BLASTX nr result

ID: Coptis24_contig00027191 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027191
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004167172.1| PREDICTED: vacuolar amino acid transporter 1...    46   4e-10
ref|XP_004147475.1| PREDICTED: vacuolar amino acid transporter 1...    46   4e-10
ref|XP_002265140.1| PREDICTED: vacuolar amino acid transporter 1...    51   2e-09
emb|CBI21675.3| unnamed protein product [Vitis vinifera]               51   2e-09
ref|XP_002531860.1| amino acid transporter, putative [Ricinus co...    44   2e-09

>ref|XP_004167172.1| PREDICTED: vacuolar amino acid transporter 1-like [Cucumis sativus]
          Length = 436

 Score = 46.2 bits (108), Expect(2) = 4e-10
 Identities = 19/30 (63%), Positives = 27/30 (90%)
 Frame = +1

Query: 1   MHLQLYFVSTGFLILE*DNLHNLFPEIRFE 90
           M+++LY V+TGFLILE DNL+N+FP++ FE
Sbjct: 129 MYVELYLVATGFLILEGDNLNNMFPDVGFE 158



 Score = 42.7 bits (99), Expect(2) = 4e-10
 Identities = 20/41 (48%), Positives = 31/41 (75%)
 Frame = +3

Query: 123 FVIIVTLIIFPSMLLRDLSKLSYLSATGFITSVILIAPLFF 245
           FV++V LII PS+ L +LS LS++SA+G + S I+I  +F+
Sbjct: 170 FVLVVALIILPSVWLDNLSLLSFVSASGVLASAIIIGSVFW 210


>ref|XP_004147475.1| PREDICTED: vacuolar amino acid transporter 1-like [Cucumis sativus]
          Length = 432

 Score = 46.2 bits (108), Expect(2) = 4e-10
 Identities = 19/30 (63%), Positives = 27/30 (90%)
 Frame = +1

Query: 1   MHLQLYFVSTGFLILE*DNLHNLFPEIRFE 90
           M+++LY V+TGFLILE DNL+N+FP++ FE
Sbjct: 125 MYVELYLVATGFLILEGDNLNNMFPDVGFE 154



 Score = 42.7 bits (99), Expect(2) = 4e-10
 Identities = 20/41 (48%), Positives = 31/41 (75%)
 Frame = +3

Query: 123 FVIIVTLIIFPSMLLRDLSKLSYLSATGFITSVILIAPLFF 245
           FV++V LII PS+ L +LS LS++SA+G + S I+I  +F+
Sbjct: 166 FVLVVALIILPSVWLDNLSLLSFVSASGVLASAIIIGSVFW 206


>ref|XP_002265140.1| PREDICTED: vacuolar amino acid transporter 1 [Vitis vinifera]
           gi|147833560|emb|CAN75004.1| hypothetical protein
           VITISV_015127 [Vitis vinifera]
          Length = 406

 Score = 50.8 bits (120), Expect(2) = 2e-09
 Identities = 24/43 (55%), Positives = 32/43 (74%)
 Frame = +3

Query: 114 RVGFVIIVTLIIFPSMLLRDLSKLSYLSATGFITSVILIAPLF 242
           R  FV+I  L+IFPSMLL DLS LSY+SATG  + +I++  +F
Sbjct: 139 RQSFVLITALVIFPSMLLTDLSILSYVSATGVFSCLIILVSIF 181



 Score = 36.2 bits (82), Expect(2) = 2e-09
 Identities = 16/26 (61%), Positives = 20/26 (76%)
 Frame = +1

Query: 1   MHLQLYFVSTGFLILE*DNLHNLFPE 78
           M+ +LY V+ G LILE DNLH LFP+
Sbjct: 101 MNSELYLVAIGLLILEGDNLHKLFPK 126


>emb|CBI21675.3| unnamed protein product [Vitis vinifera]
          Length = 391

 Score = 50.8 bits (120), Expect(2) = 2e-09
 Identities = 24/43 (55%), Positives = 32/43 (74%)
 Frame = +3

Query: 114 RVGFVIIVTLIIFPSMLLRDLSKLSYLSATGFITSVILIAPLF 242
           R  FV+I  L+IFPSMLL DLS LSY+SATG  + +I++  +F
Sbjct: 80  RQSFVLITALVIFPSMLLTDLSILSYVSATGVFSCLIILVSIF 122



 Score = 36.2 bits (82), Expect(2) = 2e-09
 Identities = 16/26 (61%), Positives = 20/26 (76%)
 Frame = +1

Query: 1   MHLQLYFVSTGFLILE*DNLHNLFPE 78
           M+ +LY V+ G LILE DNLH LFP+
Sbjct: 42  MNSELYLVAIGLLILEGDNLHKLFPK 67


>ref|XP_002531860.1| amino acid transporter, putative [Ricinus communis]
           gi|223528510|gb|EEF30538.1| amino acid transporter,
           putative [Ricinus communis]
          Length = 404

 Score = 44.3 bits (103), Expect(2) = 2e-09
 Identities = 19/36 (52%), Positives = 27/36 (75%)
 Frame = +1

Query: 1   MHLQLYFVSTGFLILE*DNLHNLFPEIRFEYSWINV 108
           M+++LY V+TGFLILE DNL NLFP +  E +  ++
Sbjct: 122 MYVELYLVATGFLILEGDNLQNLFPNVDIEVAGFHI 157



 Score = 42.4 bits (98), Expect(2) = 2e-09
 Identities = 20/40 (50%), Positives = 30/40 (75%)
 Frame = +3

Query: 123 FVIIVTLIIFPSMLLRDLSKLSYLSATGFITSVILIAPLF 242
           FVI+V LII P++ L +LS LSY+SA+G + S I++  +F
Sbjct: 163 FVILVALIILPTIWLDNLSILSYVSASGVLASAIILGSIF 202


Top