BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027265
         (239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK40065.1| unknown [Medicago truncatula]                           69   3e-10
ref|XP_003612151.1| F-box [Medicago truncatula] gi|355513486|gb|...    69   3e-10
ref|XP_003610871.1| F-box family protein [Medicago truncatula] g...    67   2e-09
ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g...    67   2e-09
ref|XP_003612244.1| F-box protein [Medicago truncatula] gi|35551...    67   2e-09

>gb|AFK40065.1| unknown [Medicago truncatula]
          Length = 479

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 32/66 (48%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
 Frame = +3

Query: 12  KYDVVGSCNGLVCLASPVFCDPAYVCNPVIGEYITLPLSNKG---MGFQIASGIGFDQSA 182
           K+D+V SCNGL+CL+ P F +P  +CNPV GE+I LP S      +  Q  +G GF    
Sbjct: 167 KFDIVNSCNGLLCLSDPSFGNPIVICNPVTGEFIRLPESTTNRTRVRMQGQAGFGFQPKT 226

Query: 183 NEYKVV 200
           NEYKV+
Sbjct: 227 NEYKVI 232


>ref|XP_003612151.1| F-box [Medicago truncatula] gi|355513486|gb|AES95109.1| F-box
           [Medicago truncatula]
          Length = 480

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 32/66 (48%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
 Frame = +3

Query: 12  KYDVVGSCNGLVCLASPVFCDPAYVCNPVIGEYITLPLSNKG---MGFQIASGIGFDQSA 182
           K+D+V SCNGL+CL+ P F +P  +CNPV GE+I LP S      +  Q  +G GF    
Sbjct: 167 KFDIVNSCNGLLCLSDPSFGNPIVICNPVTGEFIRLPESTTNRTRVRMQGQAGFGFQPKT 226

Query: 183 NEYKVV 200
           NEYKV+
Sbjct: 227 NEYKVI 232


>ref|XP_003610871.1| F-box family protein [Medicago truncatula]
           gi|355512206|gb|AES93829.1| F-box family protein
           [Medicago truncatula]
          Length = 503

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
 Frame = +3

Query: 12  KYDVVGSCNGLVCLASPVFCDPAYVCNPVIGEYITLPLSNKG---MGFQIASGIGFDQSA 182
           K+++V SCNGL+CL+ P F +P  +CNP+ GE+I LP S      +G Q  +  GF    
Sbjct: 221 KFNIVNSCNGLLCLSDPYFGNPLVICNPITGEFIRLPESTANQTRVGRQGRAAFGFQPKT 280

Query: 183 NEYKVV 200
           NEYKV+
Sbjct: 281 NEYKVI 286


>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
           gi|222843314|gb|EEE80861.1| f-box family protein
           [Populus trichocarpa]
          Length = 408

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 29/67 (43%), Positives = 43/67 (64%)
 Frame = +3

Query: 12  KYDVVGSCNGLVCLASPVFCDPAYVCNPVIGEYITLPLSNKGMGFQIASGIGFDQSANEY 191
           +++VVGSCNGL+CL+  +F D  Y+ NP  G Y  LP S +    ++  G GF+   NEY
Sbjct: 120 EFEVVGSCNGLLCLSDSLFNDSLYIYNPFTGRYKELPKSLQYPDQEVVFGFGFNPKTNEY 179

Query: 192 KVVRTIF 212
           KV+R ++
Sbjct: 180 KVIRIVY 186


>ref|XP_003612244.1| F-box protein [Medicago truncatula] gi|355513579|gb|AES95202.1|
           F-box protein [Medicago truncatula]
          Length = 476

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 31/67 (46%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
 Frame = +3

Query: 12  KYDVVGSCNGLVCLASPVFCDPAYVCNPVIGEYITLP--LSNKGMGFQIAS-GIGFDQSA 182
           K+D+V SCNGL+CL+ P   +P+ +CNPV GE+I LP   +N+     +   G GF  + 
Sbjct: 173 KFDIVNSCNGLLCLSEPTTGNPSVICNPVTGEFIRLPEATTNRTRVRMVGQVGFGFQPNT 232

Query: 183 NEYKVVR 203
           NEYKV+R
Sbjct: 233 NEYKVIR 239