BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027243
         (696 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|2...   140   2e-31
ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|2...   118   1e-24
ref|XP_002865998.1| hypothetical protein ARALYDRAFT_495460 [Arab...   117   3e-24
ref|XP_002877762.1| F-box family protein [Arabidopsis lyrata sub...   114   1e-23
gb|AFK40721.1| unknown [Lotus japonicus]                              111   1e-22

>ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|222859666|gb|EEE97213.1|
           predicted protein [Populus trichocarpa]
          Length = 420

 Score =  140 bits (354), Expect = 2e-31
 Identities = 81/179 (45%), Positives = 113/179 (63%), Gaps = 1/179 (0%)
 Frame = +2

Query: 2   LHYLLSFLPTKDAVATSVLSTRWRFLWTSVPKLDFDYHGFYGTSELARRFMNSIDRVLLF 181
           L ++LSFL TKDAV TS+LS +W  LW S+  L+F    F    ++   FMNS++RVLL 
Sbjct: 48  LQHILSFLETKDAVRTSILSRKWEHLWKSLSNLEFHQCYFKAKRKI---FMNSVERVLLL 104

Query: 182 HDLSNIQKFSLNTGSGCDDSRISTWISAIVKHKVQELDLN-HSSFRGESIVLPLALFSCT 358
            D SNI+KF+L+ G   D +R  TW+SA V   V+EL +N +     ES V PL LF+C 
Sbjct: 105 RDSSNIEKFTLSCGID-DATRTRTWVSAAVNRNVKELCVNFYEGGESESFVSPLCLFTCA 163

Query: 359 SLQVLKLSSAGVVKVPSSISFPYLKILQLKYLEFFNECLTERFSSFPVLEDLSISKCKW 535
           +L  LK++S GV+++ SSIS P LKIL L+++ F +E  T++  +   LE L IS   W
Sbjct: 164 TLTKLKITSHGVLRLSSSISLPCLKILSLQHVVFPDEDSTQQILNLRTLEKLKISYYDW 222


>ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|222859667|gb|EEE97214.1|
           predicted protein [Populus trichocarpa]
          Length = 460

 Score =  118 bits (296), Expect = 1e-24
 Identities = 73/179 (40%), Positives = 102/179 (56%), Gaps = 1/179 (0%)
 Frame = +2

Query: 2   LHYLLSFLPTKDAVATSVLSTRWRFLWTSVPKLDFDYHGFYGTSELARR-FMNSIDRVLL 178
           L ++LSFL T+ AV TS+LS +W  LW S   L F     +G     R+ FM+ +DRVL 
Sbjct: 36  LEHILSFLSTEAAVRTSILSKKWLHLWKSTTNLTF-----FGLKSPKRKLFMDFVDRVLA 90

Query: 179 FHDLSNIQKFSLNTGSGCDDSRISTWISAIVKHKVQELDLNHSSFRGESIVLPLALFSCT 358
               SNI +F L+     D SR+ TWISA V   V++L L    F   S VLP  LF+C 
Sbjct: 91  LRGPSNIVQFYLSCEVKDDPSRVGTWISAAVNRNVKDLYLELRDFEA-SFVLPHCLFNCE 149

Query: 359 SLQVLKLSSAGVVKVPSSISFPYLKILQLKYLEFFNECLTERFSSFPVLEDLSISKCKW 535
           +L  L+++   ++K+PSSIS   LKIL L  + F ++  T++  S P L +L I +C W
Sbjct: 150 TLTELEINMPYILKLPSSISLSCLKILNLYEVIFTDDHSTQQLFSLPNLVELEIHECNW 208


>ref|XP_002865998.1| hypothetical protein ARALYDRAFT_495460 [Arabidopsis lyrata subsp.
           lyrata] gi|297311833|gb|EFH42257.1| hypothetical protein
           ARALYDRAFT_495460 [Arabidopsis lyrata subsp. lyrata]
          Length = 401

 Score =  117 bits (292), Expect = 3e-24
 Identities = 69/173 (39%), Positives = 103/173 (59%), Gaps = 1/173 (0%)
 Frame = +2

Query: 11  LLSFLPTKDAVATSVLSTRWRFLWTSVPKLDFDYHGFYGTSELARRFMNSIDRVLLFHDL 190
           +LS LPTK+AV TS+LSTRWR LW  VP LD +   F       R F++ + R    H  
Sbjct: 12  ILSHLPTKEAVRTSILSTRWRNLWQLVPVLDLNGREF-------RLFVSFVGRFFDIHKD 64

Query: 191 SNIQKFSLNTGSGCDDSRISTWISAIVKHKVQELDLNHSSFRGESIVLPLALFSCTSLQV 370
           S IQK  L        S +++WI  + + ++Q +D++H  +R E   +PL+L++C +L  
Sbjct: 65  SCIQKLCLRISDQAGKSYLTSWIDLVTRRRIQHIDISHVFYRPEFGDIPLSLYTCDTLVH 124

Query: 371 LKLSSAGVVKVPSSISFPYLKILQLKYLEFFNE-CLTERFSSFPVLEDLSISK 526
           L+LS   +V V   +S P LKIL L+++++ NE  L +  S  PVLEDL+I+K
Sbjct: 125 LRLSLLTMVNV-EFVSLPCLKILHLEFVKYTNETTLDKLISCSPVLEDLTIAK 176


>ref|XP_002877762.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297323600|gb|EFH54021.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 426

 Score =  114 bits (286), Expect = 1e-23
 Identities = 81/233 (34%), Positives = 120/233 (51%), Gaps = 9/233 (3%)
 Frame = +2

Query: 11  LLSFLPTKDAVATSVLSTRWRFLWTSVPKLDFDYH-----GFYGTSELARRFMNSIDRVL 175
           + S LPTKD V T +LS RW+FLWT VPKL FD        +YG      RF+  +D+ +
Sbjct: 15  IFSSLPTKDVVVTMLLSKRWKFLWTMVPKLRFDDEFELDPSYYG------RFLKYVDKSM 68

Query: 176 LFHDLSNIQKFSLNTGSGCDDSRISTWISAIVKHKVQELDLNH--SSFR-GESIVLPLAL 346
           + +    ++    + G  C    I+TWI   +   ++EL+++H  + FR   SI LP +L
Sbjct: 69  VLNRAQVLETVKFDVGPCCSSEDIATWIRIGMVRHMRELEISHCEAYFREHRSIKLPKSL 128

Query: 347 FSCTSLQVLKLSSAGVVKVPSSISFPYLKILQLKYLEFFNECLTER-FSSFPVLEDLSIS 523
           ++   L+VLKL+S  V+ VP ++ FP LK L L  +E+  +    R  S  PVLEDL + 
Sbjct: 129 YTYEKLEVLKLASTVVLNVPIAVCFPSLKSLHLVCVEYKTKKSHRRLLSGCPVLEDLVLD 188

Query: 524 KCKWXXXXXXXXXXXTALKRLVMEITDSYKGGNIDFFKMNAPSLVSLSWVSDY 682
           K                L+RL +  T     G+  F  +NAPSL   ++V  Y
Sbjct: 189 KSYNSFHVRSFYVEIPTLQRLSILDTSGELYGDFTFV-VNAPSLKYFNFVDFY 240


>gb|AFK40721.1| unknown [Lotus japonicus]
          Length = 394

 Score =  111 bits (278), Expect = 1e-22
 Identities = 72/180 (40%), Positives = 104/180 (57%), Gaps = 9/180 (5%)
 Frame = +2

Query: 2   LHYLLSFLPTKDAVATSVLSTRWRFLWTSVPKLDFDYHGFYGTSELARRFMNSIDRVLLF 181
           L ++LS L TK+AV TS+LS RW  LW SVP LDFD    YG  E+  RF+ ++ +V+L 
Sbjct: 18  LCHILSLLTTKEAVTTSILSKRWIPLWRSVPTLDFDDSNLYGGDEVYARFVEAVYKVILA 77

Query: 182 HDLSN-IQKFSL-NTGSGCDDSRISTWISAIVKHKVQELDLNHSSFRGESIVLP------ 337
            D +  I+KF L  T    D + IS W++ ++K +V+ +D++      E + LP      
Sbjct: 78  RDFNQPIKKFRLVLTERLKDPANISVWVNLVLKRRVEHIDISLHFEDDEFLELPHIVVDT 137

Query: 338 LALFSCTSLQVLKLSSAGVVKVPSSISFPYLKILQLKYLEFFNE-CLTERFSSFPVLEDL 514
            ++FSCT+L VLKL    +    SS+  P+LK+L L+ L   +E CL E  S    LEDL
Sbjct: 138 PSMFSCTTLVVLKLEGLELKANFSSVDLPFLKVLHLQDLLLQDEGCLAEILSGCLALEDL 197