BLASTX nr result
ID: Coptis24_contig00027240
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00027240 (300 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_179383.3| transformation/transcription domain-associated ... 83 5e-23 ref|XP_002886137.1| FAT domain-containing protein [Arabidopsis l... 83 5e-23 ref|XP_002327756.1| predicted protein [Populus trichocarpa] gi|2... 92 4e-17 ref|XP_003631895.1| PREDICTED: transformation/transcription doma... 91 1e-16 emb|CBI17379.3| unnamed protein product [Vitis vinifera] 91 1e-16 >ref|NP_179383.3| transformation/transcription domain-associated protein [Arabidopsis thaliana] gi|330251608|gb|AEC06702.1| transformation/transcription domain-associated protein [Arabidopsis thaliana] Length = 3858 Score = 82.8 bits (203), Expect(2) = 5e-23 Identities = 41/56 (73%), Positives = 49/56 (87%) Frame = -3 Query: 298 EAFVNVREQAKSYLEMQGEISSGLDLINSTNLDHFLAKQNAEIFRLRGDFLLKLND 131 EAFV +REQAK+YLEM+GE +SGL+LINSTNL++F K AEIFRL+GDF LKLND Sbjct: 3002 EAFVKIREQAKAYLEMKGERASGLNLINSTNLEYFPDKIKAEIFRLKGDFHLKLND 3057 Score = 49.7 bits (117), Expect(2) = 5e-23 Identities = 20/28 (71%), Positives = 24/28 (85%) Frame = -1 Query: 132 TENANIAYSNAVSLFKYFPKGWASWGIF 49 TE+ANIAYSNA++LFK PKGW SWG + Sbjct: 3058 TESANIAYSNAITLFKNLPKGWISWGSY 3085 >ref|XP_002886137.1| FAT domain-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297331977|gb|EFH62396.1| FAT domain-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 3796 Score = 82.8 bits (203), Expect(2) = 5e-23 Identities = 41/56 (73%), Positives = 49/56 (87%) Frame = -3 Query: 298 EAFVNVREQAKSYLEMQGEISSGLDLINSTNLDHFLAKQNAEIFRLRGDFLLKLND 131 EAFV +REQAK+YLEM+GE +SGL+LINSTNL++F K AEIFRL+GDF LKLND Sbjct: 2938 EAFVKIREQAKAYLEMKGERASGLNLINSTNLEYFPDKIKAEIFRLKGDFHLKLND 2993 Score = 49.7 bits (117), Expect(2) = 5e-23 Identities = 20/28 (71%), Positives = 24/28 (85%) Frame = -1 Query: 132 TENANIAYSNAVSLFKYFPKGWASWGIF 49 TE+ANIAYSNA++LFK PKGW SWG + Sbjct: 2994 TESANIAYSNAITLFKNLPKGWISWGSY 3021 >ref|XP_002327756.1| predicted protein [Populus trichocarpa] gi|222836841|gb|EEE75234.1| predicted protein [Populus trichocarpa] Length = 3881 Score = 92.0 bits (227), Expect = 4e-17 Identities = 51/92 (55%), Positives = 66/92 (71%), Gaps = 3/92 (3%) Frame = -3 Query: 298 EAFVNVREQAKSYLEMQGEISSGLDLINSTNLDHFLAKQNAEIFRLRGDFLLKLND*KC* 119 EAFV +REQAK+YLEM+GE++SGL+LINSTNL++F K AEIFRLRGDFLLKLND + Sbjct: 3028 EAFVKIREQAKAYLEMKGELTSGLNLINSTNLEYFPVKHKAEIFRLRGDFLLKLNDSEDA 3087 Query: 118 YCIF*CSQPVQIFSQ-RVG*L--GNFCDKVYK 32 + S + +F G + GN+CD Y+ Sbjct: 3088 NIAY--SNAISVFKNLPKGWISWGNYCDTAYR 3117 >ref|XP_003631895.1| PREDICTED: transformation/transcription domain-associated protein [Vitis vinifera] Length = 3906 Score = 90.9 bits (224), Expect = 1e-16 Identities = 50/93 (53%), Positives = 66/93 (70%), Gaps = 3/93 (3%) Frame = -3 Query: 298 EAFVNVREQAKSYLEMQGEISSGLDLINSTNLDHFLAKQNAEIFRLRGDFLLKLND*KC* 119 EAFV +REQAK+YLEM+GE+++GL+LINSTNL++F K AEIFRL+GDFLLKLN+ C Sbjct: 3032 EAFVKIREQAKAYLEMKGELTNGLNLINSTNLEYFPVKHKAEIFRLKGDFLLKLNE--CE 3089 Query: 118 YCIF*CSQPVQIFSQ-RVG*L--GNFCDKVYKK 29 S + +F G + GN+CD YK+ Sbjct: 3090 NANLSYSNAITLFKNLPKGWISWGNYCDMAYKE 3122 >emb|CBI17379.3| unnamed protein product [Vitis vinifera] Length = 3681 Score = 90.9 bits (224), Expect = 1e-16 Identities = 50/93 (53%), Positives = 66/93 (70%), Gaps = 3/93 (3%) Frame = -3 Query: 298 EAFVNVREQAKSYLEMQGEISSGLDLINSTNLDHFLAKQNAEIFRLRGDFLLKLND*KC* 119 EAFV +REQAK+YLEM+GE+++GL+LINSTNL++F K AEIFRL+GDFLLKLN+ C Sbjct: 2829 EAFVKIREQAKAYLEMKGELTNGLNLINSTNLEYFPVKHKAEIFRLKGDFLLKLNE--CE 2886 Query: 118 YCIF*CSQPVQIFSQ-RVG*L--GNFCDKVYKK 29 S + +F G + GN+CD YK+ Sbjct: 2887 NANLSYSNAITLFKNLPKGWISWGNYCDMAYKE 2919