BLASTX nr result

ID: Coptis24_contig00027215 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027215
         (519 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631962.1| PREDICTED: uncharacterized protein LOC100855...    91   8e-17
emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]    91   8e-17
emb|CAN67322.1| hypothetical protein VITISV_004158 [Vitis vinifera]    89   5e-16
emb|CAN59949.1| hypothetical protein VITISV_043423 [Vitis vinifera]    87   1e-15
emb|CAN65808.1| hypothetical protein VITISV_033389 [Vitis vinifera]    87   1e-15

>ref|XP_003631962.1| PREDICTED: uncharacterized protein LOC100855226 [Vitis vinifera]
          Length = 1011

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 43/97 (44%), Positives = 63/97 (64%), Gaps = 1/97 (1%)
 Frame = -1

Query: 288 STNPMEPQTNHLAYIHHSNNPNAVLVTPLLDGDNYRTWIQATTMALSAKNKLGFVDGTME 109
           +T P E  +NH  + HHS+ P AVLV+  L  DNY TW+Q+  MAL+ KNK GFVDGT+ 
Sbjct: 21  TTEPWE-NSNHPLFFHHSDQPGAVLVSQPLMEDNYTTWVQSMGMALTIKNKKGFVDGTLN 79

Query: 108 QPI-DPRESQQWARCNDLISS*IINSTESHLRGSILY 1
           +P  +P E QQW RCN L+ + ++ +    +  S+++
Sbjct: 80  RPTHNPNEQQQWDRCNILVKTWLLGAISKEISNSVIH 116


>emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]
          Length = 1523

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 43/97 (44%), Positives = 63/97 (64%), Gaps = 1/97 (1%)
 Frame = -1

Query: 288 STNPMEPQTNHLAYIHHSNNPNAVLVTPLLDGDNYRTWIQATTMALSAKNKLGFVDGTME 109
           +T P E   NH  ++HHS+ P AVLV+  L  DNY TW+Q+  MAL+ KNK GFVDGT+ 
Sbjct: 21  TTEPWE-NFNHPLFLHHSDQPGAVLVSQPLMEDNYTTWVQSMDMALTIKNKKGFVDGTLN 79

Query: 108 QPI-DPRESQQWARCNDLISS*IINSTESHLRGSILY 1
           +P  +P E QQW RCN L+ + ++ +    +  S+++
Sbjct: 80  RPTHNPNEQQQWDRCNILVKTWLLGAISKEISNSVIH 116


>emb|CAN67322.1| hypothetical protein VITISV_004158 [Vitis vinifera]
          Length = 1171

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 45/135 (33%), Positives = 78/135 (57%), Gaps = 3/135 (2%)
 Frame = -1

Query: 396 MVSERTQDP*PMSTSPSTEFNTSASTGSIFSSPVTLSTNPMEPQTNHLAYIHHSNNPNAV 217
           MV ER   P  +S   S++     ++         L ++  +   ++  + HHS++P  V
Sbjct: 1   MVDERNPTPSGISKPDSSKTEKQVNSS-------VLPSDASKSDLSNPYFTHHSDHPGLV 53

Query: 216 LVTPLLDGDNYRTWIQATTMALSAKNKLGFVDGTMEQPID---PRESQQWARCNDLISS* 46
           L++  L+GDNY  W +A T+AL+AKNKLGFV+GT++ P++   P +   W+RCND++ S 
Sbjct: 54  LISKPLNGDNYSAWRKAMTLALNAKNKLGFVNGTIKAPLEETHPDDYATWSRCNDMVHSW 113

Query: 45  IINSTESHLRGSILY 1
           I+N+    +   ++Y
Sbjct: 114 IVNTLNPEISDFVIY 128


>emb|CAN59949.1| hypothetical protein VITISV_043423 [Vitis vinifera]
          Length = 1059

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 40/86 (46%), Positives = 58/86 (67%), Gaps = 3/86 (3%)
 Frame = -1

Query: 249 YIHHSNNPNAVLVTPLLDGDNYRTWIQATTMALSAKNKLGFVDGTMEQPI---DPRESQQ 79
           ++HHS++P  VLV+  L+GDNY TW +A T++L+AK+KLGF+DGT   P     P E   
Sbjct: 19  FLHHSDHPGMVLVSKPLNGDNYSTWCRAMTISLNAKSKLGFIDGTTTMPSATDKPBEHAS 78

Query: 78  WARCNDLISS*IINSTESHLRGSILY 1
           W +CND+I S I+NS    L  S+++
Sbjct: 79  WKKCNDMILSWILNSLSQDLADSVIF 104


>emb|CAN65808.1| hypothetical protein VITISV_033389 [Vitis vinifera]
          Length = 1279

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 40/86 (46%), Positives = 58/86 (67%), Gaps = 3/86 (3%)
 Frame = -1

Query: 249 YIHHSNNPNAVLVTPLLDGDNYRTWIQATTMALSAKNKLGFVDGTMEQPI---DPRESQQ 79
           ++HHS++P  VLV+  L+GDNY TW +A T++L+AK+KLGF+DGT   P     P E   
Sbjct: 19  FLHHSDHPGMVLVSKPLNGDNYSTWCRAMTISLNAKSKLGFIDGTTTMPSATDKPDEHAS 78

Query: 78  WARCNDLISS*IINSTESHLRGSILY 1
           W +CND+I S I+NS    L  S+++
Sbjct: 79  WKKCNDMILSWILNSLSQDLADSVIF 104


Top