BLASTX nr result

ID: Coptis24_contig00027318 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027318
         (671 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN70801.1| hypothetical protein VITISV_008053 [Vitis vinifera]   213   2e-53
emb|CBI36602.3| unnamed protein product [Vitis vinifera]              212   5e-53
ref|XP_002271446.1| PREDICTED: GPI mannosyltransferase 3 [Vitis ...   212   5e-53
ref|XP_003542300.1| PREDICTED: GPI mannosyltransferase 3-like [G...   202   6e-50
ref|XP_002513232.1| glycosyltransferase, putative [Ricinus commu...   199   5e-49

>emb|CAN70801.1| hypothetical protein VITISV_008053 [Vitis vinifera]
          Length = 499

 Score =  213 bits (543), Expect = 2e-53
 Identities = 108/164 (65%), Positives = 119/164 (72%), Gaps = 1/164 (0%)
 Frame = +3

Query: 3   VMVLALTSLLDRWMYKSWTFVPLNFLRFNFLSSGGDYYGTHKWHWYFTQGFTVMLFTFLP 182
           V+VLAL  L+DR MY SW  VPLNFL+FNFLSSGGDYYGTHKWHWYFTQGF VM+FTFLP
Sbjct: 207 VLVLALMCLVDRLMYGSWILVPLNFLKFNFLSSGGDYYGTHKWHWYFTQGFPVMVFTFLP 266

Query: 183 FSISGIFQSKQWKLFGLMAWVLGLYSVLGHKEFRFVLPVLPIALMF-XXXXXXXXXXXXX 359
           FSI+G+  SKQWK  GL+AWVLGLYSVLGHKEFRFVLPVLPIALMF              
Sbjct: 267 FSIAGMVLSKQWKPSGLIAWVLGLYSVLGHKEFRFVLPVLPIALMFSGYSIAAMKTADSS 326

Query: 360 XXXXXXXXXXXXXXXXXMQLALFFLLMTNLPMALYMNLVHQVGT 491
                            +QLA+FFLL TN+PMALYM+L HQ GT
Sbjct: 327 NSKRKGSSNSHVKCPSKVQLAIFFLLSTNIPMALYMSLFHQRGT 370


>emb|CBI36602.3| unnamed protein product [Vitis vinifera]
          Length = 626

 Score =  212 bits (540), Expect = 5e-53
 Identities = 107/164 (65%), Positives = 119/164 (72%), Gaps = 1/164 (0%)
 Frame = +3

Query: 3   VMVLALTSLLDRWMYKSWTFVPLNFLRFNFLSSGGDYYGTHKWHWYFTQGFTVMLFTFLP 182
           V+VLAL  L+DR MY SW  VPLNFL+FNFLSSGGDYYGTHKWHWYFTQGF VMLFTFLP
Sbjct: 334 VLVLALMCLVDRLMYGSWILVPLNFLKFNFLSSGGDYYGTHKWHWYFTQGFPVMLFTFLP 393

Query: 183 FSISGIFQSKQWKLFGLMAWVLGLYSVLGHKEFRFVLPVLPIALMF-XXXXXXXXXXXXX 359
           FSI+G+  SKQWK  GL+AWVLGLYSVLGHKEFRFVLPVLP+ALMF              
Sbjct: 394 FSIAGMVLSKQWKPSGLIAWVLGLYSVLGHKEFRFVLPVLPLALMFSGYSIAAMKTADSS 453

Query: 360 XXXXXXXXXXXXXXXXXMQLALFFLLMTNLPMALYMNLVHQVGT 491
                            ++LA+FFLL TN+PMALYM+L HQ GT
Sbjct: 454 NSKRKGSSNSHVKCPSKVRLAIFFLLSTNIPMALYMSLFHQRGT 497


>ref|XP_002271446.1| PREDICTED: GPI mannosyltransferase 3 [Vitis vinifera]
          Length = 541

 Score =  212 bits (540), Expect = 5e-53
 Identities = 107/164 (65%), Positives = 119/164 (72%), Gaps = 1/164 (0%)
 Frame = +3

Query: 3   VMVLALTSLLDRWMYKSWTFVPLNFLRFNFLSSGGDYYGTHKWHWYFTQGFTVMLFTFLP 182
           V+VLAL  L+DR MY SW  VPLNFL+FNFLSSGGDYYGTHKWHWYFTQGF VMLFTFLP
Sbjct: 249 VLVLALMCLVDRLMYGSWILVPLNFLKFNFLSSGGDYYGTHKWHWYFTQGFPVMLFTFLP 308

Query: 183 FSISGIFQSKQWKLFGLMAWVLGLYSVLGHKEFRFVLPVLPIALMF-XXXXXXXXXXXXX 359
           FSI+G+  SKQWK  GL+AWVLGLYSVLGHKEFRFVLPVLP+ALMF              
Sbjct: 309 FSIAGMVLSKQWKPSGLIAWVLGLYSVLGHKEFRFVLPVLPLALMFSGYSIAAMKTADSS 368

Query: 360 XXXXXXXXXXXXXXXXXMQLALFFLLMTNLPMALYMNLVHQVGT 491
                            ++LA+FFLL TN+PMALYM+L HQ GT
Sbjct: 369 NSKRKGSSNSHVKCPSKVRLAIFFLLSTNIPMALYMSLFHQRGT 412


>ref|XP_003542300.1| PREDICTED: GPI mannosyltransferase 3-like [Glycine max]
          Length = 542

 Score =  202 bits (513), Expect = 6e-50
 Identities = 99/163 (60%), Positives = 113/163 (69%), Gaps = 1/163 (0%)
 Frame = +3

Query: 3   VMVLALTSLLDRWMYKSWTFVPLNFLRFNFLSSGGDYYGTHKWHWYFTQGFTVMLFTFLP 182
           ++VL LT LLDR+MY +W  VPLNFL+FNFLS+GGDYYGTHKWHWYFTQGF VM+F+ LP
Sbjct: 251 ILVLGLTCLLDRFMYGTWILVPLNFLKFNFLSAGGDYYGTHKWHWYFTQGFPVMIFSHLP 310

Query: 183 FSISGIFQSKQWKLFGLMAWVLGLYSVLGHKEFRFVLPVLPIALMF-XXXXXXXXXXXXX 359
           F I+GI  SKQWK  GL+AWVLG YS+LGHKEFRF LPVLPIALMF              
Sbjct: 311 FCIAGIIYSKQWKFSGLLAWVLGFYSLLGHKEFRFALPVLPIALMFSGYSLAVIEDPGYA 370

Query: 360 XXXXXXXXXXXXXXXXXMQLALFFLLMTNLPMALYMNLVHQVG 488
                            M  A+ FLL TN+PMALYM+LVHQ G
Sbjct: 371 QNKGKKSIKKHTRFPPNMGAAILFLLATNIPMALYMSLVHQRG 413


>ref|XP_002513232.1| glycosyltransferase, putative [Ricinus communis]
           gi|223547606|gb|EEF49100.1| glycosyltransferase,
           putative [Ricinus communis]
          Length = 537

 Score =  199 bits (505), Expect = 5e-49
 Identities = 101/163 (61%), Positives = 113/163 (69%), Gaps = 1/163 (0%)
 Frame = +3

Query: 6   MVLALTSLLDRWMYKSWTFVPLNFLRFNFLSSGGDYYGTHKWHWYFTQGFTVMLFTFLPF 185
           +VL L+  LDR MY SW  VPLNFL+FNFLSSGGDYYGTHKWHWYF+QGF+VMLFTFLPF
Sbjct: 247 LVLGLSCFLDRLMYGSWIIVPLNFLKFNFLSSGGDYYGTHKWHWYFSQGFSVMLFTFLPF 306

Query: 186 SISGIFQSKQWKLFGLMAWVLGLYSVLGHKEFRFVLPVLPIALMF-XXXXXXXXXXXXXX 362
           SI+G  +SK WK  GL+AWVL LYSVLGHKEFRFVLPVLPIALMF               
Sbjct: 307 SIAGSIKSKCWKFSGLIAWVLILYSVLGHKEFRFVLPVLPIALMFSGYALAVMARPDSPD 366

Query: 363 XXXXXXXXXXXXXXXXMQLALFFLLMTNLPMALYMNLVHQVGT 491
                           +  A+ FLL TN+PMA YM+LVHQ GT
Sbjct: 367 GKRKGSSTGQTRLLSRVGFAVVFLLATNIPMAFYMSLVHQRGT 409


Top