BLASTX nr result

ID: Coptis24_contig00027216 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027216
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551189.1| PREDICTED: uncharacterized protein LOC100781...    75   6e-12
ref|XP_003519748.1| PREDICTED: uncharacterized protein LOC100797...    71   1e-10
ref|XP_002312513.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
ref|NP_001048013.1| Os02g0730400 [Oryza sativa Japonica Group] g...    66   3e-09
ref|XP_002521024.1| conserved hypothetical protein [Ricinus comm...    66   3e-09

>ref|XP_003551189.1| PREDICTED: uncharacterized protein LOC100781836 [Glycine max]
          Length = 493

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 42/65 (64%), Positives = 51/65 (78%), Gaps = 2/65 (3%)
 Frame = -3

Query: 281 NPYQQSSKYSVRPPLIPSEEEQEKQE-AFFVSLGKLILNTGAALVEIVAGLF-GFKRKSR 108
           +PYQ+  K SVRPPLIPSE E +KQE  FF SLGKL+ NTGA++VEI+ GLF  F+RKS 
Sbjct: 282 SPYQKPLK-SVRPPLIPSEYEPDKQEEGFFGSLGKLLANTGASMVEIIGGLFPSFRRKSL 340

Query: 107 SHQFQ 93
            +QFQ
Sbjct: 341 RYQFQ 345


>ref|XP_003519748.1| PREDICTED: uncharacterized protein LOC100797570 [Glycine max]
          Length = 507

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 37/65 (56%), Positives = 52/65 (80%), Gaps = 2/65 (3%)
 Frame = -3

Query: 281 NPYQQSSKYSVRPPLIPSEEEQEKQEAFFV-SLGKLILNTGAALVEIVAGLF-GFKRKSR 108
           +PYQ+  K SVRPPLIPSE+E +KQE  F+ S+GKL+ N GA++VEI+  LF GF++K +
Sbjct: 283 SPYQKPLK-SVRPPLIPSEDESDKQEESFIRSIGKLLTNAGASVVEIMGALFPGFRKKPQ 341

Query: 107 SHQFQ 93
           S++FQ
Sbjct: 342 SYEFQ 346


>ref|XP_002312513.1| predicted protein [Populus trichocarpa] gi|222852333|gb|EEE89880.1|
           predicted protein [Populus trichocarpa]
          Length = 494

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 35/66 (53%), Positives = 51/66 (77%), Gaps = 2/66 (3%)
 Frame = -3

Query: 278 PYQQSSKYSVRPPLIPSEEEQEK-QEAFFVSLGKLILNTGAALVEIVAGLF-GFKRKSRS 105
           PYQ+  K S+RPPLIP+E+EQEK +E  F SLGKL +NTGA+++EI  G+   F++K  S
Sbjct: 286 PYQKPIK-SIRPPLIPTEDEQEKHEEGLFGSLGKLFINTGASVMEIFGGIVPSFRKKPVS 344

Query: 104 HQFQHH 87
           +Q+Q++
Sbjct: 345 YQYQNY 350


>ref|NP_001048013.1| Os02g0730400 [Oryza sativa Japonica Group]
           gi|46390465|dbj|BAD15926.1| putative NHL
           repeat-containing protein [Oryza sativa Japonica Group]
           gi|46390861|dbj|BAD16365.1| putative NHL
           repeat-containing protein [Oryza sativa Japonica Group]
           gi|113537544|dbj|BAF09927.1| Os02g0730400 [Oryza sativa
           Japonica Group] gi|125541002|gb|EAY87397.1| hypothetical
           protein OsI_08804 [Oryza sativa Indica Group]
           gi|125583566|gb|EAZ24497.1| hypothetical protein
           OsJ_08258 [Oryza sativa Japonica Group]
           gi|215715228|dbj|BAG94979.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 508

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 34/72 (47%), Positives = 46/72 (63%), Gaps = 3/72 (4%)
 Frame = -3

Query: 287 NLNPYQQSSKYSVRPPLIPSEEEQEKQ---EAFFVSLGKLILNTGAALVEIVAGLFGFKR 117
           ++ PYQ+  K SVRPPLIP+E+E EKQ   E FF S+GKLI+   +++ EIV   F  K+
Sbjct: 292 SIPPYQKPLKQSVRPPLIPNEDESEKQEVEEGFFTSIGKLIVGAKSSVAEIVGAAFSRKK 351

Query: 116 KSRSHQFQHHCR 81
           +   HQ Q   R
Sbjct: 352 RLNIHQQQARVR 363


>ref|XP_002521024.1| conserved hypothetical protein [Ricinus communis]
           gi|223539861|gb|EEF41441.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 500

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 35/64 (54%), Positives = 49/64 (76%), Gaps = 2/64 (3%)
 Frame = -3

Query: 281 NPYQQSSKYSVRPPLIPSEEEQEK-QEAFFVSLGKLILNTGAALVEIVAGLF-GFKRKSR 108
           +PYQ+  + SVRPPLIP+E+EQEK +E FF SLGKL  N GA +VEI+ G+  GF++K  
Sbjct: 293 SPYQKPLR-SVRPPLIPTEDEQEKHEEGFFGSLGKLFANAGACVVEILGGIVPGFRKKPL 351

Query: 107 SHQF 96
           ++Q+
Sbjct: 352 NYQY 355


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