BLASTX nr result

ID: Coptis24_contig00027297 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027297
         (920 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17374.3| unnamed protein product [Vitis vinifera]              201   2e-49
ref|XP_002265960.1| PREDICTED: transcription factor bHLH121-like...   201   2e-49
emb|CAN69588.1| hypothetical protein VITISV_019798 [Vitis vinifera]   197   4e-48
ref|XP_004158905.1| PREDICTED: transcription factor bHLH121-like...   194   2e-47
ref|XP_004134862.1| PREDICTED: transcription factor bHLH121-like...   194   2e-47

>emb|CBI17374.3| unnamed protein product [Vitis vinifera]
          Length = 326

 Score =  201 bits (512), Expect = 2e-49
 Identities = 103/177 (58%), Positives = 124/177 (70%)
 Frame = -2

Query: 919 EYATLSEESRELTQEKNELREEKASIKSDIDNLNVQYQQRIRVMFPWSGMDPAVMMGXXX 740
           E A LSEESREL QEKNELREEK ++KSDIDNLNVQYQQR+RVMFPW+ +DP+V+MG   
Sbjct: 109 ECAALSEESRELVQEKNELREEKVALKSDIDNLNVQYQQRLRVMFPWAPIDPSVVMGPSP 168

Query: 739 XXXXXXXXXXXXXXXXXPSMQPYPFFRSQNPGAIPNPCSTYIPYSSPANPPIEQPSTHYA 560
                            PS+QP+PFF +QNP  IPNPCST+IPY +PANPP E PS  YA
Sbjct: 169 YSYPVPVPVPSGPIPMHPSLQPFPFFGNQNPSGIPNPCSTFIPYQTPANPPTEVPSAQYA 228

Query: 559 SLHPQASSRSHTPNKQDHKSKSSALHKGSNTGRSADSSDVATELELKTPGSAADQEL 389
                  S SH  +K D KSKSS   + SNT +  +S+DVAT+LELKTPGS++ Q+L
Sbjct: 229 -------SASHVSSKPDSKSKSSDRERSSNTEKCDESNDVATDLELKTPGSSSQQDL 278


>ref|XP_002265960.1| PREDICTED: transcription factor bHLH121-like [Vitis vinifera]
          Length = 327

 Score =  201 bits (512), Expect = 2e-49
 Identities = 103/177 (58%), Positives = 124/177 (70%)
 Frame = -2

Query: 919 EYATLSEESRELTQEKNELREEKASIKSDIDNLNVQYQQRIRVMFPWSGMDPAVMMGXXX 740
           E A LSEESREL QEKNELREEK ++KSDIDNLNVQYQQR+RVMFPW+ +DP+V+MG   
Sbjct: 110 ECAALSEESRELVQEKNELREEKVALKSDIDNLNVQYQQRLRVMFPWAPIDPSVVMGPSP 169

Query: 739 XXXXXXXXXXXXXXXXXPSMQPYPFFRSQNPGAIPNPCSTYIPYSSPANPPIEQPSTHYA 560
                            PS+QP+PFF +QNP  IPNPCST+IPY +PANPP E PS  YA
Sbjct: 170 YSYPVPVPVPSGPIPMHPSLQPFPFFGNQNPSGIPNPCSTFIPYQTPANPPTEVPSAQYA 229

Query: 559 SLHPQASSRSHTPNKQDHKSKSSALHKGSNTGRSADSSDVATELELKTPGSAADQEL 389
                  S SH  +K D KSKSS   + SNT +  +S+DVAT+LELKTPGS++ Q+L
Sbjct: 230 -------SASHVSSKPDSKSKSSDRERSSNTEKCDESNDVATDLELKTPGSSSQQDL 279


>emb|CAN69588.1| hypothetical protein VITISV_019798 [Vitis vinifera]
          Length = 332

 Score =  197 bits (500), Expect = 4e-48
 Identities = 103/178 (57%), Positives = 124/178 (69%), Gaps = 1/178 (0%)
 Frame = -2

Query: 919 EYATLSEESRE-LTQEKNELREEKASIKSDIDNLNVQYQQRIRVMFPWSGMDPAVMMGXX 743
           E A LSEESRE L QEKNELREEK ++KSDIDNLNVQYQQR+RVMFPW+ +DP+V+MG  
Sbjct: 114 ECAALSEESREVLVQEKNELREEKVALKSDIDNLNVQYQQRLRVMFPWAPIDPSVVMGPS 173

Query: 742 XXXXXXXXXXXXXXXXXXPSMQPYPFFRSQNPGAIPNPCSTYIPYSSPANPPIEQPSTHY 563
                             PS+QP+PFF +QNP  IPNPCST+IPY +PANPP E PS  Y
Sbjct: 174 PYSYPVPVPVPSGPIPMHPSLQPFPFFGNQNPSGIPNPCSTFIPYQTPANPPTEVPSAQY 233

Query: 562 ASLHPQASSRSHTPNKQDHKSKSSALHKGSNTGRSADSSDVATELELKTPGSAADQEL 389
           A       S SH  +K D KSKSS   + SNT +  +S+DVAT+LELKTPGS++ Q+L
Sbjct: 234 A-------SASHVSSKPDSKSKSSDRERSSNTEKCDESNDVATDLELKTPGSSSQQDL 284


>ref|XP_004158905.1| PREDICTED: transcription factor bHLH121-like [Cucumis sativus]
          Length = 297

 Score =  194 bits (494), Expect = 2e-47
 Identities = 101/176 (57%), Positives = 125/176 (71%)
 Frame = -2

Query: 919 EYATLSEESRELTQEKNELREEKASIKSDIDNLNVQYQQRIRVMFPWSGMDPAVMMGXXX 740
           +Y  LSEESRELTQEKNELREEKAS+KSDI+NLN QYQQR+RVMFPW+ MDP+V+MG   
Sbjct: 81  DYEALSEESRELTQEKNELREEKASLKSDIENLNAQYQQRLRVMFPWATMDPSVVMG-PP 139

Query: 739 XXXXXXXXXXXXXXXXXPSMQPYPFFRSQNPGAIPNPCSTYIPYSSPANPPIEQPSTHYA 560
                            PS+QP+ FF +QNPGAIPNPCST++PY++ AN P++QPS  YA
Sbjct: 140 YSYPVPVPVPPGPIPMHPSLQPFTFFGNQNPGAIPNPCSTFVPYTAAANHPMDQPSAQYA 199

Query: 559 SLHPQASSRSHTPNKQDHKSKSSALHKGSNTGRSADSSDVATELELKTPGSAADQE 392
                  S SH  +KQD +SKSS  H+ SN  R  +S+DVAT+LELK PGS+  Q+
Sbjct: 200 -------SNSHISSKQDSRSKSSDQHRRSNVERCDESTDVATDLELKMPGSSTMQD 248


>ref|XP_004134862.1| PREDICTED: transcription factor bHLH121-like [Cucumis sativus]
          Length = 318

 Score =  194 bits (494), Expect = 2e-47
 Identities = 101/176 (57%), Positives = 125/176 (71%)
 Frame = -2

Query: 919 EYATLSEESRELTQEKNELREEKASIKSDIDNLNVQYQQRIRVMFPWSGMDPAVMMGXXX 740
           +Y  LSEESRELTQEKNELREEKAS+KSDI+NLN QYQQR+RVMFPW+ MDP+V+MG   
Sbjct: 102 DYEALSEESRELTQEKNELREEKASLKSDIENLNAQYQQRLRVMFPWATMDPSVVMG-PP 160

Query: 739 XXXXXXXXXXXXXXXXXPSMQPYPFFRSQNPGAIPNPCSTYIPYSSPANPPIEQPSTHYA 560
                            PS+QP+ FF +QNPGAIPNPCST++PY++ AN P++QPS  YA
Sbjct: 161 YSYPVPVPVPPGPIPMHPSLQPFTFFGNQNPGAIPNPCSTFVPYTAAANHPMDQPSAQYA 220

Query: 559 SLHPQASSRSHTPNKQDHKSKSSALHKGSNTGRSADSSDVATELELKTPGSAADQE 392
                  S SH  +KQD +SKSS  H+ SN  R  +S+DVAT+LELK PGS+  Q+
Sbjct: 221 -------SNSHISSKQDSRSKSSDQHRRSNVERCDESTDVATDLELKMPGSSTMQD 269


Top