BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027256
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002877533.1| hypothetical protein ARALYDRAFT_323324 [Arab...   132   4e-29
ref|NP_190280.5| antiviral helicase SKI2 [Arabidopsis thaliana] ...   132   4e-29
emb|CAB61942.1| putative helicase [Arabidopsis thaliana]              132   4e-29
ref|XP_002520439.1| helicase, putative [Ricinus communis] gi|223...   130   8e-29
ref|XP_004163748.1| PREDICTED: helicase SKI2W-like [Cucumis sati...   128   4e-28

>ref|XP_002877533.1| hypothetical protein ARALYDRAFT_323324 [Arabidopsis lyrata subsp.
           lyrata] gi|297323371|gb|EFH53792.1| hypothetical protein
           ARALYDRAFT_323324 [Arabidopsis lyrata subsp. lyrata]
          Length = 1369

 Score =  132 bits (331), Expect = 4e-29
 Identities = 60/93 (64%), Positives = 76/93 (81%)
 Frame = +1

Query: 85  ENRSMEMDVSELMEGAHESGSTPRMPGPAKDFVRGSIGNRPFRPGGLDVSQSAQKVVPEG 264
           E +S+E+D+SE M G  +SG  PRM GP KDF+RGS+ NRPFRPGGL+ SQS+++V+PEG
Sbjct: 126 EPKSVEVDLSEQMYGDQDSGFFPRMVGPPKDFLRGSVNNRPFRPGGLEDSQSSERVLPEG 185

Query: 265 ARSGQWVREILDGGPAQGIPPGFKHGLDLGDLM 363
             SGQWV+E+L+GGPAQ +PP FK  LDLGDLM
Sbjct: 186 VSSGQWVQELLNGGPAQTVPPSFKQSLDLGDLM 218


>ref|NP_190280.5| antiviral helicase SKI2 [Arabidopsis thaliana]
           gi|332644703|gb|AEE78224.1| antiviral helicase SKI2
           [Arabidopsis thaliana]
          Length = 1347

 Score =  132 bits (331), Expect = 4e-29
 Identities = 60/93 (64%), Positives = 76/93 (81%)
 Frame = +1

Query: 85  ENRSMEMDVSELMEGAHESGSTPRMPGPAKDFVRGSIGNRPFRPGGLDVSQSAQKVVPEG 264
           E +S+E+D+SE M G  +SG  PRM GP KDF+RGS+ NRPFRPGGL+ SQS+++V+PEG
Sbjct: 126 EPKSVEVDLSEQMYGDQDSGFFPRMVGPPKDFLRGSVNNRPFRPGGLEDSQSSERVLPEG 185

Query: 265 ARSGQWVREILDGGPAQGIPPGFKHGLDLGDLM 363
             SGQWV+E+L+GGPAQ +PP FK  LDLGDLM
Sbjct: 186 VSSGQWVQELLNGGPAQTVPPSFKQSLDLGDLM 218


>emb|CAB61942.1| putative helicase [Arabidopsis thaliana]
          Length = 1347

 Score =  132 bits (331), Expect = 4e-29
 Identities = 60/93 (64%), Positives = 76/93 (81%)
 Frame = +1

Query: 85  ENRSMEMDVSELMEGAHESGSTPRMPGPAKDFVRGSIGNRPFRPGGLDVSQSAQKVVPEG 264
           E +S+E+D+SE M G  +SG  PRM GP KDF+RGS+ NRPFRPGGL+ SQS+++V+PEG
Sbjct: 126 EPKSVEVDLSEQMYGDQDSGFFPRMVGPPKDFLRGSVNNRPFRPGGLEDSQSSERVLPEG 185

Query: 265 ARSGQWVREILDGGPAQGIPPGFKHGLDLGDLM 363
             SGQWV+E+L+GGPAQ +PP FK  LDLGDLM
Sbjct: 186 VSSGQWVQELLNGGPAQTVPPSFKQSLDLGDLM 218


>ref|XP_002520439.1| helicase, putative [Ricinus communis] gi|223540281|gb|EEF41852.1|
           helicase, putative [Ricinus communis]
          Length = 1335

 Score =  130 bits (328), Expect = 8e-29
 Identities = 62/92 (67%), Positives = 76/92 (82%)
 Frame = +1

Query: 85  ENRSMEMDVSELMEGAHESGSTPRMPGPAKDFVRGSIGNRPFRPGGLDVSQSAQKVVPEG 264
           E +S++MDVSEL+  A +S S PR+ GPAKDFVRGSI NRPFRPGGLD SQS +K++P G
Sbjct: 127 EPKSVQMDVSELI--AQDSSSLPRIAGPAKDFVRGSINNRPFRPGGLDDSQSLEKILPAG 184

Query: 265 ARSGQWVREILDGGPAQGIPPGFKHGLDLGDL 360
           A +G+W+RE+L+GGPAQ IPP  K GLDLGDL
Sbjct: 185 AANGEWLREVLNGGPAQSIPPSLKKGLDLGDL 216


>ref|XP_004163748.1| PREDICTED: helicase SKI2W-like [Cucumis sativus]
          Length = 684

 Score =  128 bits (322), Expect = 4e-28
 Identities = 62/94 (65%), Positives = 73/94 (77%)
 Frame = +1

Query: 79  TSENRSMEMDVSELMEGAHESGSTPRMPGPAKDFVRGSIGNRPFRPGGLDVSQSAQKVVP 258
           T E  S ++DVSEL     ESGS PR+PGPAKDFVRGSI NRPFRPGGLD SQS  +++P
Sbjct: 125 TWEPDSRQVDVSELNVETQESGSQPRVPGPAKDFVRGSINNRPFRPGGLDDSQSIDRILP 184

Query: 259 EGARSGQWVREILDGGPAQGIPPGFKHGLDLGDL 360
           + A +G+WV E+L+GGPAQ IPP  K GLDLGDL
Sbjct: 185 DAASNGEWVHEVLNGGPAQFIPPILKKGLDLGDL 218