BLASTX nr result

ID: Coptis24_contig00027211 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027211
         (941 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147114.1| PREDICTED: mitochondrial substrate carrier f...   286   5e-75
ref|XP_003553860.1| PREDICTED: mitochondrial substrate carrier f...   281   2e-73
ref|XP_003533095.1| PREDICTED: mitochondrial aspartate-glutamate...   281   2e-73
emb|CBI26982.3| unnamed protein product [Vitis vinifera]              278   2e-72
gb|AFK34832.1| unknown [Lotus japonicus]                              276   5e-72

>ref|XP_004147114.1| PREDICTED: mitochondrial substrate carrier family protein W-like
           [Cucumis sativus] gi|449520569|ref|XP_004167306.1|
           PREDICTED: mitochondrial substrate carrier family
           protein W-like [Cucumis sativus]
          Length = 371

 Score =  286 bits (732), Expect = 5e-75
 Identities = 149/233 (63%), Positives = 168/233 (72%)
 Frame = +1

Query: 1   VYFTVYEQLKTILKSHGNRDGQLXXXXXXXXXXXXXXXXXXXXXPLWVVKTRLQTQGMRS 180
           VYFTVYE LK +L S G+   QL                     PLWVVKTRLQTQGMR 
Sbjct: 91  VYFTVYEHLKGLLHSDGDDGHQLSFGANMLAAAGAGASTAIATNPLWVVKTRLQTQGMRP 150

Query: 181 GVVPYTSIFSALTRIMHEEGIRGLYSGLLPSLAGVSHVAIQFPMYEKTKSYIAIRDGTTV 360
           GVVPYT + SA TRI+ EEGIRGLYSG++PSL G+SHVAIQFP YE+ KSYIA R+ TTV
Sbjct: 151 GVVPYTGMVSAFTRIVREEGIRGLYSGIIPSLVGISHVAIQFPAYERLKSYIAKRENTTV 210

Query: 361 DKLNAGQVAIASSISKLFASTMTYPHEVVRSKLQEQGQCRNPESHYEGVGDCIRKILRKE 540
           DKL+ G +AIASS+SK+ AS MTYPHEVVRS+LQEQGQ RN    Y GV DCI+K+ RKE
Sbjct: 211 DKLSPGHLAIASSLSKVTASVMTYPHEVVRSRLQEQGQARNIAPQYSGVMDCIKKVFRKE 270

Query: 541 GVSGFYRGCATNLLRTMPSTVITFTSYEMIHRLLKRLTS*AELYMSPIHYSNN 699
           GV GFYRGCATNLLRT PS VITFTSYEMIHR L R+    E   S  H ++N
Sbjct: 271 GVPGFYRGCATNLLRTTPSAVITFTSYEMIHRFLLRVIPSGEDKYSETHPNSN 323



 Score = 82.8 bits (203), Expect = 1e-13
 Identities = 60/186 (32%), Positives = 97/186 (52%), Gaps = 1/186 (0%)
 Frame = +1

Query: 133 PLWVVKTRLQTQGMRSGVVPYTSIFSALTRIMHEEGIRGLYSGLLPSL-AGVSHVAIQFP 309
           PL V+KTRLQ  G+ SG    + I ++L  IM  EG RG+Y GL P++ A + + A+ F 
Sbjct: 35  PLDVIKTRLQVHGLPSGQSGGSIIITSLQSIMRSEGFRGMYRGLSPTIVALLPNWAVYFT 94

Query: 310 MYEKTKSYIAIRDGTTVDKLNAGQVAIASSISKLFASTMTYPHEVVRSKLQEQGQCRNPE 489
           +YE  K  +   DG    +L+ G   +A++ +    +  T P  VV+++LQ QG  R   
Sbjct: 95  VYEHLKGLLH-SDGDDGHQLSFGANMLAAAGAGASTAIATNPLWVVKTRLQTQGM-RPGV 152

Query: 490 SHYEGVGDCIRKILRKEGVSGFYRGCATNLLRTMPSTVITFTSYEMIHRLLKRLTS*AEL 669
             Y G+     +I+R+EG+ G Y G   +L+  +    I F +YE +   + +  +    
Sbjct: 153 VPYTGMVSAFTRIVREEGIRGLYSGIIPSLV-GISHVAIQFPAYERLKSYIAKRENTTVD 211

Query: 670 YMSPIH 687
            +SP H
Sbjct: 212 KLSPGH 217


>ref|XP_003553860.1| PREDICTED: mitochondrial substrate carrier family protein W-like
           [Glycine max]
          Length = 363

 Score =  281 bits (719), Expect = 2e-73
 Identities = 148/234 (63%), Positives = 170/234 (72%), Gaps = 2/234 (0%)
 Frame = +1

Query: 1   VYFTVYEQLKTILKSHGNRDG--QLXXXXXXXXXXXXXXXXXXXXXPLWVVKTRLQTQGM 174
           VYFT YEQLK +L+S   RDG  +L                     PLWVVKTRLQTQGM
Sbjct: 92  VYFTSYEQLKGLLRS---RDGCNELTTIGSIIAAAGAGAATAISTNPLWVVKTRLQTQGM 148

Query: 175 RSGVVPYTSIFSALTRIMHEEGIRGLYSGLLPSLAGVSHVAIQFPMYEKTKSYIAIRDGT 354
           R  VVPY S+ SALTRI HEEGIRGLYSG++PSLAGVSHVAIQFP YEK KSYIA +D T
Sbjct: 149 RPDVVPYKSVLSALTRITHEEGIRGLYSGIVPSLAGVSHVAIQFPAYEKIKSYIAEKDNT 208

Query: 355 TVDKLNAGQVAIASSISKLFASTMTYPHEVVRSKLQEQGQCRNPESHYEGVGDCIRKILR 534
           TVDKL  G VA+ASSISK+FAS MTYPHEV+RS+LQEQGQ +N    Y GV DC +K+ +
Sbjct: 209 TVDKLTPGSVAVASSISKVFASVMTYPHEVIRSRLQEQGQAKNIGVQYAGVIDCTKKVFQ 268

Query: 535 KEGVSGFYRGCATNLLRTMPSTVITFTSYEMIHRLLKRLTS*AELYMSPIHYSN 696
           KEG+ GFYRGCATNL RT PS VITFTSYEMIHR L+R+    + Y+  +  +N
Sbjct: 269 KEGIPGFYRGCATNLFRTTPSAVITFTSYEMIHRFLERVVPQDKGYLHGLSKAN 322



 Score = 74.3 bits (181), Expect = 4e-11
 Identities = 56/167 (33%), Positives = 87/167 (52%), Gaps = 1/167 (0%)
 Frame = +1

Query: 133 PLWVVKTRLQTQGMRSGVVPYTSIFSALTRIMHEEGIRGLYSGLLPSL-AGVSHVAIQFP 309
           PL V+KTRLQ  G+  G    + I ++L  I+  EG RG+Y GL P++ A + + A+ F 
Sbjct: 37  PLDVIKTRLQVHGLPHGQKG-SIIITSLQNIVRNEGFRGMYRGLSPTIVALLPNWAVYFT 95

Query: 310 MYEKTKSYIAIRDGTTVDKLNAGQVAIASSISKLFASTMTYPHEVVRSKLQEQGQCRNPE 489
            YE+ K  +  RDG   ++L      IA++ +    +  T P  VV+++LQ QG  R   
Sbjct: 96  SYEQLKGLLRSRDG--CNELTTIGSIIAAAGAGAATAISTNPLWVVKTRLQTQGM-RPDV 152

Query: 490 SHYEGVGDCIRKILRKEGVSGFYRGCATNLLRTMPSTVITFTSYEMI 630
             Y+ V   + +I  +EG+ G Y G   + L  +    I F +YE I
Sbjct: 153 VPYKSVLSALTRITHEEGIRGLYSGIVPS-LAGVSHVAIQFPAYEKI 198


>ref|XP_003533095.1| PREDICTED: mitochondrial aspartate-glutamate transporter AGC1-like
           [Glycine max]
          Length = 581

 Score =  281 bits (719), Expect = 2e-73
 Identities = 145/217 (66%), Positives = 163/217 (75%)
 Frame = +1

Query: 1   VYFTVYEQLKTILKSHGNRDGQLXXXXXXXXXXXXXXXXXXXXXPLWVVKTRLQTQGMRS 180
           VYFT YEQLK +L+S    D +L                     PLWVVKTRLQTQGMR 
Sbjct: 308 VYFTSYEQLKGLLRSRDGCD-ELTTIGNIIAAAGAGAATAISTNPLWVVKTRLQTQGMRP 366

Query: 181 GVVPYTSIFSALTRIMHEEGIRGLYSGLLPSLAGVSHVAIQFPMYEKTKSYIAIRDGTTV 360
            VVPY S+ SALTRI HEEGIRGLYSG++PSLAGVSHVAIQFP YEK KSY+A +D TTV
Sbjct: 367 DVVPYKSVLSALTRITHEEGIRGLYSGIVPSLAGVSHVAIQFPAYEKIKSYMAEKDNTTV 426

Query: 361 DKLNAGQVAIASSISKLFASTMTYPHEVVRSKLQEQGQCRNPESHYEGVGDCIRKILRKE 540
           DKL  G VAIASSISK+FAS MTYPHEV+RS+LQEQGQ +N    Y GV DC +K+ +KE
Sbjct: 427 DKLTPGSVAIASSISKVFASVMTYPHEVIRSRLQEQGQAKNIGVQYTGVIDCTKKVFQKE 486

Query: 541 GVSGFYRGCATNLLRTMPSTVITFTSYEMIHRLLKRL 651
           G+ GFYRGCATNLLRT PS VITFTSYEMIHR L+R+
Sbjct: 487 GIPGFYRGCATNLLRTTPSAVITFTSYEMIHRFLERV 523



 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 57/167 (34%), Positives = 87/167 (52%), Gaps = 1/167 (0%)
 Frame = +1

Query: 133 PLWVVKTRLQTQGMRSGVVPYTSIFSALTRIMHEEGIRGLYSGLLPSL-AGVSHVAIQFP 309
           PL V+KTRLQ  G+  G    + I ++L  I+  EG RG+Y GL P++ A + + A+ F 
Sbjct: 253 PLDVIKTRLQVHGLPHGQKG-SVIITSLQNIVRNEGFRGMYRGLSPTIVALLPNWAVYFT 311

Query: 310 MYEKTKSYIAIRDGTTVDKLNAGQVAIASSISKLFASTMTYPHEVVRSKLQEQGQCRNPE 489
            YE+ K  +  RDG   D+L      IA++ +    +  T P  VV+++LQ QG  R   
Sbjct: 312 SYEQLKGLLRSRDG--CDELTTIGNIIAAAGAGAATAISTNPLWVVKTRLQTQGM-RPDV 368

Query: 490 SHYEGVGDCIRKILRKEGVSGFYRGCATNLLRTMPSTVITFTSYEMI 630
             Y+ V   + +I  +EG+ G Y G   + L  +    I F +YE I
Sbjct: 369 VPYKSVLSALTRITHEEGIRGLYSGIVPS-LAGVSHVAIQFPAYEKI 414


>emb|CBI26982.3| unnamed protein product [Vitis vinifera]
          Length = 373

 Score =  278 bits (710), Expect = 2e-72
 Identities = 142/217 (65%), Positives = 158/217 (72%)
 Frame = +1

Query: 1   VYFTVYEQLKTILKSHGNRDGQLXXXXXXXXXXXXXXXXXXXXXPLWVVKTRLQTQGMRS 180
           VYFTVY++LK +L SH +   QL                     PLWVVKTRLQTQ MR 
Sbjct: 95  VYFTVYQKLKDVLHSHVDSSSQLTIGANVIAASGAGAATAITTNPLWVVKTRLQTQTMRP 154

Query: 181 GVVPYTSIFSALTRIMHEEGIRGLYSGLLPSLAGVSHVAIQFPMYEKTKSYIAIRDGTTV 360
            VVPY  IFSAL RI  EEGIRGLYSGLLPSLAG++HVAIQFP YE+ KSY+A    TTV
Sbjct: 155 NVVPYKGIFSALKRIAQEEGIRGLYSGLLPSLAGITHVAIQFPAYEQMKSYLAKMGDTTV 214

Query: 361 DKLNAGQVAIASSISKLFASTMTYPHEVVRSKLQEQGQCRNPESHYEGVGDCIRKILRKE 540
           D+L  G  AIASS SK+ AS MTYPHEV+RS+LQEQGQ RN E HY GV DCI K+ RKE
Sbjct: 215 DELGPGNFAIASSFSKVLASVMTYPHEVIRSRLQEQGQVRNSEKHYSGVIDCIEKVYRKE 274

Query: 541 GVSGFYRGCATNLLRTMPSTVITFTSYEMIHRLLKRL 651
           G+ GFYRGCATNLLRT PS VITFTS+EMIHR L+RL
Sbjct: 275 GLPGFYRGCATNLLRTTPSAVITFTSFEMIHRFLQRL 311



 Score = 74.7 bits (182), Expect = 3e-11
 Identities = 55/177 (31%), Positives = 94/177 (53%), Gaps = 4/177 (2%)
 Frame = +1

Query: 133 PLWVVKTRLQTQGM---RSGVVPYTSIFSALTRIMHEEGIRGLYSGLLPS-LAGVSHVAI 300
           PL V+KTRLQ  G+   R   V  + I ++L  I+  EG++G+Y GL P+ LA + + A+
Sbjct: 36  PLDVIKTRLQVHGLPEVRHSGVRGSVIITSLENIIRTEGLKGMYRGLSPTILALLPNWAV 95

Query: 301 QFPMYEKTKSYIAIRDGTTVDKLNAGQVAIASSISKLFASTMTYPHEVVRSKLQEQGQCR 480
            F +Y+K K  +     ++  +L  G   IA+S +    +  T P  VV+++LQ Q    
Sbjct: 96  YFTVYQKLKDVLHSHVDSS-SQLTIGANVIAASGAGAATAITTNPLWVVKTRLQTQTMRP 154

Query: 481 NPESHYEGVGDCIRKILRKEGVSGFYRGCATNLLRTMPSTVITFTSYEMIHRLLKRL 651
           N    Y+G+   +++I ++EG+ G Y G   + L  +    I F +YE +   L ++
Sbjct: 155 NVVP-YKGIFSALKRIAQEEGIRGLYSGLLPS-LAGITHVAIQFPAYEQMKSYLAKM 209


>gb|AFK34832.1| unknown [Lotus japonicus]
          Length = 277

 Score =  276 bits (706), Expect = 5e-72
 Identities = 145/218 (66%), Positives = 163/218 (74%), Gaps = 2/218 (0%)
 Frame = +1

Query: 1   VYFTVYEQLKTILKSHGNRDG--QLXXXXXXXXXXXXXXXXXXXXXPLWVVKTRLQTQGM 174
           VYFTVY+QLK  L+S   RDG  +L                     PLWVVKTRLQTQGM
Sbjct: 18  VYFTVYDQLKGRLRS---RDGCNELTTIGNIIAAAGAGVATAISTNPLWVVKTRLQTQGM 74

Query: 175 RSGVVPYTSIFSALTRIMHEEGIRGLYSGLLPSLAGVSHVAIQFPMYEKTKSYIAIRDGT 354
           RS VVPY S+ SALTRI HEEG+RGLYSG+LPSLAGVSHVAIQFP YEK K Y+A +D T
Sbjct: 75  RSDVVPYKSVLSALTRIAHEEGVRGLYSGILPSLAGVSHVAIQFPAYEKIKLYMAEKDNT 134

Query: 355 TVDKLNAGQVAIASSISKLFASTMTYPHEVVRSKLQEQGQCRNPESHYEGVGDCIRKILR 534
           TVDKL+ G VAIASSISK+ AS +TYPHEV+RS+LQEQG  +N   HY GV DC +K+ +
Sbjct: 135 TVDKLSPGNVAIASSISKITASLLTYPHEVIRSRLQEQGIAKNNGVHYAGVIDCTKKVFQ 194

Query: 535 KEGVSGFYRGCATNLLRTMPSTVITFTSYEMIHRLLKR 648
           KEG+ GFYRGCATNLLRT PS VITFTSYEMIHR L R
Sbjct: 195 KEGIRGFYRGCATNLLRTTPSAVITFTSYEMIHRFLDR 232


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