BLASTX nr result

ID: Coptis24_contig00027260 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027260
         (895 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285846.1| PREDICTED: cation transport regulator-like p...   314   2e-83
ref|XP_002513793.1| Cation transport protein chaC, putative [Ric...   300   2e-79
ref|XP_002306627.1| predicted protein [Populus trichocarpa] gi|2...   298   1e-78
gb|AFK41213.1| unknown [Lotus japonicus]                              286   3e-75
gb|ACJ86040.1| unknown [Medicago truncatula]                          284   2e-74

>ref|XP_002285846.1| PREDICTED: cation transport regulator-like protein 2 [Vitis
           vinifera] gi|302141833|emb|CBI19036.3| unnamed protein
           product [Vitis vinifera]
          Length = 189

 Score =  314 bits (805), Expect = 2e-83
 Identities = 148/181 (81%), Positives = 163/181 (90%)
 Frame = +1

Query: 28  MVLWVFGYGSLIWKAGFEYNERLVGFIKGYRRVFYQGSTDHRGTPEYPGRTVTLQPVQGE 207
           MVLWVFGYGSLIWKAGFEY++R V FIKGYRRVFYQGSTDHRGTPEYPGRTVTL+P +GE
Sbjct: 1   MVLWVFGYGSLIWKAGFEYDDRRVCFIKGYRRVFYQGSTDHRGTPEYPGRTVTLEPAEGE 60

Query: 208 VCWGAAYKVSGEEAEQIALTYLEVREKQYDVKAHLDFFTDPKDATPAISGIMVYIASPDK 387
           +CWG AYKVS EE EQIALTYLEVREKQYD KA+LD + +P   TP ISG+MVYIASPDK
Sbjct: 61  ICWGVAYKVSKEEDEQIALTYLEVREKQYDKKAYLDVYAEPMATTPVISGVMVYIASPDK 120

Query: 388 TLNRNYLGPASLEEMADQMIRAEGPSGPNRDYLFQLEQALLQLGCEDKHVMDLANAVREL 567
            LNRNYLGPAS+EE+A Q+I AEGPSGPNR+YLFQLEQALLQ+GCEDKHVMDLAN VR +
Sbjct: 121 KLNRNYLGPASVEEIAKQIIHAEGPSGPNREYLFQLEQALLQMGCEDKHVMDLANEVRRI 180

Query: 568 L 570
           L
Sbjct: 181 L 181


>ref|XP_002513793.1| Cation transport protein chaC, putative [Ricinus communis]
           gi|223546879|gb|EEF48376.1| Cation transport protein
           chaC, putative [Ricinus communis]
          Length = 190

 Score =  300 bits (769), Expect = 2e-79
 Identities = 140/181 (77%), Positives = 157/181 (86%)
 Frame = +1

Query: 28  MVLWVFGYGSLIWKAGFEYNERLVGFIKGYRRVFYQGSTDHRGTPEYPGRTVTLQPVQGE 207
           MV+WVFGYGSLIWKAGF Y++RLVGFIKGYRRVFYQGSTDHRGTPEYPGRTVTL P  GE
Sbjct: 1   MVMWVFGYGSLIWKAGFNYDDRLVGFIKGYRRVFYQGSTDHRGTPEYPGRTVTLLPADGE 60

Query: 208 VCWGAAYKVSGEEAEQIALTYLEVREKQYDVKAHLDFFTDPKDATPAISGIMVYIASPDK 387
           VCWG AYK+S +E E+ ALTYLEVRE+QYD KA+LDFF DP   TPA+S +MVYI S DK
Sbjct: 61  VCWGVAYKISDKEDEETALTYLEVRERQYDQKAYLDFFADPAATTPAVSRVMVYIGSEDK 120

Query: 388 TLNRNYLGPASLEEMADQMIRAEGPSGPNRDYLFQLEQALLQLGCEDKHVMDLANAVREL 567
             N+NYLGPA LE++A Q+IRAEGPSGPNRDYLF LE ALLQ+GC+DKHVMDLAN VR +
Sbjct: 121 KHNKNYLGPAPLEDIAKQIIRAEGPSGPNRDYLFHLETALLQIGCKDKHVMDLANEVRRM 180

Query: 568 L 570
           L
Sbjct: 181 L 181


>ref|XP_002306627.1| predicted protein [Populus trichocarpa] gi|222856076|gb|EEE93623.1|
           predicted protein [Populus trichocarpa]
          Length = 182

 Score =  298 bits (763), Expect = 1e-78
 Identities = 136/178 (76%), Positives = 156/178 (87%)
 Frame = +1

Query: 34  LWVFGYGSLIWKAGFEYNERLVGFIKGYRRVFYQGSTDHRGTPEYPGRTVTLQPVQGEVC 213
           +WVFGYGSLIWKAGF Y++R+VG IKGYRRVFYQGSTDHRGTPEYPGRTVTL+P  GEVC
Sbjct: 1   MWVFGYGSLIWKAGFNYDDRVVGLIKGYRRVFYQGSTDHRGTPEYPGRTVTLEPADGEVC 60

Query: 214 WGAAYKVSGEEAEQIALTYLEVREKQYDVKAHLDFFTDPKDATPAISGIMVYIASPDKTL 393
           WG AYK+S +E +++ALTYLEVREKQYD KA+LDFFTDP   TPA+SG+MVYI SPDK  
Sbjct: 61  WGVAYKISKKEDQEVALTYLEVREKQYDEKAYLDFFTDPAATTPAVSGVMVYIGSPDKRH 120

Query: 394 NRNYLGPASLEEMADQMIRAEGPSGPNRDYLFQLEQALLQLGCEDKHVMDLANAVREL 567
           N+NYLGPA LEE+A Q+  AEGPSGPNRDYLF LE ALLQ+GC+DKHV+DLAN VR +
Sbjct: 121 NQNYLGPAPLEEIAKQIFYAEGPSGPNRDYLFHLESALLQIGCKDKHVIDLANEVRRI 178


>gb|AFK41213.1| unknown [Lotus japonicus]
          Length = 185

 Score =  286 bits (733), Expect = 3e-75
 Identities = 131/181 (72%), Positives = 162/181 (89%)
 Frame = +1

Query: 28  MVLWVFGYGSLIWKAGFEYNERLVGFIKGYRRVFYQGSTDHRGTPEYPGRTVTLQPVQGE 207
           MV+WVFGYGSLI KAGF+Y+ERLVGFIK YRRVFYQGSTDHRGTPE+PGRTVTL+P +GE
Sbjct: 1   MVMWVFGYGSLITKAGFKYDERLVGFIKDYRRVFYQGSTDHRGTPEFPGRTVTLEPAEGE 60

Query: 208 VCWGAAYKVSGEEAEQIALTYLEVREKQYDVKAHLDFFTDPKDATPAISGIMVYIASPDK 387
           +CWGAAYK+S +E ++IALTYLEVREKQYD K ++D FT+    TPAISG +VYIASP+K
Sbjct: 61  ICWGAAYKISNKEDQEIALTYLEVREKQYDKKEYVDVFTEVNATTPAISGALVYIASPNK 120

Query: 388 TLNRNYLGPASLEEMADQMIRAEGPSGPNRDYLFQLEQALLQLGCEDKHVMDLANAVREL 567
            +N NYLGPAS+E++A Q+++AEGP+GPNR+YLF LE+ALLQ+GC+DKHV+DLAN VR +
Sbjct: 121 KVNVNYLGPASVEDIARQIVQAEGPTGPNREYLFLLEKALLQIGCKDKHVIDLANEVRRI 180

Query: 568 L 570
           +
Sbjct: 181 I 181


>gb|ACJ86040.1| unknown [Medicago truncatula]
          Length = 221

 Score =  284 bits (726), Expect = 2e-74
 Identities = 132/181 (72%), Positives = 159/181 (87%)
 Frame = +1

Query: 28  MVLWVFGYGSLIWKAGFEYNERLVGFIKGYRRVFYQGSTDHRGTPEYPGRTVTLQPVQGE 207
           M +WVFGYGSLI KAGF Y+ERLVGFIK YRRVFYQGSTDHRGTPE+PGRTVTL+P QGE
Sbjct: 1   MAIWVFGYGSLISKAGFNYDERLVGFIKDYRRVFYQGSTDHRGTPEFPGRTVTLEPAQGE 60

Query: 208 VCWGAAYKVSGEEAEQIALTYLEVREKQYDVKAHLDFFTDPKDATPAISGIMVYIASPDK 387
           +CWGAAYK++ +E ++IALTYL VREKQYD K ++D FT+    TPAISG +VYIASPDK
Sbjct: 61  ICWGAAYKITKKEDQEIALTYLGVREKQYDRKEYVDVFTELTATTPAISGALVYIASPDK 120

Query: 388 TLNRNYLGPASLEEMADQMIRAEGPSGPNRDYLFQLEQALLQLGCEDKHVMDLANAVREL 567
            +N NYLGPAS+EE+A Q+++AEGP+GPNR+YLF LE+ALLQ+GC+DKHV+DLAN VR +
Sbjct: 121 KVNVNYLGPASVEEIARQIVQAEGPTGPNREYLFLLEKALLQIGCQDKHVIDLANEVRRI 180

Query: 568 L 570
           L
Sbjct: 181 L 181


Top