BLASTX nr result
ID: Coptis24_contig00027212
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00027212 (391 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002282625.1| PREDICTED: transcription factor bHLH106 [Vit... 119 3e-25 ref|XP_002517323.1| DNA binding protein, putative [Ricinus commu... 107 8e-22 gb|ABK93020.1| unknown [Populus trichocarpa] 101 5e-20 gb|AFK46671.1| unknown [Medicago truncatula] 93 3e-17 ref|XP_003520293.1| PREDICTED: transcription factor bHLH106-like... 92 6e-17 >ref|XP_002282625.1| PREDICTED: transcription factor bHLH106 [Vitis vinifera] gi|297741653|emb|CBI32785.3| unnamed protein product [Vitis vinifera] Length = 239 Score = 119 bits (298), Expect = 3e-25 Identities = 63/106 (59%), Positives = 77/106 (72%) Frame = +2 Query: 74 MQPENFPEISDFYGLVTGNNGMEHEPYGSYGFPTSYDIASDVPSFCGSSYYPFESSDITD 253 MQPEN PE S+F + GN + G YGFP + D + + SFC SS+YP E S I D Sbjct: 1 MQPENTPEGSEFCRFLAGNVLSD---VGWYGFPGNCDFPA-IQSFCSSSFYPSEVSGIAD 56 Query: 254 LPHAKALAASKNHREAEKRRRERINSHLNRLRGLLPCNSKTDKASL 391 +P ++AL AS NH+EAEKRRRERINSHL++LR LLPC+SKTDKASL Sbjct: 57 VPQSRALTASINHKEAEKRRRERINSHLDKLRSLLPCSSKTDKASL 102 >ref|XP_002517323.1| DNA binding protein, putative [Ricinus communis] gi|223543586|gb|EEF45116.1| DNA binding protein, putative [Ricinus communis] Length = 237 Score = 107 bits (268), Expect = 8e-22 Identities = 63/109 (57%), Positives = 71/109 (65%), Gaps = 3/109 (2%) Frame = +2 Query: 74 MQPENFPEISDFYGLVTGNNGMEHEPYGSYGFPTSYDIASDVPSFCGSSY--YPFESSDI 247 MQP+N PEIS Y + N GS G P + S SSY YP E S I Sbjct: 1 MQPDNSPEISQLYRFLAENGVFN---VGSCGLPAMQSLCSS----SSSSYHNYPLEGSVI 53 Query: 248 TDL-PHAKALAASKNHREAEKRRRERINSHLNRLRGLLPCNSKTDKASL 391 TD+ P +ALAA KNH+EAEKRRRERINSHL++LRGLLPCNSKTDKASL Sbjct: 54 TDMTPQDRALAALKNHKEAEKRRRERINSHLDKLRGLLPCNSKTDKASL 102 >gb|ABK93020.1| unknown [Populus trichocarpa] Length = 241 Score = 101 bits (252), Expect = 5e-20 Identities = 61/109 (55%), Positives = 75/109 (68%), Gaps = 3/109 (2%) Frame = +2 Query: 74 MQPENFPEISDFYGLVTGNNGMEHEPYGSYGFPTS--YDIASDVPSFCGSSYYPFESSDI 247 MQPEN E S Y + NGM + G+YGFP + + + + ++ Y FESS I Sbjct: 1 MQPENCSENSQLYRFLA-ENGMIN--VGAYGFPGAAMQTLCTSSSTSYHNNNYQFESSVI 57 Query: 248 TDL-PHAKALAASKNHREAEKRRRERINSHLNRLRGLLPCNSKTDKASL 391 TD+ P +ALAA KNH+EAEKRRRERINSHL++LRGLL CNSKTDKASL Sbjct: 58 TDMTPQDRALAALKNHKEAEKRRRERINSHLDKLRGLLLCNSKTDKASL 106 >gb|AFK46671.1| unknown [Medicago truncatula] Length = 213 Score = 92.8 bits (229), Expect = 3e-17 Identities = 50/71 (70%), Positives = 55/71 (77%), Gaps = 8/71 (11%) Frame = +2 Query: 203 SFCGSS------YYPFESSDITDLPHA--KALAASKNHREAEKRRRERINSHLNRLRGLL 358 SFC SS Y+PFE S+ITD P +ALAA KNH+EAEKRRRERINSHL+ LR LL Sbjct: 5 SFCSSSDNNNNYYHPFEVSEITDTPSQQDRALAALKNHKEAEKRRRERINSHLDHLRTLL 64 Query: 359 PCNSKTDKASL 391 PCNSKTDKASL Sbjct: 65 PCNSKTDKASL 75 >ref|XP_003520293.1| PREDICTED: transcription factor bHLH106-like [Glycine max] Length = 246 Score = 91.7 bits (226), Expect = 6e-17 Identities = 55/102 (53%), Positives = 66/102 (64%), Gaps = 3/102 (2%) Frame = +2 Query: 95 EISDFYGLVTGNNGMEHEPYGSYGFPTSYDIASDVPSFCGS-SYYPFESSDITDLP--HA 265 E S+ + +T N SYG P + ++ SF GS SYYP E+S P Sbjct: 2 ENSELFQFLTNTNDAFFNT-ASYGLPAAPAASTMQHSFSGSFSYYPLEASHDHHAPSHED 60 Query: 266 KALAASKNHREAEKRRRERINSHLNRLRGLLPCNSKTDKASL 391 KALAA +NH+EAEKRRRERINSHL++LR LLPCNSKTDKASL Sbjct: 61 KALAALRNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASL 102