BLASTX nr result

ID: Coptis24_contig00027300 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027300
         (630 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551620.1| PREDICTED: 4-hydroxybenzoate polyprenyltrans...    62   1e-07
sp|Q8W405.1|PGT1_LITER RecName: Full=4-hydroxybenzoate geranyltr...    59   6e-07
gb|AFK48801.1| unknown [Medicago truncatula]                           59   6e-07
ref|XP_003623641.1| Para-hydroxybenzoate-polyprenyltransferase [...    59   6e-07
sp|Q8W404.1|PGT2_LITER RecName: Full=4-hydroxybenzoate geranyltr...    59   6e-07

>ref|XP_003551620.1| PREDICTED: 4-hydroxybenzoate polyprenyltransferase,
           mitochondrial-like [Glycine max]
          Length = 466

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 28/50 (56%), Positives = 35/50 (70%)
 Frame = -1

Query: 150 SSGANNGGKQHDVNKGSNIQHSWIDLYLPDSVRPYAQLARLDKPIGTWLL 1
           S+  +   K H    G N+  SW++LYLP  V+PYA+LARLDKPIGTWLL
Sbjct: 77  STWPSKENKNHQ--SGGNVSSSWVELYLPRKVQPYARLARLDKPIGTWLL 124


>sp|Q8W405.1|PGT1_LITER RecName: Full=4-hydroxybenzoate geranyltransferase 1; AltName:
           Full=PHB geranyltransferase 1; Short=LePGT1
           gi|18389306|dbj|BAB84122.1| PGT-1 [Lithospermum
           erythrorhizon]
          Length = 307

 Score = 59.3 bits (142), Expect = 6e-07
 Identities = 28/42 (66%), Positives = 32/42 (76%)
 Frame = -1

Query: 126 KQHDVNKGSNIQHSWIDLYLPDSVRPYAQLARLDKPIGTWLL 1
           KQ  + KG   Q SWI++YLP  VRPYA LARLDKPIG+WLL
Sbjct: 5   KQTQLKKGK--QPSWIEMYLPKEVRPYAHLARLDKPIGSWLL 44


>gb|AFK48801.1| unknown [Medicago truncatula]
          Length = 400

 Score = 59.3 bits (142), Expect = 6e-07
 Identities = 28/46 (60%), Positives = 34/46 (73%)
 Frame = -1

Query: 138 NNGGKQHDVNKGSNIQHSWIDLYLPDSVRPYAQLARLDKPIGTWLL 1
           N      +V+ G +I  SW+DLYLP  V+PYA+LARLDKPIGTWLL
Sbjct: 92  NKNQSSSNVSSGGDI--SWVDLYLPRLVQPYARLARLDKPIGTWLL 135


>ref|XP_003623641.1| Para-hydroxybenzoate-polyprenyltransferase [Medicago truncatula]
           gi|355498656|gb|AES79859.1|
           Para-hydroxybenzoate-polyprenyltransferase [Medicago
           truncatula]
          Length = 400

 Score = 59.3 bits (142), Expect = 6e-07
 Identities = 28/46 (60%), Positives = 34/46 (73%)
 Frame = -1

Query: 138 NNGGKQHDVNKGSNIQHSWIDLYLPDSVRPYAQLARLDKPIGTWLL 1
           N      +V+ G +I  SW+DLYLP  V+PYA+LARLDKPIGTWLL
Sbjct: 92  NKNQSSSNVSSGGDI--SWVDLYLPRLVQPYARLARLDKPIGTWLL 135


>sp|Q8W404.1|PGT2_LITER RecName: Full=4-hydroxybenzoate geranyltransferase 2; AltName:
           Full=PHB geranyltransferase 2.; Short=LePGT2
           gi|18389308|dbj|BAB84123.1| PGT-2 [Lithospermum
           erythrorhizon]
          Length = 306

 Score = 59.3 bits (142), Expect = 6e-07
 Identities = 28/42 (66%), Positives = 32/42 (76%)
 Frame = -1

Query: 126 KQHDVNKGSNIQHSWIDLYLPDSVRPYAQLARLDKPIGTWLL 1
           KQ  + KG   Q SWI++YLP  VRPYA LARLDKPIG+WLL
Sbjct: 4   KQTQLKKGK--QPSWIEIYLPKEVRPYAHLARLDKPIGSWLL 43


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