BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027275
         (1246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278571.1| PREDICTED: small RNA degrading nuclease 5-li...   532   e-149
ref|XP_002520248.1| rnase h, putative [Ricinus communis] gi|2235...   526   e-147
emb|CBI19949.3| unnamed protein product [Vitis vinifera]              520   e-145
ref|XP_003544731.1| PREDICTED: small RNA degrading nuclease 5-li...   502   e-140
ref|XP_004146782.1| PREDICTED: small RNA degrading nuclease 5-li...   499   e-139

>ref|XP_002278571.1| PREDICTED: small RNA degrading nuclease 5-like [Vitis vinifera]
          Length = 572

 Score =  532 bits (1370), Expect = e-149
 Identities = 271/358 (75%), Positives = 315/358 (87%), Gaps = 1/358 (0%)
 Frame = -1

Query: 1237 EMLSLDCEMCITVNGFELTRATLVDIEGQVVLDKLVKPSNAILDYNTRYSGITCEMLNGV 1058
            EML+LDCEMC+T  GFELTR +LVDI+GQVVLDKLVKPSN I+DYNTRYSGITCEMLNGV
Sbjct: 216  EMLALDCEMCVTSEGFELTRISLVDIKGQVVLDKLVKPSNRIIDYNTRYSGITCEMLNGV 275

Query: 1057 NTTLQDIQEEFLKLVHKETILVGHSLENDLLALKLNHNLVIDTAVLYKNPRGIRYKTALR 878
             T L+D+QE+FLKLV+KETILVGHSLENDLLALK++H+LVIDTAVLYK+PRG  YKTALR
Sbjct: 276  TTGLKDVQEDFLKLVYKETILVGHSLENDLLALKISHDLVIDTAVLYKHPRGASYKTALR 335

Query: 877  VLVRKFLSREIQDSDNGHDSIEDARAAMELALLKIRHGPDFGAPPSMSFMRKKLVTILSE 698
            VL R+FLSREIQ+S NGHDSIEDARAAMELALLKIRHGP+FG+PP  SFMRKKL+T+L++
Sbjct: 336  VLTRRFLSREIQESRNGHDSIEDARAAMELALLKIRHGPEFGSPP--SFMRKKLLTVLND 393

Query: 697  SGRTCSVIDDVSIVKRYAAGSCNAIPVSSDEEALSKARKEVKNEKVQFIWTHFSELYSYY 518
             G+T S IDD+SIV+RY + + +A PVSSD EALSKA+KEVKN+KV F+WT FSEL SY+
Sbjct: 394  YGKTSSFIDDISIVRRYTSEASHAFPVSSDVEALSKAKKEVKNDKVHFVWTQFSELNSYF 453

Query: 517  KRQAEDTEKLNGSVAEMISLLTCNKNSTKKREIRCSLTSDLKSILTRMDDRIKSLYTALP 338
            K+QAEDT+KLN  +AEMISLLTCNK ST  + I+ S+TS+LK ILT +D RI+SLY  LP
Sbjct: 454  KKQAEDTDKLNAKLAEMISLLTCNKKSTTPKGIKFSVTSELKDILTCIDTRIRSLYHELP 513

Query: 337  SNSMLIVCTGQGDTATVQRLRKML-EQKETAMCREMLVKVLEELQAQAEVALCFVGVK 167
            +N+MLI+CTG GDTA V RLRKML EQ ET + RE LVKVLEELQAQAEVALCFVGVK
Sbjct: 514  ANTMLIICTGHGDTAIVHRLRKMLREQIETTVSREKLVKVLEELQAQAEVALCFVGVK 571


>ref|XP_002520248.1| rnase h, putative [Ricinus communis] gi|223540467|gb|EEF42034.1|
            rnase h, putative [Ricinus communis]
          Length = 572

 Score =  526 bits (1354), Expect = e-147
 Identities = 263/361 (72%), Positives = 316/361 (87%), Gaps = 1/361 (0%)
 Frame = -1

Query: 1246 STNEMLSLDCEMCITVNGFELTRATLVDIEGQVVLDKLVKPSNAILDYNTRYSGITCEML 1067
            S  +ML+LDCEMCIT  GFELTR T+VD++GQVVLDKLVKPSN I+DYNTR+SGITCEML
Sbjct: 213  SAYDMLALDCEMCITKEGFELTRVTVVDVKGQVVLDKLVKPSNPIIDYNTRFSGITCEML 272

Query: 1066 NGVNTTLQDIQEEFLKLVHKETILVGHSLENDLLALKLNHNLVIDTAVLYKNPRGIRYKT 887
            NGV T+L+D+QE+FLKLVHKET+L+GHSLENDL ALK++H LVIDTAVLYK+PRG  YKT
Sbjct: 273  NGVPTSLKDVQEDFLKLVHKETLLIGHSLENDLSALKISHGLVIDTAVLYKHPRGGSYKT 332

Query: 886  ALRVLVRKFLSREIQDSDNGHDSIEDARAAMELALLKIRHGPDFGAPPSMSFMRKKLVTI 707
            ALRVL +KFLSREIQ S +GHDSIEDARAAMELALLKI++GPDFG+PP  SF+R+KL+TI
Sbjct: 333  ALRVLAKKFLSREIQQSGDGHDSIEDARAAMELALLKIKNGPDFGSPP--SFVRRKLLTI 390

Query: 706  LSESGRTCSVIDDVSIVKRYAAGSCNAIPVSSDEEALSKARKEVKNEKVQFIWTHFSELY 527
            LSESG+  SVIDDVSIVKRYA+ S +A PVSSD++ALSKA KEVKN++V F+WT  SEL 
Sbjct: 391  LSESGKASSVIDDVSIVKRYASESSHAFPVSSDDDALSKALKEVKNDRVHFVWTQLSELN 450

Query: 526  SYYKRQAEDTEKLNGSVAEMISLLTCNKNSTKKREIRCSLTSDLKSILTRMDDRIKSLYT 347
            SY+K+QA+D  K+N  +AEMISLLTC K S   + +RCS+TS+LK IL RMD R++ LY+
Sbjct: 451  SYFKKQADDEGKVNAKLAEMISLLTCQKKSANTKGVRCSMTSELKEILIRMDARVRCLYS 510

Query: 346  ALPSNSMLIVCTGQGDTATVQRLRKML-EQKETAMCREMLVKVLEELQAQAEVALCFVGV 170
            ALP+N+MLI+CTG GDTA V+RLRK+L E++ET +CRE +VKVLEELQAQAEVALCFVGV
Sbjct: 511  ALPTNTMLIICTGHGDTAIVRRLRKLLTEKQETRICREKIVKVLEELQAQAEVALCFVGV 570

Query: 169  K 167
            K
Sbjct: 571  K 571


>emb|CBI19949.3| unnamed protein product [Vitis vinifera]
          Length = 572

 Score =  520 bits (1340), Expect = e-145
 Identities = 266/358 (74%), Positives = 312/358 (87%), Gaps = 1/358 (0%)
 Frame = -1

Query: 1237 EMLSLDCEMCITVNGFELTRATLVDIEGQVVLDKLVKPSNAILDYNTRYSGITCEMLNGV 1058
            EML+LDCEMC+T  GFELTR +LVDI+GQVVLDKLVKPSN I+DYNTRYSGITCEMLNGV
Sbjct: 216  EMLALDCEMCVTSEGFELTRISLVDIKGQVVLDKLVKPSNRIIDYNTRYSGITCEMLNGV 275

Query: 1057 NTTLQDIQEEFLKLVHKETILVGHSLENDLLALKLNHNLVIDTAVLYKNPRGIRYKTALR 878
             T L+D+QE+FLKLV+KETILVGHSLENDLLALK++H+LVIDTAVLYK+PRG  YKTALR
Sbjct: 276  TTGLKDVQEDFLKLVYKETILVGHSLENDLLALKISHDLVIDTAVLYKHPRGASYKTALR 335

Query: 877  VLVRKFLSREIQDSDNGHDSIEDARAAMELALLKIRHGPDFGAPPSMSFMRKKLVTILSE 698
            VL R+FLSREIQ+S NGHDSIEDARAAMELAL   ++GP+FG+PP  SFMRKKL+T+L++
Sbjct: 336  VLTRRFLSREIQESRNGHDSIEDARAAMELALEVEKYGPEFGSPP--SFMRKKLLTVLND 393

Query: 697  SGRTCSVIDDVSIVKRYAAGSCNAIPVSSDEEALSKARKEVKNEKVQFIWTHFSELYSYY 518
             G+T S IDD+SIV+RY + + +A PVSSD EALSKA+KEVKN+KV F+WT FSEL SY+
Sbjct: 394  YGKTSSFIDDISIVRRYTSEASHAFPVSSDVEALSKAKKEVKNDKVHFVWTQFSELNSYF 453

Query: 517  KRQAEDTEKLNGSVAEMISLLTCNKNSTKKREIRCSLTSDLKSILTRMDDRIKSLYTALP 338
            K+QAEDT+KLN  +AEMISLLTCNK ST  + I+ S+TS+LK ILT +D RI+SLY  LP
Sbjct: 454  KKQAEDTDKLNAKLAEMISLLTCNKKSTTPKGIKFSVTSELKDILTCIDTRIRSLYHELP 513

Query: 337  SNSMLIVCTGQGDTATVQRLRKML-EQKETAMCREMLVKVLEELQAQAEVALCFVGVK 167
            +N+MLI+CTG GDTA V RLRKML EQ ET + RE LVKVLEELQAQAEVALCFVGVK
Sbjct: 514  ANTMLIICTGHGDTAIVHRLRKMLREQIETTVSREKLVKVLEELQAQAEVALCFVGVK 571


>ref|XP_003544731.1| PREDICTED: small RNA degrading nuclease 5-like [Glycine max]
          Length = 567

 Score =  502 bits (1293), Expect = e-140
 Identities = 252/358 (70%), Positives = 310/358 (86%), Gaps = 1/358 (0%)
 Frame = -1

Query: 1237 EMLSLDCEMCITVNGFELTRATLVDIEGQVVLDKLVKPSNAILDYNTRYSGITCEMLNGV 1058
            +ML+LDCEMCIT  GFEL+R TLVD++GQV++DKLVKPSNAI DYNTRYSGIT EML+GV
Sbjct: 211  DMLALDCEMCITSEGFELSRITLVDVKGQVLIDKLVKPSNAITDYNTRYSGITSEMLDGV 270

Query: 1057 NTTLQDIQEEFLKLVHKETILVGHSLENDLLALKLNHNLVIDTAVLYKNPRGIRYKTALR 878
             T+L+DIQEEFLKLVHKETILVGHSLENDLLALK++H+LVIDTAVLYK+PRG  +K ALR
Sbjct: 271  TTSLRDIQEEFLKLVHKETILVGHSLENDLLALKISHDLVIDTAVLYKHPRGSTHKNALR 330

Query: 877  VLVRKFLSREIQDSDNGHDSIEDARAAMELALLKIRHGPDFGAPPSMSFMRKKLVTILSE 698
             L ++FLSREIQ S NGHDSIEDARA MELALLKIR+GP+FG+PP  SF RKKL++ILSE
Sbjct: 331  FLTKRFLSREIQQSGNGHDSIEDARATMELALLKIRNGPNFGSPP--SFTRKKLLSILSE 388

Query: 697  SGRTCSVIDDVSIVKRYAAGSCNAIPVSSDEEALSKARKEVKNEKVQFIWTHFSELYSYY 518
            SG+T S+IDD+S+VKRYA+ S +AIPV+SD+ AL+KA KEVKN KV FIWT FSEL+SY 
Sbjct: 389  SGKTSSLIDDISVVKRYASESSHAIPVTSDDVALAKANKEVKNGKVHFIWTQFSELHSYL 448

Query: 517  KRQAEDTEKLNGSVAEMISLLTCNKNSTKKREIRCSLTSDLKSILTRMDDRIKSLYTALP 338
            K+QAED+E+LN  +AEM++L TC  N TK ++ +   +++LK IL RMD RI +LY +LP
Sbjct: 449  KKQAEDSERLNRRLAEMLALQTCQNNFTKGKDFKLKASAELKEILARMDARIHNLYLSLP 508

Query: 337  SNSMLIVCTGQGDTATVQRLRKML-EQKETAMCREMLVKVLEELQAQAEVALCFVGVK 167
            +N+M+I+CTG GDTA V+RLRKML EQ E+ +CRE +V++LEE+QA+AEVALCFVGVK
Sbjct: 509  TNAMMIICTGHGDTAIVRRLRKMLAEQNESNICREKIVEILEEVQARAEVALCFVGVK 566


>ref|XP_004146782.1| PREDICTED: small RNA degrading nuclease 5-like [Cucumis sativus]
          Length = 572

 Score =  499 bits (1285), Expect = e-139
 Identities = 246/361 (68%), Positives = 303/361 (83%), Gaps = 1/361 (0%)
 Frame = -1

Query: 1246 STNEMLSLDCEMCITVNGFELTRATLVDIEGQVVLDKLVKPSNAILDYNTRYSGITCEML 1067
            S NEML+LDCEMC+T  GFELTR TLVD+EG+V+LDKLVKPSNAI+DYNTRYSGITCEML
Sbjct: 213  SPNEMLALDCEMCVTCEGFELTRITLVDMEGRVLLDKLVKPSNAIVDYNTRYSGITCEML 272

Query: 1066 NGVNTTLQDIQEEFLKLVHKETILVGHSLENDLLALKLNHNLVIDTAVLYKNPRGIRYKT 887
            +GV T+L+D+Q  FL LVHKET+LVGHSLENDL+AL+++H+LV+DTAVLYK+PRG  +K+
Sbjct: 273  SGVTTSLEDVQRIFLNLVHKETVLVGHSLENDLMALRISHDLVVDTAVLYKHPRGGSHKS 332

Query: 886  ALRVLVRKFLSREIQDSDNGHDSIEDARAAMELALLKIRHGPDFGAPPSMSFMRKKLVTI 707
            ALR+L ++FLSREIQ S NGHDSIEDARA MELALLKI+HGPDFG+PPS+  +RKKL+ I
Sbjct: 333  ALRILAKRFLSREIQQSGNGHDSIEDARATMELALLKIKHGPDFGSPPSL--IRKKLLNI 390

Query: 706  LSESGRTCSVIDDVSIVKRYAAGSCNAIPVSSDEEALSKARKEVKNEKVQFIWTHFSELY 527
            L ESG+T S IDD++ VKRY + S +A PV+SD+EALS+A+KE  NEKV FIWT FSEL 
Sbjct: 391  LGESGKTSSFIDDIATVKRYCSESSHAFPVTSDDEALSRAKKEAMNEKVHFIWTQFSELN 450

Query: 526  SYYKRQAEDTEKLNGSVAEMISLLTCNKNSTKKREIRCSLTSDLKSILTRMDDRIKSLYT 347
            SY+K+Q +D EKLN  +AE++SLLTC+  S  K+  R  ++ +L+ IL RMD RI  LYT
Sbjct: 451  SYHKKQVDDEEKLNVKLAELLSLLTCDTKSVNKKRNRAKISVELQEILARMDSRINDLYT 510

Query: 346  ALPSNSMLIVCTGQGDTATVQRLRKML-EQKETAMCREMLVKVLEELQAQAEVALCFVGV 170
            +LP+N+MLI+CTG GD   VQRLRKML EQ ET++CRE +VK+LEEL AQAEVALCFV  
Sbjct: 511  SLPTNAMLIICTGHGDITLVQRLRKMLQEQSETSICREKIVKILEELHAQAEVALCFVCT 570

Query: 169  K 167
            K
Sbjct: 571  K 571