BLASTX nr result

ID: Coptis24_contig00027230 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027230
         (651 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313567.1| predicted protein [Populus trichocarpa] gi|2...   160   3e-37
ref|XP_003545054.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-l...   159   6e-37
ref|XP_002263941.2| PREDICTED: protein FAR1-RELATED SEQUENCE 5-l...   158   7e-37
emb|CAN71534.1| hypothetical protein VITISV_018182 [Vitis vinifera]   158   7e-37
ref|XP_002276140.2| PREDICTED: protein FAR-RED IMPAIRED RESPONSE...   154   1e-35

>ref|XP_002313567.1| predicted protein [Populus trichocarpa] gi|222849975|gb|EEE87522.1|
           predicted protein [Populus trichocarpa]
          Length = 751

 Score =  160 bits (404), Expect = 3e-37
 Identities = 89/248 (35%), Positives = 126/248 (50%), Gaps = 32/248 (12%)
 Frame = +1

Query: 1   FCCSKEGHRRQRRESDDGTKVKDGVIVKVRRRNVKSIRVGCSAKLDVKRVSNSRWVIQKF 180
           F C+KEG R    +     ++K   ++          RVGC A L VK   + +WV+  F
Sbjct: 108 FVCAKEGFRNLNEKRTKDREIKRPRVIT---------RVGCKASLSVKMQDSGKWVVSGF 158

Query: 181 DEVHNHEYANQGEKHLLRSQRR-----GDITEVTMNKGL------------YGGSGE--- 300
              HNHE     + H LRS R+       + +     G+            YGG  +   
Sbjct: 159 VRGHNHELVPLDQVHCLRSHRQISGPAKTLVDTLQAAGMGPRRIMSALIKEYGGISKVGF 218

Query: 301 ------------RKKFERGDVKVVLDYFTEMKVENASFFYAVDISKDDQMLNFFWADARS 444
                       R+K   GD++++LDY  +M  EN +FFYA+    D    N FW+D R+
Sbjct: 219 TEVDCRNYMRNNRQKSMEGDIQLLLDYLRQMHTENPNFFYALQGGDDQFTGNVFWSDPRA 278

Query: 445 RMDFGYFGDVIYFSTSYGTVKYGRPFSPIFGLNHHLQTVLFGCVVLLNETEDSFVWLLET 624
           R ++ YFGD + F T+Y + +Y  PF+P+ G+NHH Q VLFGC  LLNETE SF+WL +T
Sbjct: 279 RANYSYFGDTVTFDTTYRSNRYRLPFAPLTGVNHHGQPVLFGCAFLLNETEASFIWLFQT 338

Query: 625 FLKAMSRH 648
           +L AMS H
Sbjct: 339 WLTAMSGH 346


>ref|XP_003545054.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Glycine max]
          Length = 777

 Score =  159 bits (401), Expect = 6e-37
 Identities = 90/246 (36%), Positives = 126/246 (51%), Gaps = 32/246 (13%)
 Frame = +1

Query: 1   FCCSKEGHRRQRRESDDGTKVKDGVIVKVRRRNVKSIRVGCSAKLDVKRVSNSRWVIQKF 180
           F C+KEG R    +     ++K       R R +   RVGC A L VK   + +W++  F
Sbjct: 101 FVCAKEGFRNLNEKRTKDREIK-------RPRTIT--RVGCKASLSVKMQDSGKWIVSGF 151

Query: 181 DEVHNHEYANQGEKHLLRSQRRGDITEVTMNKGL-----------------YGGSGE--- 300
              HNHE     + H LRS R+      T+   L                 YGG  +   
Sbjct: 152 VREHNHELVPPDQVHCLRSHRQISGAAKTLIDTLQAAGMGPRRIMSALIKEYGGISKVGF 211

Query: 301 ------------RKKFERGDVKVVLDYFTEMKVENASFFYAVDISKDDQMLNFFWADARS 444
                       R +   GD+++VLDY  +M  EN +FFYAV   +D  + N FWAD ++
Sbjct: 212 TEVDCRNYMRNNRLRSLEGDIQLVLDYLRQMHAENPNFFYAVQGDEDQSITNVFWADPKA 271

Query: 445 RMDFGYFGDVIYFSTSYGTVKYGRPFSPIFGLNHHLQTVLFGCVVLLNETEDSFVWLLET 624
           RM++ +FGD + F T+Y + +Y  PF+P  G+NHH Q VLFGC  L+NE+E SFVWL +T
Sbjct: 272 RMNYTFFGDTVTFDTTYRSNRYRLPFAPFTGVNHHGQPVLFGCAFLINESEASFVWLFKT 331

Query: 625 FLKAMS 642
           +L AMS
Sbjct: 332 WLMAMS 337


>ref|XP_002263941.2| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Vitis vinifera]
          Length = 773

 Score =  158 bits (400), Expect = 7e-37
 Identities = 92/246 (37%), Positives = 128/246 (52%), Gaps = 32/246 (13%)
 Frame = +1

Query: 1   FCCSKEGHRRQRRESDDGTKVKDGVIVKVRRRNVKSIRVGCSAKLDVKRVSNSRWVIQKF 180
           F C+KEG R  + +       +DG + + R       RVGC A L VK   +SRWV+  F
Sbjct: 112 FVCAKEGFRVDKEKPG-----RDGRVKRPRAET----RVGCKAMLVVKIQDSSRWVVSGF 162

Query: 181 DEVHNHEYANQGEKHLLRSQRR-----GDITEVTMNKGL------------YGG------ 291
            + HNHE     + H LRS R        + +     G+            YGG      
Sbjct: 163 VKEHNHELVPPDKVHCLRSHRHVSGAAKSLIDTLQGAGIGPSGIMSALIKEYGGISNVGF 222

Query: 292 ---------SGERKKFERGDVKVVLDYFTEMKVENASFFYAVDISKDDQMLNFFWADARS 444
                       R++   GD +++LDY   M+ EN +F YAV   +D  M N FWAD ++
Sbjct: 223 TERDCRNYMRSSRQRTLGGDTQLLLDYLRNMQAENPAFVYAVQGDEDQCMSNIFWADPKA 282

Query: 445 RMDFGYFGDVIYFSTSYGTVKYGRPFSPIFGLNHHLQTVLFGCVVLLNETEDSFVWLLET 624
           RM++ YFGD + F T+Y + +Y  PF+P  G+NHH Q VLFGC +L+NE+E SFVWL +T
Sbjct: 283 RMNYTYFGDTVTFDTTYRSNRYRLPFAPFTGVNHHGQPVLFGCALLINESEASFVWLFKT 342

Query: 625 FLKAMS 642
           +L AMS
Sbjct: 343 WLAAMS 348


>emb|CAN71534.1| hypothetical protein VITISV_018182 [Vitis vinifera]
          Length = 737

 Score =  158 bits (400), Expect = 7e-37
 Identities = 92/246 (37%), Positives = 128/246 (52%), Gaps = 32/246 (13%)
 Frame = +1

Query: 1   FCCSKEGHRRQRRESDDGTKVKDGVIVKVRRRNVKSIRVGCSAKLDVKRVSNSRWVIQKF 180
           F C+KEG R  + +       +DG + + R       RVGC A L VK   +SRWV+  F
Sbjct: 112 FVCAKEGFRVDKEKPG-----RDGRVKRPRAET----RVGCKAMLVVKIQDSSRWVVSGF 162

Query: 181 DEVHNHEYANQGEKHLLRSQRR-----GDITEVTMNKGL------------YGG------ 291
            + HNHE     + H LRS R        + +     G+            YGG      
Sbjct: 163 VKEHNHELVPPDKVHCLRSHRHVSGAAKSLIDTLQGAGIGPSGIMSALIKEYGGISNVGF 222

Query: 292 ---------SGERKKFERGDVKVVLDYFTEMKVENASFFYAVDISKDDQMLNFFWADARS 444
                       R++   GD +++LDY   M+ EN +F YAV   +D  M N FWAD ++
Sbjct: 223 TERDCRNYMRSSRQRTLGGDTQLLLDYLRNMQAENPAFVYAVQGDEDQCMSNIFWADPKA 282

Query: 445 RMDFGYFGDVIYFSTSYGTVKYGRPFSPIFGLNHHLQTVLFGCVVLLNETEDSFVWLLET 624
           RM++ YFGD + F T+Y + +Y  PF+P  G+NHH Q VLFGC +L+NE+E SFVWL +T
Sbjct: 283 RMNYTYFGDTVTFDTTYRSNRYRLPFAPFTGVNHHGQPVLFGCALLINESEASFVWLFKT 342

Query: 625 FLKAMS 642
           +L AMS
Sbjct: 343 WLAAMS 348


>ref|XP_002276140.2| PREDICTED: protein FAR-RED IMPAIRED RESPONSE 1-like [Vitis
           vinifera]
          Length = 885

 Score =  154 bits (390), Expect = 1e-35
 Identities = 80/223 (35%), Positives = 129/223 (57%), Gaps = 10/223 (4%)
 Frame = +1

Query: 1   FCCSKEGHRRQRRESDDGTKVK--DGVI-VKVRRR----NVKSIRVGCSAKLDVKRVSNS 159
           F C++ G++R+   ++    +   DG   + V+R+    N    +  C A + VKR  + 
Sbjct: 128 FVCTRYGNKRESSTAETTQPISSTDGTTSIPVKRKRGRINRSWSKTDCKACMHVKRRQDG 187

Query: 160 RWVIQKFDEVHNHEYANQGEKHLLRSQRRGDITEVTMNKGL---YGGSGERKKFERGDVK 330
           RW+I+ F + HNHE       +    +  G   +V   KG       SG+    E GD +
Sbjct: 188 RWIIRSFIKEHNHEIFPDQAYYF---REAGGYKKVENQKGSTINQFDSGQHLALEEGDAQ 244

Query: 331 VVLDYFTEMKVENASFFYAVDISKDDQMLNFFWADARSRMDFGYFGDVIYFSTSYGTVKY 510
           V+LD+F  M+ EN +FFYA+D+++D ++ N FW DAR R+D+G F DV++F T+Y   +Y
Sbjct: 245 VMLDHFMYMQDENPNFFYAIDLNEDQRLRNVFWVDARGRLDYGNFSDVVFFDTTYIKNEY 304

Query: 511 GRPFSPIFGLNHHLQTVLFGCVVLLNETEDSFVWLLETFLKAM 639
             PF+P  G+NHH Q VL GC ++ +ET+ + VWL+ ++L+AM
Sbjct: 305 KLPFAPFIGVNHHFQFVLLGCALIADETKSTLVWLMRSWLRAM 347


Top