BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027212
         (391 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282625.1| PREDICTED: transcription factor bHLH106 [Vit...   119   3e-25
ref|XP_002517323.1| DNA binding protein, putative [Ricinus commu...   107   8e-22
gb|ABK93020.1| unknown [Populus trichocarpa]                          101   5e-20
gb|AFK46671.1| unknown [Medicago truncatula]                           93   3e-17
ref|XP_003520293.1| PREDICTED: transcription factor bHLH106-like...    92   6e-17

>ref|XP_002282625.1| PREDICTED: transcription factor bHLH106 [Vitis vinifera]
           gi|297741653|emb|CBI32785.3| unnamed protein product
           [Vitis vinifera]
          Length = 239

 Score =  119 bits (298), Expect = 3e-25
 Identities = 63/106 (59%), Positives = 77/106 (72%)
 Frame = +2

Query: 74  MQPENFPEISDFYGLVTGNNGMEHEPYGSYGFPTSYDIASDVPSFCGSSYYPFESSDITD 253
           MQPEN PE S+F   + GN   +    G YGFP + D  + + SFC SS+YP E S I D
Sbjct: 1   MQPENTPEGSEFCRFLAGNVLSD---VGWYGFPGNCDFPA-IQSFCSSSFYPSEVSGIAD 56

Query: 254 LPHAKALAASKNHREAEKRRRERINSHLNRLRGLLPCNSKTDKASL 391
           +P ++AL AS NH+EAEKRRRERINSHL++LR LLPC+SKTDKASL
Sbjct: 57  VPQSRALTASINHKEAEKRRRERINSHLDKLRSLLPCSSKTDKASL 102


>ref|XP_002517323.1| DNA binding protein, putative [Ricinus communis]
           gi|223543586|gb|EEF45116.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 237

 Score =  107 bits (268), Expect = 8e-22
 Identities = 63/109 (57%), Positives = 71/109 (65%), Gaps = 3/109 (2%)
 Frame = +2

Query: 74  MQPENFPEISDFYGLVTGNNGMEHEPYGSYGFPTSYDIASDVPSFCGSSY--YPFESSDI 247
           MQP+N PEIS  Y  +  N        GS G P    + S       SSY  YP E S I
Sbjct: 1   MQPDNSPEISQLYRFLAENGVFN---VGSCGLPAMQSLCSS----SSSSYHNYPLEGSVI 53

Query: 248 TDL-PHAKALAASKNHREAEKRRRERINSHLNRLRGLLPCNSKTDKASL 391
           TD+ P  +ALAA KNH+EAEKRRRERINSHL++LRGLLPCNSKTDKASL
Sbjct: 54  TDMTPQDRALAALKNHKEAEKRRRERINSHLDKLRGLLPCNSKTDKASL 102


>gb|ABK93020.1| unknown [Populus trichocarpa]
          Length = 241

 Score =  101 bits (252), Expect = 5e-20
 Identities = 61/109 (55%), Positives = 75/109 (68%), Gaps = 3/109 (2%)
 Frame = +2

Query: 74  MQPENFPEISDFYGLVTGNNGMEHEPYGSYGFPTS--YDIASDVPSFCGSSYYPFESSDI 247
           MQPEN  E S  Y  +   NGM +   G+YGFP +    + +   +   ++ Y FESS I
Sbjct: 1   MQPENCSENSQLYRFLA-ENGMIN--VGAYGFPGAAMQTLCTSSSTSYHNNNYQFESSVI 57

Query: 248 TDL-PHAKALAASKNHREAEKRRRERINSHLNRLRGLLPCNSKTDKASL 391
           TD+ P  +ALAA KNH+EAEKRRRERINSHL++LRGLL CNSKTDKASL
Sbjct: 58  TDMTPQDRALAALKNHKEAEKRRRERINSHLDKLRGLLLCNSKTDKASL 106


>gb|AFK46671.1| unknown [Medicago truncatula]
          Length = 213

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 50/71 (70%), Positives = 55/71 (77%), Gaps = 8/71 (11%)
 Frame = +2

Query: 203 SFCGSS------YYPFESSDITDLPHA--KALAASKNHREAEKRRRERINSHLNRLRGLL 358
           SFC SS      Y+PFE S+ITD P    +ALAA KNH+EAEKRRRERINSHL+ LR LL
Sbjct: 5   SFCSSSDNNNNYYHPFEVSEITDTPSQQDRALAALKNHKEAEKRRRERINSHLDHLRTLL 64

Query: 359 PCNSKTDKASL 391
           PCNSKTDKASL
Sbjct: 65  PCNSKTDKASL 75


>ref|XP_003520293.1| PREDICTED: transcription factor bHLH106-like [Glycine max]
          Length = 246

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 55/102 (53%), Positives = 66/102 (64%), Gaps = 3/102 (2%)
 Frame = +2

Query: 95  EISDFYGLVTGNNGMEHEPYGSYGFPTSYDIASDVPSFCGS-SYYPFESSDITDLP--HA 265
           E S+ +  +T  N        SYG P +   ++   SF GS SYYP E+S     P    
Sbjct: 2   ENSELFQFLTNTNDAFFNT-ASYGLPAAPAASTMQHSFSGSFSYYPLEASHDHHAPSHED 60

Query: 266 KALAASKNHREAEKRRRERINSHLNRLRGLLPCNSKTDKASL 391
           KALAA +NH+EAEKRRRERINSHL++LR LLPCNSKTDKASL
Sbjct: 61  KALAALRNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASL 102