BLASTX nr result

ID: Coptis24_contig00027237 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027237
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526678.1| breast cancer type 2 susceptibility protein ...   156   1e-36
ref|XP_002264351.2| PREDICTED: uncharacterized protein LOC100241...   148   5e-34
emb|CBI18109.3| unnamed protein product [Vitis vinifera]              148   5e-34
gb|AAO42140.1| unknown protein [Arabidopsis thaliana]                 146   2e-33
ref|NP_195783.3| breast cancer 2 susceptibility protein [Arabido...   146   2e-33

>ref|XP_002526678.1| breast cancer type 2 susceptibility protein brca2, putative [Ricinus
            communis] gi|223533978|gb|EEF35700.1| breast cancer type
            2 susceptibility protein brca2, putative [Ricinus
            communis]
          Length = 1156

 Score =  156 bits (395), Expect = 1e-36
 Identities = 75/116 (64%), Positives = 97/116 (83%)
 Frame = -3

Query: 353  GGLVPKTLVGVSRIYPILYKERLIDGGSVVRSEMMENKMLELYNQKRSTIAEGIISEFQK 174
            GG VP+TLVGV+R+YP+LYKE+L DGGS+VRSE ME K ++LY+Q+ S + EGI+SEFQ+
Sbjct: 739  GGPVPQTLVGVTRLYPVLYKEKLCDGGSIVRSERMEAKAMQLYSQRHSAVVEGIVSEFQR 798

Query: 173  DVSSFYSKNESDSEEGAKIMKILENAAEPEMIMADMSTEQLTSVATYQGKQEAIKQ 6
            ++   +  N+SDSEEGAKI+KILE A+EPE+IMA+MS EQLTS A+YQ K EA KQ
Sbjct: 799  EMKGSHIYNDSDSEEGAKILKILETASEPEVIMAEMSPEQLTSFASYQAKLEATKQ 854


>ref|XP_002264351.2| PREDICTED: uncharacterized protein LOC100241398 [Vitis vinifera]
          Length = 1126

 Score =  148 bits (373), Expect = 5e-34
 Identities = 74/117 (63%), Positives = 94/117 (80%)
 Frame = -3

Query: 353  GGLVPKTLVGVSRIYPILYKERLIDGGSVVRSEMMENKMLELYNQKRSTIAEGIISEFQK 174
            GG VP+TLV V+RIYPILYKERL +GGS+VRS  ME KM++LYN + ST+ EGIISEFQ+
Sbjct: 730  GGPVPQTLVRVTRIYPILYKERLSNGGSIVRSVRMETKMMQLYNHRCSTVVEGIISEFQR 789

Query: 173  DVSSFYSKNESDSEEGAKIMKILENAAEPEMIMADMSTEQLTSVATYQGKQEAIKQS 3
                    N++DSEEGAKI +ILE+AAEPE++MA+M++EQL S  +YQ K EAI+QS
Sbjct: 790  GTRDSCINNDNDSEEGAKIFEILESAAEPEVLMAEMTSEQLASFTSYQAKLEAIRQS 846


>emb|CBI18109.3| unnamed protein product [Vitis vinifera]
          Length = 1134

 Score =  148 bits (373), Expect = 5e-34
 Identities = 74/117 (63%), Positives = 94/117 (80%)
 Frame = -3

Query: 353  GGLVPKTLVGVSRIYPILYKERLIDGGSVVRSEMMENKMLELYNQKRSTIAEGIISEFQK 174
            GG VP+TLV V+RIYPILYKERL +GGS+VRS  ME KM++LYN + ST+ EGIISEFQ+
Sbjct: 750  GGPVPQTLVRVTRIYPILYKERLSNGGSIVRSVRMETKMMQLYNHRCSTVVEGIISEFQR 809

Query: 173  DVSSFYSKNESDSEEGAKIMKILENAAEPEMIMADMSTEQLTSVATYQGKQEAIKQS 3
                    N++DSEEGAKI +ILE+AAEPE++MA+M++EQL S  +YQ K EAI+QS
Sbjct: 810  GTRDSCINNDNDSEEGAKIFEILESAAEPEVLMAEMTSEQLASFTSYQAKLEAIRQS 866


>gb|AAO42140.1| unknown protein [Arabidopsis thaliana]
          Length = 524

 Score =  146 bits (368), Expect = 2e-33
 Identities = 68/116 (58%), Positives = 96/116 (82%)
 Frame = -3

Query: 353 GGLVPKTLVGVSRIYPILYKERLIDGGSVVRSEMMENKMLELYNQKRSTIAEGIISEFQK 174
           GG VPKTL G++RIYPILYKERL +  S+VRSE +E+++++L+NQ+RS + EGI+ E+Q+
Sbjct: 136 GGPVPKTLAGITRIYPILYKERLGEKKSIVRSERIESRIIQLHNQRRSALVEGIMCEYQR 195

Query: 173 DVSSFYSKNESDSEEGAKIMKILENAAEPEMIMADMSTEQLTSVATYQGKQEAIKQ 6
            ++  +S+N++DSEEGAK+ K+LE AAEPE++MA+MS EQLTS  TY+ K EA KQ
Sbjct: 196 GINGVHSQNDTDSEEGAKVFKLLETAAEPELLMAEMSLEQLTSFTTYKAKFEAAKQ 251


>ref|NP_195783.3| breast cancer 2 susceptibility protein [Arabidopsis thaliana]
            gi|31335362|emb|CAD32572.1| breast cancer susceptibility
            protein 2b [Arabidopsis thaliana]
            gi|332002986|gb|AED90369.1| breast cancer 2
            susceptibility protein [Arabidopsis thaliana]
          Length = 1155

 Score =  146 bits (368), Expect = 2e-33
 Identities = 68/116 (58%), Positives = 96/116 (82%)
 Frame = -3

Query: 353  GGLVPKTLVGVSRIYPILYKERLIDGGSVVRSEMMENKMLELYNQKRSTIAEGIISEFQK 174
            GG VPKTL G++RIYPILYKERL +  S+VRSE +E+++++L+NQ+RS + EGI+ E+Q+
Sbjct: 767  GGPVPKTLAGITRIYPILYKERLGEKKSIVRSERIESRIIQLHNQRRSALVEGIMCEYQR 826

Query: 173  DVSSFYSKNESDSEEGAKIMKILENAAEPEMIMADMSTEQLTSVATYQGKQEAIKQ 6
             ++  +S+N++DSEEGAK+ K+LE AAEPE++MA+MS EQLTS  TY+ K EA KQ
Sbjct: 827  GINGVHSQNDTDSEEGAKVFKLLETAAEPELLMAEMSLEQLTSFTTYKAKFEAAKQ 882


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