BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027209
         (570 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GAC74009.1| hypothetical protein PANT_9d00381 [Pseudozyma an...    60   2e-07
ref|ZP_06142781.1| tellurium resistance protein [Ruminococcus fl...    56   5e-06
ref|ZP_07061696.1| pseudouridine synthase B, ribosomal large sub...    55   6e-06
ref|XP_001735497.1| nucleoporin p58/p45 [Entamoeba dispar SAW760...    55   6e-06
ref|XP_003170591.1| lovastatin nonaketide synthase [Arthroderma ...    55   8e-06

>dbj|GAC74009.1| hypothetical protein PANT_9d00381 [Pseudozyma antarctica T-34]
          Length = 280

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 42/137 (30%), Positives = 62/137 (45%)
 Frame = +2

Query: 128 SGQDTNFITTNGYSQNVNGFNGGISRGLRQNHPNGGYSTSPQGSSLEFQGNRNESYASNV 307
           +G D      N +S N N  N   S G   N+ +  Y +S   SS     N N SY SN 
Sbjct: 12  AGSDQGKDLINQFSGNKNNNNNNSSSGFGGNNNDDSYGSSNNNSSYG-SSNNNSSYGSND 70

Query: 308 VGLVNENTVGYNVQSNANYGGSFQDNTTGSYTGSVQGFNNSTNGYQGSGGFNMNTNGLPR 487
               N ++ G +  ++++YG +  DN + SY  S +  N+  N Y GSG  N ++ G   
Sbjct: 71  NDNNNSSSYGSSNNNSSSYGSNDNDNNSSSYGSSGRRNNDDDNSY-GSGNNNSSSYGSSG 129

Query: 488 RVGDSSTPMSFGLNSRS 538
           R  D+      G N+ S
Sbjct: 130 RNNDNDNSYGSGNNNSS 146


>ref|ZP_06142781.1| tellurium resistance protein [Ruminococcus flavefaciens FD-1]
          Length = 479

 Score = 55.8 bits (133), Expect = 5e-06
 Identities = 48/171 (28%), Positives = 72/171 (42%), Gaps = 25/171 (14%)
 Frame = +2

Query: 41  SSLTFNQFSTVSAQRIDFY----------NDTQVQNHNLSGQDT---NFITTNGYSQNVN 181
           SS  +  + +++ Q +  Y          N +   N+N +  +T   N    NG++ N +
Sbjct: 55  SSSLYGGYGSMNMQNVGTYLMLEQLMEQGNRSNSSNYNYNSNNTSGFNNQNNNGFNNNNS 114

Query: 182 GFNGGISRGLRQNHPNGGYSTSPQGSSLEFQG--NRNESYASNVVGLVNENTVGYNVQ-- 349
           GFN   + G   N  N G++           G  N+N +  +N  G  N+N  GYN    
Sbjct: 115 GFNNQNNNGFNNN--NSGFNNQNNNGYNNNSGFNNQNNNGYNNNSGFNNQNNNGYNNNNG 172

Query: 350 -SNANYGG-----SFQDNTTGSYTGSVQGFNN-STNGYQGSGGF-NMNTNG 478
            SN N  G      F +     Y  +  GFNN + NGY  + GF N N NG
Sbjct: 173 FSNQNNNGYNNNNGFSNQNNNGYNNN-SGFNNQNNNGYNNNNGFNNQNNNG 222


>ref|ZP_07061696.1| pseudouridine synthase B, ribosomal large subunit [Prevotella
           bryantii B14] gi|299774396|gb|EFI71023.1| pseudouridine
           synthase B, ribosomal large subunit [Prevotella bryantii
           B14]
          Length = 431

 Score = 55.5 bits (132), Expect = 6e-06
 Identities = 37/125 (29%), Positives = 51/125 (40%), Gaps = 8/125 (6%)
 Frame = +2

Query: 128 SGQDTNFITTNGYSQNVNGFNGGISRGLRQNHPNGGYSTSPQGSSLEFQGNRNESYASNV 307
           + Q   + +  GY  N  G++     G   N   GGY+     S      N  E    + 
Sbjct: 47  TSQRGGYQSRGGYGNNRGGYSNNRGGGYNNNR-GGGYNNRGGNSYRPRYNNEEEGGYQSR 105

Query: 308 VGLVNE-----NTVGYNVQS---NANYGGSFQDNTTGSYTGSVQGFNNSTNGYQGSGGFN 463
           VG  N+     N  GYN +    N N GG + +N  G Y  +  GF N+  GY   GGF 
Sbjct: 106 VGYNNDRGGYNNRGGYNNRGGGYNNNRGGGYNNNRGGGYNNNRGGFGNNRGGYGNQGGFR 165

Query: 464 MNTNG 478
            +T G
Sbjct: 166 QHTPG 170


>ref|XP_001735497.1| nucleoporin p58/p45 [Entamoeba dispar SAW760]
           gi|165902497|gb|EDR28301.1| nucleoporin p58/p45,
           putative [Entamoeba dispar SAW760]
          Length = 458

 Score = 55.5 bits (132), Expect = 6e-06
 Identities = 44/164 (26%), Positives = 64/164 (39%), Gaps = 19/164 (11%)
 Frame = +2

Query: 98  NDTQVQNHNLSGQDTNF-ITTNGYSQNVNGFNGGISRGLRQNHPNGGYSTSPQGSSLEFQ 274
           N T   N N +G  + F  TT G+  N +G   G       N+   G      GS++   
Sbjct: 70  NTTGFGNGNTTGFGSGFGSTTGGFGNNNSGLTNGFGNN---NNTKAGVGF---GSTMGGF 123

Query: 275 GNRNE----SYASNVVGLVNENTVGYNV----QSNANYGGSFQDNTTGSYTGSVQGFNNS 430
           GN N      + S   G  N N  G+       +N  +G  F + T   +  +  GF N+
Sbjct: 124 GNNNTFGNTGFGSTTTGFGNNNNTGFGSGFGNNNNTGFGSGFGNTTNTGFGSTTSGFGNT 183

Query: 431 TNGYQG----------SGGFNMNTNGLPRRVGDSSTPMSFGLNS 532
           T G  G          SGGF  N  GL    G+++T +  G  +
Sbjct: 184 TTGLGGGFGSALGNGLSGGFGNNNTGLGGGFGNNNTGLGGGFGT 227


>ref|XP_003170591.1| lovastatin nonaketide synthase [Arthroderma gypseum CBS 118893]
            gi|311345625|gb|EFR04828.1| lovastatin nonaketide
            synthase [Arthroderma gypseum CBS 118893]
          Length = 2312

 Score = 55.1 bits (131), Expect = 8e-06
 Identities = 41/128 (32%), Positives = 59/128 (46%), Gaps = 7/128 (5%)
 Frame = +2

Query: 155  TNGYSQ-NVNGFNGGISRGLRQNHPNGGYSTSPQGSSLEFQGNRNESYASNVVGLVNENT 331
            TNG+   + NG+  G + G    H NG  S    G +    G+ N + ASN+ G  N +T
Sbjct: 1279 TNGHRDGHANGYINGHANGSTNGHTNGHISGYTNGHT---NGHTNGN-ASNINGNTNGHT 1334

Query: 332  VGY-----NVQSNANYGGSFQDNTTGSYTGSVQGFNNSTNGYQGSGGFNMNTNGLPRRVG 496
             G+     N  +N N  G    +T G   G   G+ N       +GG N  TNG+P    
Sbjct: 1335 NGHTSRYTNGHTNGNTNGHTNGHTNGHTNGRTNGYTNGRTNGHSNGGSNGYTNGVPTSGV 1394

Query: 497  D-SSTPMS 517
            D S+TP++
Sbjct: 1395 DLSATPIT 1402