BLASTX nr result
ID: Coptis24_contig00027254
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00027254 (367 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002304995.1| predicted protein [Populus trichocarpa] gi|2... 92 6e-17 gb|AFK42939.1| unknown [Medicago truncatula] 87 1e-15 ref|XP_003635065.1| PREDICTED: uncharacterized protein LOC100233... 85 7e-15 ref|XP_002524694.1| conserved hypothetical protein [Ricinus comm... 81 1e-13 gb|AAO12870.1| wound induced protein-like, partial [Vitis vinifera] 70 2e-10 >ref|XP_002304995.1| predicted protein [Populus trichocarpa] gi|222847959|gb|EEE85506.1| predicted protein [Populus trichocarpa] Length = 87 Score = 91.7 bits (226), Expect = 6e-17 Identities = 52/85 (61%), Positives = 59/85 (69%), Gaps = 1/85 (1%) Frame = -3 Query: 275 MSLRYVSRVFYQVSMRAAQGIKDQASKCDSASTIRSLKD-XXXXXSKQIRRFSNAQGSYQ 99 MSLRY SRV YQ +R QG+KDQASKCDS S I+SL+D SKQ RRFS + S Sbjct: 1 MSLRYASRVLYQSGVRVVQGMKDQASKCDS-SAIKSLRDSACSSSSKQARRFSGSVDSSA 59 Query: 98 VAKNGNEKLKKAEESLRTVMYLSCW 24 NEK K+AEESLRTVM+LSCW Sbjct: 60 YMNAKNEKFKQAEESLRTVMFLSCW 84 >gb|AFK42939.1| unknown [Medicago truncatula] Length = 89 Score = 87.4 bits (215), Expect = 1e-15 Identities = 49/88 (55%), Positives = 60/88 (68%), Gaps = 4/88 (4%) Frame = -3 Query: 275 MSLRYVSRVFYQVSMRAAQGIKDQASKCDSASTIRSLKDXXXXXSKQIRRFSN---AQGS 105 MSLRY+ RV YQ +MR QG+KDQ+SKCD STI+SL+D + R FSN + S Sbjct: 1 MSLRYIGRVLYQTAMRTFQGMKDQSSKCD--STIKSLRDSTSSKQVKARVFSNNTAFENS 58 Query: 104 YQVAKNGN-EKLKKAEESLRTVMYLSCW 24 K N +K+K+AEESLRTVMYLSCW Sbjct: 59 SSAFKGSNSDKVKRAEESLRTVMYLSCW 86 >ref|XP_003635065.1| PREDICTED: uncharacterized protein LOC100233117 [Vitis vinifera] Length = 89 Score = 84.7 bits (208), Expect = 7e-15 Identities = 49/88 (55%), Positives = 59/88 (67%), Gaps = 4/88 (4%) Frame = -3 Query: 275 MSLRYVSRVFYQVSMRAAQGIKDQASKCDSASTIRSLKDXXXXXSK--QIRRFSNAQGS- 105 MSLR + RV YQ MR G+KDQASKCD T++SL+D S Q RRFS A S Sbjct: 1 MSLRCLGRVVYQAGMRVMLGMKDQASKCDP--TLKSLRDSGCSSSSSTQARRFSGALDSA 58 Query: 104 -YQVAKNGNEKLKKAEESLRTVMYLSCW 24 ++ KN E+LK++EESLRTVMYLSCW Sbjct: 59 AFKAVKNAEERLKQSEESLRTVMYLSCW 86 >ref|XP_002524694.1| conserved hypothetical protein [Ricinus communis] gi|223536055|gb|EEF37713.1| conserved hypothetical protein [Ricinus communis] Length = 82 Score = 80.9 bits (198), Expect = 1e-13 Identities = 50/88 (56%), Positives = 57/88 (64%), Gaps = 4/88 (4%) Frame = -3 Query: 275 MSLRYVSRVFYQVSMRAAQGIKDQASKCDSASTIRSLKDXXXXXSKQIRRFSNAQG--SY 102 MSLRY SRV YQ MRA QG+KD+ASK + S S KQ RRFS A S Sbjct: 1 MSLRYASRVMYQAGMRALQGMKDKASKSLTESAASS---------KQARRFSGATAVDSD 51 Query: 101 QVAKNG--NEKLKKAEESLRTVMYLSCW 24 ++K+ N+KLKKAEESLRTVMYLSCW Sbjct: 52 ALSKSAAKNDKLKKAEESLRTVMYLSCW 79 >gb|AAO12870.1| wound induced protein-like, partial [Vitis vinifera] Length = 71 Score = 69.7 bits (169), Expect = 2e-10 Identities = 40/70 (57%), Positives = 49/70 (70%), Gaps = 4/70 (5%) Frame = -3 Query: 221 QGIKDQASKCDSASTIRSLKDXXXXXSK--QIRRFSNAQGS--YQVAKNGNEKLKKAEES 54 QG+KDQASKCD T++SL+D S Q RRFS A S ++ KN E+LK++EES Sbjct: 1 QGMKDQASKCDP--TLKSLRDSGCSSSSSTQARRFSGALDSAAFKAVKNAEERLKQSEES 58 Query: 53 LRTVMYLSCW 24 LRTVMYLSCW Sbjct: 59 LRTVMYLSCW 68