BLASTX nr result

ID: Coptis24_contig00027238 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027238
         (586 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...   119   5e-25
ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|2...   118   6e-25
ref|XP_002317320.1| predicted protein [Populus trichocarpa] gi|2...   118   8e-25
ref|XP_002333406.1| predicted protein [Populus trichocarpa] gi|2...   118   8e-25
ref|XP_002331734.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-24

>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
           predicted protein [Populus trichocarpa]
          Length = 1386

 Score =  119 bits (297), Expect = 5e-25
 Identities = 60/172 (34%), Positives = 94/172 (54%), Gaps = 3/172 (1%)
 Frame = -3

Query: 578 STTTELNSCAPIFEDGAAVV--PQDIIDEGISEWKDTVVGYFLDKRLGFPFVKSTLERTW 405
           S+   L+   P   DG   V  P D+ ++G   WK T+VG+F+ ++L +P V S  +R W
Sbjct: 120 SSVRNLHFAPPTTTDGRVTVAPPLDVFEDGCEFWKSTLVGHFVGQKLPYPVVNSIAKRIW 179

Query: 404 KLKGTMEI-TTDRELFFIRFAMIEDKQMVLEGGPLFIAGKIFVIRPWSPEVEGQKSNINT 228
              G  E+ ++D   F   F  ++    VLE  P  +A +  V++ W P ++  K ++  
Sbjct: 180 SSYGLSEVLSSDNGFFIFNFDSVDHATNVLERAPWHMANRPLVLKRWQPNMQFLKDDLAR 239

Query: 227 VPIWAKIFKVSKELWTKNGLSYLASLIGEPLCMDGATSEKKRLDFAKVCVTI 72
           VP+W +++ V  E WT  GLS +AS +G PL  D  T  +KRL +A+VCV I
Sbjct: 240 VPVWVRLYNVPLEYWTIKGLSCVASAVGVPLHADHTTLLRKRLSYARVCVEI 291


>ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|222858226|gb|EEE95773.1|
           predicted protein [Populus trichocarpa]
          Length = 809

 Score =  118 bits (296), Expect = 6e-25
 Identities = 61/172 (35%), Positives = 93/172 (54%), Gaps = 3/172 (1%)
 Frame = -3

Query: 578 STTTELNSCAPIFEDGAAVV--PQDIIDEGISEWKDTVVGYFLDKRLGFPFVKSTLERTW 405
           S+   L+   P   DG   V  P D+ ++G   WK T+VG+F+ ++L +P V S  +R W
Sbjct: 120 SSVRNLHFAPPTMTDGRVKVAPPLDVFEDGCEFWKSTLVGHFVGQKLPYPVVNSIAKRIW 179

Query: 404 KLKGTMEI-TTDRELFFIRFAMIEDKQMVLEGGPLFIAGKIFVIRPWSPEVEGQKSNINT 228
              G  E+ ++D   F   F  ++    VLE  P  +A +  V++ W P ++  K +   
Sbjct: 180 SSYGLSEVLSSDNGFFIFNFDSVDHATNVLERAPWHMANRPLVLKRWQPNMQFLKDDFAR 239

Query: 227 VPIWAKIFKVSKELWTKNGLSYLASLIGEPLCMDGATSEKKRLDFAKVCVTI 72
           VP+W +++ V  E WT  GLS +AS IG PL  D  T  +KRL +A+VCV I
Sbjct: 240 VPVWVRLYNVPLEYWTIKGLSCVASAIGVPLHADHTTLLRKRLSYARVCVEI 291


>ref|XP_002317320.1| predicted protein [Populus trichocarpa] gi|222860385|gb|EEE97932.1|
           predicted protein [Populus trichocarpa]
          Length = 761

 Score =  118 bits (295), Expect = 8e-25
 Identities = 61/172 (35%), Positives = 93/172 (54%), Gaps = 3/172 (1%)
 Frame = -3

Query: 578 STTTELNSCAPIFEDGAAVV--PQDIIDEGISEWKDTVVGYFLDKRLGFPFVKSTLERTW 405
           S+   L+   P   DG   V  P D+ ++G   WK T+VG+F+ ++L +P V S  +R W
Sbjct: 120 SSVRNLHFAPPTMTDGRVTVAPPLDVFEDGCEFWKSTLVGHFMGQKLPYPVVNSIAKRIW 179

Query: 404 KLKGTMEI-TTDRELFFIRFAMIEDKQMVLEGGPLFIAGKIFVIRPWSPEVEGQKSNINT 228
              G +E+ ++D   F   F  ++    VLE  P  +A    V++ W P ++  K ++  
Sbjct: 180 SSYGLLEVLSSDNGFFIFNFDSVDRATNVLERAPWHMANMPLVLKRWQPNMQFLKDDLAR 239

Query: 227 VPIWAKIFKVSKELWTKNGLSYLASLIGEPLCMDGATSEKKRLDFAKVCVTI 72
           VP+W  ++ V  E WT  GLS +AS IG PL  D  T  +KRL +A+VCV I
Sbjct: 240 VPVWVWLYNVPLEYWTIKGLSCVASAIGVPLHADHTTFLRKRLSYARVCVEI 291


>ref|XP_002333406.1| predicted protein [Populus trichocarpa] gi|222836432|gb|EEE74839.1|
           predicted protein [Populus trichocarpa]
          Length = 1166

 Score =  118 bits (295), Expect = 8e-25
 Identities = 59/172 (34%), Positives = 94/172 (54%), Gaps = 3/172 (1%)
 Frame = -3

Query: 578 STTTELNSCAPIFEDGAAVV--PQDIIDEGISEWKDTVVGYFLDKRLGFPFVKSTLERTW 405
           S+   ++   P   DG   V  P D+ ++G   WK T+VG+F+ ++L +P V S  +R W
Sbjct: 120 SSVRNMHFAPPTTTDGRVTVAPPLDVFEDGCEFWKSTLVGHFVGQKLPYPVVNSIAKRIW 179

Query: 404 KLKGTMEI-TTDRELFFIRFAMIEDKQMVLEGGPLFIAGKIFVIRPWSPEVEGQKSNINT 228
              G  E+ ++D   F   F  ++    VLE  P  +A +  V++ W P ++  K ++  
Sbjct: 180 SSYGLSEVLSSDNGFFIFNFDYVDHATNVLERAPWHMANRPLVLKRWQPNMQFLKDDLAR 239

Query: 227 VPIWAKIFKVSKELWTKNGLSYLASLIGEPLCMDGATSEKKRLDFAKVCVTI 72
           VP+W +++ V  E WT  GLS +AS +G PL  D  T  +KRL +A+VCV I
Sbjct: 240 VPVWVRLYNVPLEYWTIKGLSCVASAVGVPLHADHTTLLRKRLSYARVCVEI 291



 Score =  118 bits (295), Expect = 8e-25
 Identities = 59/172 (34%), Positives = 94/172 (54%), Gaps = 3/172 (1%)
 Frame = -3

Query: 578  STTTELNSCAPIFEDGAAVV--PQDIIDEGISEWKDTVVGYFLDKRLGFPFVKSTLERTW 405
            S+   ++   P   DG   V  P D+ ++G   WK T+VG+F+ ++L +P V S  +R W
Sbjct: 913  SSVRNMHFAPPTTTDGRVTVAPPLDVFEDGCEFWKSTLVGHFVGQKLPYPVVNSIAKRIW 972

Query: 404  KLKGTMEI-TTDRELFFIRFAMIEDKQMVLEGGPLFIAGKIFVIRPWSPEVEGQKSNINT 228
               G  E+ ++D   F   F  ++    VLE  P  +A +  V++ W P ++  K ++  
Sbjct: 973  SSYGLSEVLSSDNGFFIFNFDYVDHATNVLERAPWHMANRPLVLKRWQPNMQFLKDDLAR 1032

Query: 227  VPIWAKIFKVSKELWTKNGLSYLASLIGEPLCMDGATSEKKRLDFAKVCVTI 72
            VP+W +++ V  E WT  GLS +AS +G PL  D  T  +KRL +A+VCV I
Sbjct: 1033 VPVWVRLYNVPLEYWTIKGLSCVASAVGVPLHADHTTLLRKRLSYARVCVEI 1084


>ref|XP_002331734.1| predicted protein [Populus trichocarpa] gi|222874137|gb|EEF11268.1|
           predicted protein [Populus trichocarpa]
          Length = 557

 Score =  117 bits (293), Expect = 1e-24
 Identities = 56/157 (35%), Positives = 88/157 (56%), Gaps = 1/157 (0%)
 Frame = -3

Query: 539 EDGAAVVPQDIIDEGISEWKDTVVGYFLDKRLGFPFVKSTLERTWKLKGTMEI-TTDREL 363
           +D     P D+ ++G   WK T+VG+F+ ++L +P V S  +R W   G  E+ ++D   
Sbjct: 109 DDNEVAPPLDVFEDGCEFWKSTLVGHFVGQKLPYPVVNSIAKRIWSSYGLSEVLSSDNGF 168

Query: 362 FFIRFAMIEDKQMVLEGGPLFIAGKIFVIRPWSPEVEGQKSNINTVPIWAKIFKVSKELW 183
           F   F  ++    VLE  P  +A +  V++ W P ++  K ++  VP+W +++ V  E W
Sbjct: 169 FIFNFDFVDHATNVLERAPWHMANRPLVLKRWQPNMQFLKDDLARVPVWVRLYNVPLEYW 228

Query: 182 TKNGLSYLASLIGEPLCMDGATSEKKRLDFAKVCVTI 72
           T  GLS +AS IG PL  D  T  +KRL +A+VCV I
Sbjct: 229 TIKGLSCVASAIGVPLHADHTTLLRKRLSYARVCVEI 265


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