BLASTX nr result

ID: Coptis24_contig00027303 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027303
         (729 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65860.1| hypothetical protein VITISV_014849 [Vitis vinifera]   285   5e-75
ref|XP_004144400.1| PREDICTED: beta-amylase 1, chloroplastic-lik...   285   7e-75
ref|XP_002263816.2| PREDICTED: beta-amylase 1, chloroplastic-lik...   284   1e-74
ref|XP_002304568.1| predicted protein [Populus trichocarpa] gi|2...   276   4e-72
ref|XP_002297961.1| predicted protein [Populus trichocarpa] gi|2...   273   3e-71

>emb|CAN65860.1| hypothetical protein VITISV_014849 [Vitis vinifera]
          Length = 542

 Score =  285 bits (730), Expect = 5e-75
 Identities = 143/229 (62%), Positives = 166/229 (72%), Gaps = 8/229 (3%)
 Frame = -1

Query: 663 NMNFQYQ-------EEKKGSLVYVTLPIDAVDSLGKVKRVKAMSYSFKALALAXXXXXXX 505
           N +FQY+       +  KGS V+VTLP+D V S G+V+R K M  SF+A+A A       
Sbjct: 67  NGDFQYELQHGFSAQRSKGSPVFVTLPVDVVSSSGEVRRWKTMVQSFRAIAAAGVEGVVM 126

Query: 504 XXXXXXXERDAPLSYDWRSYLEIVALAKHFGLKVRPVMAFHSFGV-PGDSCWIPLPHWVR 328
                  ER+ P  Y+W+ Y+EIVALA+  GLKVR VMAFH  G  PGD  WIPLP WV 
Sbjct: 127 EVWWGLVEREEPRVYNWQGYMEIVALARRXGLKVRVVMAFHQCGTGPGDPSWIPLPQWVL 186

Query: 327 QVMIEQPDLAFSDRFGRRNGEYISLGCDVLPVLKGRSPMQAYSDFMRSFRDTFQEHLGIT 148
           + M   PDLAFSDRFG RN EYISLGCD+LPVL+GRSP+Q Y DFMR+FRDTF+  LG+T
Sbjct: 187 EEMDRDPDLAFSDRFGTRNXEYISLGCDILPVLRGRSPIQTYXDFMRNFRDTFKPFLGLT 246

Query: 147 VTGIQVGMGPAGELRYPSCPSQKLAWSWRFRELGEFQCYDKYMLASLNA 1
           +T IQVGMGPAGELRYPSCPS KL W+WR  ELGEFQCYDKYMLASLNA
Sbjct: 247 ITVIQVGMGPAGELRYPSCPSHKLTWAWRSYELGEFQCYDKYMLASLNA 295


>ref|XP_004144400.1| PREDICTED: beta-amylase 1, chloroplastic-like [Cucumis sativus]
          Length = 546

 Score =  285 bits (729), Expect = 7e-75
 Identities = 139/216 (64%), Positives = 166/216 (76%), Gaps = 1/216 (0%)
 Frame = -1

Query: 645 QEEKKGSLVYVTLPIDAVDSLGKVKRVKAMSYSFKALALAXXXXXXXXXXXXXXERDAPL 466
           +  K GS V+VTLP+DAV   G+++R KAMS SF+ALA A              E D P 
Sbjct: 76  ERRKTGSAVFVTLPLDAVSPDGQLRRKKAMSQSFRALAAAGVEGVVIELWWGLVETDVPC 135

Query: 465 SYDWRSYLEIVALAKHFGLKVRPVMAFHSFGV-PGDSCWIPLPHWVRQVMIEQPDLAFSD 289
           +Y+W+ YLEIVA+A+ FGLKVR V  F+  G+ P D  WIPLP WV + + + PDLA+SD
Sbjct: 136 NYNWKGYLEIVAMARRFGLKVRAVFTFNQHGLGPDDPHWIPLPKWVLEEINKDPDLAYSD 195

Query: 288 RFGRRNGEYISLGCDVLPVLKGRSPMQAYSDFMRSFRDTFQEHLGITVTGIQVGMGPAGE 109
           RFGRRN EYI+LGCD LPVL+GRSP+QAY+DFMR+FRDTF+ +LG  +TGIQVGMGPAGE
Sbjct: 196 RFGRRNSEYITLGCDTLPVLRGRSPIQAYADFMRNFRDTFRPYLGAIITGIQVGMGPAGE 255

Query: 108 LRYPSCPSQKLAWSWRFRELGEFQCYDKYMLASLNA 1
           LRYPS PSQKLAW+WR RELGEFQCYDKYMLASLNA
Sbjct: 256 LRYPSSPSQKLAWAWRSRELGEFQCYDKYMLASLNA 291


>ref|XP_002263816.2| PREDICTED: beta-amylase 1, chloroplastic-like [Vitis vinifera]
          Length = 584

 Score =  284 bits (726), Expect = 1e-74
 Identities = 143/229 (62%), Positives = 166/229 (72%), Gaps = 8/229 (3%)
 Frame = -1

Query: 663 NMNFQYQ-------EEKKGSLVYVTLPIDAVDSLGKVKRVKAMSYSFKALALAXXXXXXX 505
           N +FQY+       +  KGS V+VTLP+D V S G+V+R K M  SF+A+A A       
Sbjct: 109 NGDFQYELQHGFSAQRSKGSPVFVTLPVDVVSSSGEVRRWKTMVQSFRAIAAAGVEGVVM 168

Query: 504 XXXXXXXERDAPLSYDWRSYLEIVALAKHFGLKVRPVMAFHSFGV-PGDSCWIPLPHWVR 328
                  ER+ P  Y+W+ Y+EIVALA+  GLKVR VMAFH  G  PGD  WIPLP WV 
Sbjct: 169 EVWWGLVEREEPRVYNWQGYMEIVALARRCGLKVRVVMAFHQCGTGPGDPSWIPLPQWVL 228

Query: 327 QVMIEQPDLAFSDRFGRRNGEYISLGCDVLPVLKGRSPMQAYSDFMRSFRDTFQEHLGIT 148
           + M   PDLAFSDRFG RN EYISLGCD+LPVL+GRSP+Q Y DFMR+FRDTF+  LG+T
Sbjct: 229 EEMDRDPDLAFSDRFGTRNMEYISLGCDILPVLRGRSPIQTYVDFMRNFRDTFKPFLGLT 288

Query: 147 VTGIQVGMGPAGELRYPSCPSQKLAWSWRFRELGEFQCYDKYMLASLNA 1
           +T IQVGMGPAGELRYPSCPS KL W+WR  ELGEFQCYDKYMLASLNA
Sbjct: 289 ITVIQVGMGPAGELRYPSCPSHKLTWAWRSYELGEFQCYDKYMLASLNA 337


>ref|XP_002304568.1| predicted protein [Populus trichocarpa] gi|222842000|gb|EEE79547.1|
           predicted protein [Populus trichocarpa]
          Length = 437

 Score =  276 bits (705), Expect = 4e-72
 Identities = 134/213 (62%), Positives = 160/213 (75%), Gaps = 1/213 (0%)
 Frame = -1

Query: 636 KKGSLVYVTLPIDAVDSLGKVKRVKAMSYSFKALALAXXXXXXXXXXXXXXERDAPLSYD 457
           KKGS VYV LP D+V   GKV+R+K ++ S +AL  A              ER+ P+ Y+
Sbjct: 2   KKGSPVYVMLPADSVAKDGKVRRIKVLTASLRALVTAGVEGVVMEVWWGVVEREKPMVYN 61

Query: 456 WRSYLEIVALAKHFGLKVRPVMAFHSFGV-PGDSCWIPLPHWVRQVMIEQPDLAFSDRFG 280
           W  Y ++VALA+  GLKVR V+AFH  G+ PGD  WI LP WV + M + PD+A+SDRFG
Sbjct: 62  WGGYSDLVALARRCGLKVRAVLAFHQHGIGPGDPLWISLPQWVLEEMDKDPDIAYSDRFG 121

Query: 279 RRNGEYISLGCDVLPVLKGRSPMQAYSDFMRSFRDTFQEHLGITVTGIQVGMGPAGELRY 100
           RRN EYISLGCD+ PVLKGRSP+QAYSDFM +FRDTF+  LG  +TG+QVGMGPAGELRY
Sbjct: 122 RRNMEYISLGCDMFPVLKGRSPLQAYSDFMMNFRDTFRPLLGSVITGVQVGMGPAGELRY 181

Query: 99  PSCPSQKLAWSWRFRELGEFQCYDKYMLASLNA 1
           PSCPSQ+LAW+WR RELGEFQCYDKYMLA LNA
Sbjct: 182 PSCPSQELAWAWRSRELGEFQCYDKYMLACLNA 214


>ref|XP_002297961.1| predicted protein [Populus trichocarpa] gi|222845219|gb|EEE82766.1|
           predicted protein [Populus trichocarpa]
          Length = 555

 Score =  273 bits (698), Expect = 3e-71
 Identities = 130/216 (60%), Positives = 161/216 (74%), Gaps = 1/216 (0%)
 Frame = -1

Query: 645 QEEKKGSLVYVTLPIDAVDSLGKVKRVKAMSYSFKALALAXXXXXXXXXXXXXXERDAPL 466
           +  ++GS VYVTLP + V   GKV+R+K ++ S +AL  A              ER+ P 
Sbjct: 84  ERRRRGSPVYVTLPAELVAEDGKVRRIKVLTASLRALVTAGVEGVVMEIWWGIVEREKPR 143

Query: 465 SYDWRSYLEIVALAKHFGLKVRPVMAFHSFGV-PGDSCWIPLPHWVRQVMIEQPDLAFSD 289
            Y+W  YL++VALA+  GLKVR V+AFH  G  PGD  W+ LP WV + + + PD+A++D
Sbjct: 144 VYNWGGYLDLVALARRCGLKVRAVLAFHQRGTGPGDPLWVSLPQWVLEEIDKDPDIAYTD 203

Query: 288 RFGRRNGEYISLGCDVLPVLKGRSPMQAYSDFMRSFRDTFQEHLGITVTGIQVGMGPAGE 109
           RFGRRN EYISLGCD+ PVLKGRSP+QAYSDFM +FRDTF+  LG+ +TG+QVGMGPAGE
Sbjct: 204 RFGRRNMEYISLGCDMFPVLKGRSPLQAYSDFMMNFRDTFRSLLGVVITGVQVGMGPAGE 263

Query: 108 LRYPSCPSQKLAWSWRFRELGEFQCYDKYMLASLNA 1
           LRYPSCPSQKLAW+W  RELGEFQCYDKYM+ASLNA
Sbjct: 264 LRYPSCPSQKLAWAWHTRELGEFQCYDKYMIASLNA 299


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