BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027210
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_398917.1| hypothetical protein NitoCp121 [Nicotiana tomen...    74   2e-24
ref|YP_001109552.1| hypothetical protein Poptr_cp074 [Populus tr...    73   1e-23
ref|XP_002319333.1| predicted protein [Populus trichocarpa] gi|2...    72   4e-23
ref|NP_054982.1| hypothetical protein SpolCp149 [Spinacia olerac...    68   4e-22
dbj|BAF50334.1| hypothetical protein [Crucihimalaya wallichii] g...    69   2e-20

>ref|YP_398917.1| hypothetical protein NitoCp121 [Nicotiana tomentosiformis]
           gi|81301638|ref|YP_398933.1| hypothetical protein
           NitoCp122 [Nicotiana tomentosiformis]
           gi|351653934|ref|YP_004891660.1| unnamed protein product
           (chloroplast) [Nicotiana undulata]
           gi|351653949|ref|YP_004891676.1| unnamed protein product
           (chloroplast) [Nicotiana undulata]
           gi|76559646|emb|CAJ32484.1| hypothetical protein
           [Nicotiana tabacum] gi|76559648|emb|CAJ32486.1|
           hypothetical protein [Nicotiana tabacum]
           gi|77799619|dbj|BAE46708.1| hypothetical protein
           [Nicotiana sylvestris] gi|77799635|dbj|BAE46724.1|
           hypothetical protein [Nicotiana sylvestris]
           gi|80750981|dbj|BAE48057.1| hypothetical protein
           [Nicotiana tomentosiformis] gi|80750997|dbj|BAE48073.1|
           hypothetical protein [Nicotiana tomentosiformis]
           gi|347453960|gb|AEO95618.1| hypothetical protein
           (chloroplast) [Nicotiana undulata]
           gi|347453975|gb|AEO95633.1| hypothetical protein
           (chloroplast) [Nicotiana undulata]
           gi|347454070|gb|AEO95727.1| hypothetical protein
           [synthetic construct] gi|347454085|gb|AEO95742.1|
           hypothetical protein [synthetic construct]
          Length = 71

 Score = 73.6 bits (179), Expect(2) = 2e-24
 Identities = 38/42 (90%), Positives = 38/42 (90%)
 Frame = -3

Query: 226 M*AGLKKDPRVSRVGPGGSLNAFFFLLIGVISQRLAMARKKG 101
           M AGLKKD RVSRVGPGGSLNAFFFLLIGVISQRLA  RKKG
Sbjct: 1   MGAGLKKDLRVSRVGPGGSLNAFFFLLIGVISQRLARVRKKG 42



 Score = 63.9 bits (154), Expect(2) = 2e-24
 Identities = 30/33 (90%), Positives = 32/33 (96%)
 Frame = -2

Query: 113 KKEGGTSTLGERSTTESCMLRSGRMNRSRKRIY 15
           +K+GGTSTLGERSTTESCMLRSGRMNRSRK IY
Sbjct: 39  RKKGGTSTLGERSTTESCMLRSGRMNRSRKGIY 71


>ref|YP_001109552.1| hypothetical protein Poptr_cp074 [Populus trichocarpa]
           gi|134093266|ref|YP_001109567.1| hypothetical protein
           Poptr_cp089 [Populus trichocarpa]
           gi|133712113|gb|ABO36756.1| conserved hypothetical
           protein [Populus trichocarpa]
           gi|133712128|gb|ABO36771.1| conserved hypothetical
           protein [Populus trichocarpa]
          Length = 71

 Score = 73.2 bits (178), Expect(2) = 1e-23
 Identities = 37/42 (88%), Positives = 39/42 (92%)
 Frame = -3

Query: 226 M*AGLKKDPRVSRVGPGGSLNAFFFLLIGVISQRLAMARKKG 101
           M AGLKKD RVS+VGPGGSLNAFFFLLIGVIS+RLAM RKKG
Sbjct: 1   MGAGLKKDLRVSKVGPGGSLNAFFFLLIGVISKRLAMVRKKG 42



 Score = 61.6 bits (148), Expect(2) = 1e-23
 Identities = 29/33 (87%), Positives = 31/33 (93%)
 Frame = -2

Query: 113 KKEGGTSTLGERSTTESCMLRSGRMNRSRKRIY 15
           +K+GGTSTLGERST ESCMLRSGRMNRSRK IY
Sbjct: 39  RKKGGTSTLGERSTPESCMLRSGRMNRSRKGIY 71


>ref|XP_002319333.1| predicted protein [Populus trichocarpa] gi|222857709|gb|EEE95256.1|
           predicted protein [Populus trichocarpa]
          Length = 71

 Score = 71.6 bits (174), Expect(2) = 4e-23
 Identities = 36/42 (85%), Positives = 38/42 (90%)
 Frame = -3

Query: 226 M*AGLKKDPRVSRVGPGGSLNAFFFLLIGVISQRLAMARKKG 101
           M AGLKKD RVS+VGPGGSLNAFFFLLIGVIS+RL M RKKG
Sbjct: 1   MGAGLKKDLRVSKVGPGGSLNAFFFLLIGVISKRLVMVRKKG 42



 Score = 61.6 bits (148), Expect(2) = 4e-23
 Identities = 29/33 (87%), Positives = 31/33 (93%)
 Frame = -2

Query: 113 KKEGGTSTLGERSTTESCMLRSGRMNRSRKRIY 15
           +K+GGTSTLGERST ESCMLRSGRMNRSRK IY
Sbjct: 39  RKKGGTSTLGERSTPESCMLRSGRMNRSRKGIY 71


>ref|NP_054982.1| hypothetical protein SpolCp149 [Spinacia oleracea]
           gi|11497590|ref|NP_054997.1| hypothetical protein
           SpolCp150 [Spinacia oleracea] gi|7636156|emb|CAB88778.1|
           hypothetical protein [Spinacia oleracea]
           gi|7636171|emb|CAB88793.1| hypothetical protein
           [Spinacia oleracea]
          Length = 72

 Score = 68.2 bits (165), Expect(2) = 4e-22
 Identities = 38/43 (88%), Positives = 38/43 (88%), Gaps = 1/43 (2%)
 Frame = -3

Query: 226 M*AGLKKDPRVSRVGPGGSLNAFFFLLIGVISQRLAMA-RKKG 101
           M AGLKKD RVSRVGPGGSLNAFFFLLIGVISQRLAM   KKG
Sbjct: 1   MGAGLKKDLRVSRVGPGGSLNAFFFLLIGVISQRLAMVIWKKG 43



 Score = 61.6 bits (148), Expect(2) = 4e-22
 Identities = 29/32 (90%), Positives = 31/32 (96%)
 Frame = -2

Query: 110 KEGGTSTLGERSTTESCMLRSGRMNRSRKRIY 15
           K+GGTSTLGERSTTESCMLRSGRMNRS+K IY
Sbjct: 41  KKGGTSTLGERSTTESCMLRSGRMNRSQKGIY 72


>dbj|BAF50334.1| hypothetical protein [Crucihimalaya wallichii]
           gi|134286725|dbj|BAF50348.1| hypothetical protein
           [Crucihimalaya wallichii] gi|134286888|dbj|BAF50509.1|
           hypothetical protein [Lepidium virginicum]
           gi|134286902|dbj|BAF50523.1| hypothetical protein
           [Lepidium virginicum] gi|134286977|dbj|BAF50597.1|
           hypothetical protein [Lobularia maritima]
           gi|134286991|dbj|BAF50611.1| hypothetical protein
           [Lobularia maritima]
          Length = 111

 Score = 68.6 bits (166), Expect(2) = 2e-20
 Identities = 33/40 (82%), Positives = 35/40 (87%)
 Frame = -2

Query: 446 EKAAINRVSLILPTRKEVHEILFPFCRDQSIGSSRKKNAW 327
           EKAAINR+ LILP+RKE  EILFPF RDQ IGSSRKKNAW
Sbjct: 41  EKAAINRIFLILPSRKEEREILFPFRRDQEIGSSRKKNAW 80



 Score = 55.5 bits (132), Expect(2) = 2e-20
 Identities = 28/30 (93%), Positives = 28/30 (93%)
 Frame = -3

Query: 325 INNSLLGLRPPQSL*TPPISAMGCVYLSIS 236
           INNSLLGLRPPQSL TPPISAMG VYLSIS
Sbjct: 82  INNSLLGLRPPQSLRTPPISAMGRVYLSIS 111