BLASTX nr result

ID: Coptis24_contig00027307 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027307
         (207 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284699.1| PREDICTED: uncharacterized protein LOC100259...    64   2e-08

>ref|XP_002284699.1| PREDICTED: uncharacterized protein LOC100259528 [Vitis vinifera]
          Length = 218

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 34/68 (50%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
 Frame = -3

Query: 202 LSTTGNVGLQRPXXXXXXXXXXXXXXXXXXXIPPQKHKL-ATAPKIYMRTTSKQAYICRD 26
           L+ TGNVGL+RP                    P Q   L +TAPKI MR  SKQAYICRD
Sbjct: 73  LAPTGNVGLRRPMDRFALRSSFFSPSIHLLLPPNQHRALPSTAPKISMRVASKQAYICRD 132

Query: 25  CGYIYSDK 2
           CGYIY+D+
Sbjct: 133 CGYIYNDR 140


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