRAIDPKATMS--DSLKQQQLNKELWKERTNEVHKYIA 284

Query: 188 RWVYENGIAFHAINDDSFKRFVEAVGQFGLGYLPPGQYQLREPLLKEEYE 337
           +W Y + IAF+A+++D FK+  EA+GQFG G++PP Q  LR  LL+EEYE
Sbjct: 285 KWAYTHAIAFNALDNDEFKQMCEAIGQFGPGFVPPTQDALRGKLLEEEYE 334


Top